Reuse the semantic array-index parser so leading-zero keys stay unresolved instead of selecting positional arguments. Preserve canonical indices, literal fallback and dynamic-key uncertainty.
Refs #4242, #4272
Co-authored-by: Liu Jie <maxazure@gmail.com>
Use the default home registration and personal skill roots for an empty profile override. Share marker and skill path resolution while preserving nonempty caller paths, backups and idempotence.
Refs #4262, #4270
Co-authored-by: Polly Labs <pollychen.lab@gmail.com>
Own CDP transports from admission through observed close, retain failed
owners for retry, and keep active peers separate from pending cleanup.
Preserve primary errors and completed facts through final cancellation.
Forward passive Electron CLI cancellation and dispose browser, runtime and
scenario owners from CLI and MCP shutdown.
Refs #4255, #4256, #4257
Distinguish call-form require from TypeScript import-equals before resolving
inventory paths. Probe CommonJS files before indexes and honor package main
without requiring an index. Retain selected manifest directory identities and
reuse the path lookup owner for canonical ambiguity.
Validated with source/reader tests and a public CLI fixture controlled by the
pinned Node loader. Windows no-follow reader behavior remains unverified.
Refs #3895, #3896, #3973, #4017.
Co-authored-by: hhang <169027046+xu91102@users.noreply.github.com>
Co-authored-by: IssueHunter Worker <issuehunter@users.noreply.github.com>
Return unknown before fingerprinting incomplete accessibility trees. Keep
known structural changes comparable when only text permission is absent,
and preserve independent changes in other dimensions.
Validated through seven CLI cases and existing network comparison semantics.
Refs #3385, #3824.
Co-authored-by: Liu Jie <maxazure@gmail.com>
* fix(cleanup): preserve owner recovery instructions
Keep cleanup remediation through combined errors and direct or managed one-shot analysis while retaining primary diagnostics.
Refs: #4227
* fix(hopper): recover late startup and retained cleanup
Authenticate initial and cleanup handshakes through the same identity owner. Expose startup and cleanup activity, retain health after target retirement, and expire abandoned unauthenticated listeners without timing out authenticated work.
Refs: #4227
* fix(providers): retain composite lifecycle facts across retries
Preserve observed child health with incomplete peer coverage, retry only unresolved clients, and retain all child cleanup recovery actions.
Refs: #4233
* fix(process): honor cancellation through capture cleanup
Check the request signal after cleanup and before final publication, retaining completed observations under typed cancellation.
Refs: #4005
* fix(native): preserve failed LLDB launch ownership and exit proof
Publish failed-launch process identity and observed exit separately from object validity. Retire only the exact owned process and retain uncertainty when exit cannot be established.
Refs: #4232
* fix(native): honor cancellation after trace finalization
Check cancellation after runtime-root cleanup and retain collected trace observations as partial cancellation evidence.
Refs: #4009
* fix(cli): preserve analysis results when provider cleanup fails
Reuse the existing one-shot finalizer across thirteen command families to retain completed Evidence and primary diagnostics on close failure. Cover success, denied cleanup, and combined primary/cleanup failure through the public CLI.
Refs: #3935
* docs(lifecycle): define completion invariants and regression scenarios
Document distinct ownership/readiness/exit facts, late cancellation and atomic publication boundaries, partial child cleanup, and diagnostic retention. Link representative regressions and route contributor guidance through AGENTS.md.
Refs: #4227
* fix(session): retain run identity through pending cleanup
* fix(cli): preserve original cleanup resource diagnostics
* fix(native): retain completed facts through finalization failure
* fix(providers): report retained cleanup paths at their owners
Validate decimal tokens at the CLI owner before safe-number parsing. Apply the same rule to positional indexes/generations and repeated record selectors, retaining leading-zero decimals and canonical MCP inputs.
Refs #4182
Co-authored-by: Arjun Prabhulal <arjun.prabhulal@gmail.com>
Keep malformed JEB-only timeouts isolated from shared CLI/MCP startup while strict registration and JEB configuration checks remain authoritative. Cover built CLI discovery and the production stdio MCP refusal and peer requests.
Original contribution by @ShuaixinHuang.
