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chore(deps): upgrade typescript, vitest, and MCP SDK to latest (#633)
typescript 5.9.3 to 7.0.2, vitest 4.1.10 to 5.0.3 (plus @vitest/coverage-v8 and @fast-check/vitest 0.5.0 for peer compat), @Modelcontextprotocol/client and server 2.0.0 to 2.3.1. Migrate the removed describe.sequential to concurrent:false and regenerate package metadata and product catalog. Also restore byte-faithful reads in parseCliJsonInput: the safeJson migration dropped the fatal UTF-8 check from #613. Vitest 5 requires Node 22/24/26+, so verify on Node 24 (repo-pinned toolchain).
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