Co-authored-by: ShuaixinHuang <1836656514@qq.com>
The reference-source resolver probed only JavaScript and TypeScript
extensions, so require("./data") stayed unresolved when the tree held
data.json, which Node's CommonJS loader selects. Resolution now uses
extension slots: a requires edge also tries X.json after X.js and
before any directory index, and X/index.json after X/index.js,
including a package main. ESM and TypeScript imports still need an
explicit .json extension.
Fixes#3915
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
Expose filtered canonical module identities, retained source-range counts and mixed support through the existing shared CLI/MCP analysis view. Preserve full-item access, source selection, provenance and partial coverage while allocating only the selected page.
Verify exact facts and CLI/MCP identity on shipped Obsidian, record complete-task BPE/resource measurements and reuse owned-process supervision for optional tokenizer cleanup.
Fixes#4092
Part of #4027; decision #4091.
Co-authored-by: Kaoru0822 <208281322+kaoru0822-kitauji@users.noreply.github.com>
* fix: select caller paths through symlinks and .. as the filesystem does
CLI adapters, binary target resolution, the reverse-engineering service
and the objdump and Rizin command builders made caller-selected paths
absolute with path.resolve, which collapses `link/..` lexically. On
POSIX the filesystem follows `link` first, so these commands inspected,
hashed or launched a different file and returned internally consistent
Evidence for it.
absoluteCallerPath now owns that step: on POSIX it prefixes a relative
path with the working directory and keeps an absolute path as spelled;
on Windows, where `..` resolves lexically, it keeps win32.resolve.
Fixes#3864Fixes#3911Fixes#3912
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
* fix: keep firmware, WASM list and output-root paths on the selected file
Review follow-up. The CLI already passed firmware and WASM paths through
absoluteCallerPath, but snapshotFirmware and SafeOutputTree.create
re-resolved them lexically, and the WASM glue and candidate lists still
used resolve, so those inputs could still select a sibling file or
create output beside the intended directory.
absoluteCallerPath now also drops `.` segments and repeated or trailing
separators on POSIX, which never change the named file, so selected
paths such as `./module.wasm` keep matching their glue references
exactly. Every `..` is still left for the filesystem.
SafeOutputTree keeps host path syntax; its platform argument selects only
the Windows name policy.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
* fix: keep directory requirements and relative cwd in caller paths
Review follow-up. absoluteCallerPath stripped a trailing `/` or `/.`, so
`file/` selected the regular file instead of failing with ENOTDIR; it
now keeps one trailing separator. A relative cwd option was appended to
the root; it is now made absolute without collapsing `..`. WASM glue
matching resolved local literals lexically, so a module selected through
`link/..` matched only by basename; the adapter now compares both sides
through absoluteCallerPath and still reports each candidate as given.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
inspect-macho projected an empty Mach-O segment or section name as the
display label "unknown", so an exhaustive segment inventory for an
ordinary MH_OBJECT reported a segment literally named "unknown" while
the raw LC_SEGMENT_64 field showed "". Object files place every section
in one unnamed segment, so the empty name is a source value. Segment and
section names are now reported exactly as observed.
Fixes#3875
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
inspect-macho listed the LC_ID_DYLIB command of a dylib as a dependency,
so every dylib reported a self-dependency and an inflated exhaustive
count, while trace-dylib-resolution correctly treats that name as the
image identity. The dependency collector now skips LC_ID_DYLIB; the
command, with its install name, remains in the raw load commands.
Fixes#3872
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
`inspect-macho` stored each `otool -l` row in a flat record, so a key
printed more than once kept only its last value. A two-string
LC_LINKER_OPTION lost `-framework` and kept `#2 Foundation`, and a
multi-tool LC_BUILD_VERSION kept only its last tool, while the
collection still claimed exhaustive coverage.
Linker-option strings are now keyed by otool's own `string #n` label
with the exact option text and must match the declared count. Any other
repeated key is labeled `key #n` in print order. Dylib encoding checks
read the parsed rows, so repeated `options` rows are still rejected.
Fixes#4008
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
* fix(reference): select a package main before its directory index
import-reference-source resolved a relative directory import such as
require("./dep") from path candidates alone, so it reported dep/index.js
as the internal, parsed dependency even when dep/package.json declared
"main": "actual.js". Node loads actual.js.
parseReferenceSourceEntries now reads each inventoried package.json once.
When an internal specifier resolves through a directory index, a
non-empty string main is loaded first, as a file and then as a directory
index, as Node does. A main whose target is absent falls back to the
index, matching Node's legacy fallback. An unreadable or invalid
manifest leaves the relationship unresolved instead of asserting the
index.
Fixes#3383
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
* fix(reference): resolve package main the way path.resolve does
A trailing separator in main ("lib/") kept directory intent, so the
declared entry selected lib/index.js where Node loads lib.js. An absolute
main was joined under the package directory instead of leaving the
imported root. Strip trailing separators after joining, and report an
absolute main as unresolved. Both cases join the Node-oracle CLI test.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
* fix(native): retain valid Objective-C properties beside a malformed record
readObjcPropertyList decoded a whole property_list_t in one operation.
When a later entry's name pointer was unmapped, the list-level catch
discarded the properties already decoded. An empty property name passed
decoding and then failed schema validation of the whole result, so
inspect-native-dispatch-metadata exited 1 with no metadata.
Each property_t entry is now decoded on its own. A failing entry, or an
empty name, becomes a property_decode_failed issue at the entry address,
and sibling properties are retained. Incomplete-attribute issues also
report their entry address. List-header failures still fail only that
list.
Fixes#3336
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
* test(native): cover property record isolation on every platform
Move the synthetic Objective-C property Mach-O into a shared fixture and
decode it through decodeAppleDispatchMetadata in a portable test, so
Linux and Windows runs also catch a regression that drops valid sibling
properties. The macOS CLI cases keep exercising the built command.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
Replace fixed Linux Hopper release pins with current vendor feed metadata,
complete detached-PGP package verification under the stable publisher primary
key, and authenticated package evidence for offline admission. Share parsed
publisher facts across approved setup, doctor and the pre-execution guard.
Preserve existing ownership, cancellation, private-display and cleanup rules.
Fixes#3577
Normalize empty XDG settings, preserve backups during approved cache repair,
and retain publisher cleanup through cancellation and shutdown. Exercise cold
offline verification without reusing process-local proof state. Serialize
approved cache publication across processes, restore old evidence on failure,
and share the existing lease owner from process without changing its identities.
Validation: 438 focused tests (six platform-related skips), full static/documentation checks, real Ubuntu
24.04 official Hopper 6.6.0 setup/CLI/MCP, offline ordinary-user admission,
launcher mutation rejection, and cold/warm verification measurements. Official
RPM metadata mismatch is tracked separately in #3578 and fails closed.
BREAKING CHANGE: Older Linux Hopper builds admitted by the fixed allowlist
now require retained publisher-signed package evidence or an approved update
to the current public demo. Update explicit HOPPER_LAUNCHER_PATH values when
migrating; the live feed exposes only its current release.
Co-authored-by: Kaoru0822 <208281322+kaoru0822-kitauji@users.noreply.github.com>
Co-authored-by: gensokyo-dev <342580529+gensokyo-dev@users.noreply.github.com>
An Objective-C property attribute string whose quoted class name never
closes, such as T@"NSString, was treated as complete. The missing N and
R were then read as the Objective-C defaults, so the property was reported
atomic and read-write, and objc_properties_categories coverage stayed
complete. The documented semantics require null flags for incomplete
attribute metadata.
The attribute splitter now reports whether every quote closed. An
incomplete string leaves atomicity and any unestablished read-only value
null, while explicit N or R tokens remain established and the raw type is
preserved. Each affected property adds a property_attributes_incomplete
issue, which marks the facet partial.
Fixes#3345
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
* fix(cli): accept --flag=value for global output flags
`rea <command> --format=json` failed with "Unknown flag: --format".
`--filter-output=...`, `--token-limit=...` and `--token-offset=...`
failed the same way. Incur reads these global flags only in spaced form,
so the equals form fell through to the command parser. Command options
already accept both forms, and `rea mcp doctor` parses `--format=` itself.
A valued output flag with no value (`--format` last, or `--format=`)
also reported the flag as unknown with code UNKNOWN.
normalizeCliOutputArguments, in the module that owns output-argument
interpretation, now splits the equals forms of the four valued output
flags. The entry point passes the normalized argv to rea's output
validation and to Incur, so both read the same effective values. A
missing value now fails with MISSING_OUTPUT_VALUE and names the flag.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
* fix(cli): detect missing output values while parsing output flags
The missing-value check scanned argv again after parsing, so it also
checked tokens the parser had already consumed as values. For example,
`--filter-output --format` selects the field `--format`, yet the second
scan reported `--format` as missing a value. parseCliOutputArguments
now records the first valued flag it skips for lack of a value, in the
same pass that consumes values.
Cover normalizeCliOutputArguments directly: values containing `=`, empty
values, and command options that only share a prefix. Export it in the
dispatcher test's runtime stub as well.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
plutil writes years past 9999 and negative years in a form the pinned
XML decoder cannot parse, and binary plists can hold dates outside the
JavaScript Date range. The decoder returns an Invalid Date. Its
projection's toISOString() call then threw, so inspect_plist failed the
whole plist as "unreadable_output" with a `rea doctor` remediation.
Keyed archive inspection and Interface Builder decoding rejected the
archive in the same way.
projectPlistValue, the shared projection, now reports such a date as
{ "$plist_type": "date", "iso8601": null } and counts it. inspect_plist,
keyed archive inspection and Interface Builder decoding each add a
counted limitation, as they already do for non-finite reals.
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
resolveInternalSpecifier offered posix.join(dir, "index") as the
second candidate, ahead of every extension. With both dep.js and an
extensionless dep/index present, require("./dep") therefore resolved to
dep/index, a file that neither Node nor TypeScript ever selects.
Directory candidates now carry an extension. File and index ordering is
otherwise unchanged, so Node-validated cases such as dep/index.js
winning over dep.cjs keep their meaning.
Fixes#3381
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
* fix(cli): stop quietly when the stdout reader closes early
`rea ... | head` crashed once head closed the pipe. TOON and YAML output
raised an unhandled EPIPE 'error' event with a Node stack trace. JSON
output reported {"code":"UNKNOWN","message":"write EPIPE"} on stderr.
Both exited 1, as if the analysis had failed.
The CLI entry point owns process.stdout, so it now treats EPIPE as the
reader declining the rest of the output. It stops writing, suppresses
the failure report and exits 141 like a SIGPIPE-terminated writer, also
when Incur exits through its own failure path. Other stdout errors are
handled as before.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
* fix(cli): guard mcp doctor output and cover midstream reader closure
The closed-reader guard was only installed for ordinary CLI commands. As a
result `rea mcp doctor | head` still crashed on EPIPE. The guard now lives
in one entry-point function shared by both CLI branches; MCP stdio keeps
its own lifecycle.
The tests now also close the reader after the first chunk of a 4 MiB
streamed JSON result, so later writes in writeJsonOutput are covered.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
inspect_plist rooted every file target at the file's own directory, so a
program file under App.app/Contents/MacOS defaulted to
Contents/MacOS/Contents/Info.plist and --relative-path resolved from MacOS/
instead of the app root the CLI documents. A selected plist file likewise
looked for <dir>/Contents/Info.plist instead of reading itself.
A program file directly under a bundle's Contents/MacOS now roots at that
bundle, and a plist artifact target is its own default plist. The missing
default message names the default plist rather than Contents/Info.plist.
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
Support case-insensitive environment value lookup in ClientRegistrationIdentity while preserving JavaScript property order precedence with findLast(). Add unit regression coverage for ambient uppercase npm variables on Windows. Isolate USERPROFILE in cliSetup tests so child processes do not touch the host profile directory. Harden JSON decision extraction in runJourney against ConPTY trailing ANSI escape codes. Deterministically sequence multiselect prompt navigation before confirmation. Filter ambient runner variables case-insensitively before launching interactive setup completion tests.
Correct two independently reproduced CI fixture preconditions: close the real Rizin child's stdin before its readiness frame, and provide scoped Linux loader evidence for the Hopper doctor shell fixture. Preserve original timeouts, rejection checks, path spelling, launch prevention and cleanup.
Current-head CI passed, including both complete reverse-tools mutation passes and 1,273 unique portable test files (14,521 passed, 126 skipped, zero failures). Each issue retains its own branch/commit; the validated integration tree includes the Hopper fix from #3410. That duplicate PR can close after the same code is verified on main.
Fixes#3295Fixes#3406
Co-authored-by: Kaoru0822 <208281322+kaoru0822-kitauji@users.noreply.github.com>
Retain scenario selection limitations independently of known changes. Compare known status, MIME and byte observations for each redirect hop without inventing missing facts.
Refs: #3172, #3173
Consume the same-container inventory lookup before treating a missing package.json projection as absent. Unknown metadata prevents index fallback and unsupported bare-package exports resolution; restored metadata selects its declared main or import/require export.
Validation: owner same-container/restored controls and actual ASAR CLI missing/restored package-manifest workflow. Completes the P1 review finding on #3278 that remained after the earlier missing-companion projection fix.
Fixes#3213
Related: #3278
Co-authored-by: Geronimo <varungore1@gmail.com>
Centralize canonical system/user and deterministic renamed-bundle path facts. Reuse the installer destination and honor the same local candidates in doctor and runtime; scan renamed bundles only after canonical candidates fail. Preserve explicit path spelling and exclusive selection. Homebrew command probing remains doctor-only with explicit runtime configuration guidance.
Validation: owner, config, setup and doctor tests cover canonical priority and renamed paths; public CLI verifies explicit path preservation without launching Hopper. No real Hopper analysis claimed.
Fixes#3054
Related: #3085
Co-authored-by: Vinícius DS Andrade <95101505+viniciusdsandrade@users.noreply.github.com>
Co-authored-by: Kaoru0822 <208281322+kaoru0822-kitauji@users.noreply.github.com>
Preserve requested adb reinstall mode as replace_requested and report replaced as null when no prior package-state observation exists. Keep install Success/Failure, raw output and host digest, with an explicit Evidence limitation; add no device queries.
Validation: stateful CLI fake distinguishes fresh/existing installs and checks exact version/install commands, plus provider and MCP schema controls. No real-device verification claimed.
Fixes#3166
BREAKING CHANGE: install_adb_package now requires replace_requested and exposes replaced as nullable rather than claiming the selected mode was an observed replacement.
Merge direct same-call nested member facts into symbolic wrapper results using canonical deduplication and ordering. Preserve unknown spread coverage rather than losing known member paths.
Validation: bounded source cases and public CLI/stdio MCP spread/no-spread controls. The existing 125,000-member stress case exceeded the 384 MiB local cap and was stopped without increasing the limit; that capacity case remains unverified locally.
Fixes#3212
Preserve missing ASAR companion occurrence identity, declared size and unknown content in graph nodes and resolution limitations. Apply URL text semantics once for ESM lookup while preserving literal CommonJS paths and original specifiers. Keep CJS wrapper var bindings and assignment history, recognizing only untouched wrapper redeclarations.
Validation: real ASAR producer workflow and CLI/MCP path/coverage cases; semantic reassignment controls. Context7 Node documentation and direct Node wrapper execution confirm wrapper behavior.
Fixes#3213Fixes#3214Fixes#3223
Related: #3278, #3254
Co-authored-by: Geronimo <varungore1@gmail.com>
Co-authored-by: Paolo Valletta <paovalletta@hotmail.it>
Render a terminal dry-run plan only after setup admission succeeds. Blocked skill or registration plans use the existing remediation output. Reuse one bounded PTY helper for success and refusal workflows; verify no linked target or client configuration changes.
Follow-up-to: #3108
Validation: public CLI PTY tests and RPC owner controls pass (77 tests); build and static checks pass.
* perf(artifacts): overlap bundle magic reads while enumerating dylib roots
trace_dylib_resolution opened every file of an app bundle one at a time
to read its Mach-O magic (Keynote: 35,971 files, 23 Mach-O images).
Keep up to eight reads in flight while the directory walk continues,
settling them in walk order so classification and failure precedence
match the sequential scan. Keynote 4.20 s -> 2.78 s.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
* test(artifacts): pin ordered-read failure precedence and cleanup
Extract the overlapped magic-read queue into consumeWithOrderedReads and
test its ordering, concurrency bound, failure precedence, enumeration
close and read settlement with controlled promises.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
Advertise the nonnegative outline-depth bound after safe-range conversion, verify it against the runtime parser and Ajv 2020, and describe every retained view family and both supported recorded-core architectures. Reuse the existing CLI schema fixture instead of three duplicate capture helpers.
Fixes#3211Fixes#3194Fixes#3167
Co-authored-by: Anankequ <2983852214@qq.com>
Co-authored-by: gongfpp <1360187968@qq.com>
