* fix(setup): report host-owned cleanup resources alongside the primary's
SetupHost.close documents that it reports the resources a setup host still
owns, but its contract returned only a string. runSetup therefore built the
ProviderCleanupError from the primary failure's cleanupResources alone, so a
resource the host failed to release reached the projection only inside a
free-text reason while the error asks the caller to review the reported local
resources.
Return a SetupCloseReport instead. closeSetupResources absorbs the structured
resources of any cause that reports them, through
ArtifactReaderFailure.cleanupObservation, and leaves opaque failures
message-only so no resource name is invented. runSetup then unions the host's
resources with the primary's before building the typed cleanup error.
Two boundary tests read the close result directly: the skill-cleanup case now
asserts the retained backup path in the report reason rather than in a bare
string, and the shared ownership helper takes an opaque close result because it
only ever awaits undefined from either host it is given.
Validation: RED then green in src/application/Setup.recovery.test.ts, where
the new case previously received only the primary resource; 116 tests across
the seven Setup and cleanup-ownership suites pass; tsc --noEmit over the
changed set, its setup callers, and both boundary tests exits 0; oxlint
reports 0 errors; oxfmt --check is clean; verify:module-boundaries passes.
The two failures in src/setupEnvironment.test.ts reproduce identically on
pristine bded9c628 with this change stashed.
* fix(setup): preserve cleanup ownership through host reports
* fix(setup): bind finalization reports to cleanup owners
* fix(setup): retain live resources in returned cleanup views
* fix(setup): preserve completed cleanup and exact installer resources
* fix(setup): retain delegated cleanup across authority changes
* fix(setup): compose callback and source cleanup authorities
* fix(setup): retain producer cleanup failure reasons
* fix(cli): render structured setup cleanup resources
* fix(setup): separate failure evidence from cleanup ownership
* fix(setup): normalize close failures and unify lease binding
* fix(setup): preserve direct lease resource attribution
---------
Co-authored-by: gensokyo-dev <342580529+gensokyo-dev@users.noreply.github.com>
Remove the reconstruction-only request schema and consume the canonical parsed
JavaScript application input. Production already owns parsing at the service
boundary; direct test seams now use that same schema instead of a weaker path
contract. Preserve format, filesystem, source selection and lifecycle validation.
Add a NUL-path regression for canonical admission and typed input-error
projection. Verified 63 focused cases plus static, build, docs, discovery and
duplication checks; no target execution or real-provider claims.
* perf(entropy): separate physical reads from report blocks
* test(entropy): type the injected positional short-read boundary
* test(entropy): retain full catalog transport capacity in task probe
* docs(perf): record real entropy task costs and limits
* docs(perf): record latest-main entropy qualification
* feat(pe): inspect import and delay-load tables
Add inspect_pe_imports / inspect-pe-imports to read PE32/PE32+ import
and delay-load directories without executing the image. The report keeps
DLL names, named and ordinal functions, ILT/IAT RVAs, and a pefile
import hash of the standard import table. A missing directory is
observed absence, not proof the image never imported APIs.
* fix(pe): default PE import fixture options
Allow peImportImage() without an argument so CLI and filesystem tests
can use the KERNEL32 sample without repeating an empty options object.
* test(pe): keep import path cases on the dedicated MCP contract
inspect_pe_imports already rejects relative MCP paths in its own
boundary test. Leave the shared absolute-path matrix to tools whose
handler issue projection matches that suite's expected shape.
* fix(native): index virtual-to-file mapping lookups
mappedFileOffset scans every mapping twice per span, so a parser that
translates one span per table entry costs sections x entries. Add
fileMappingLookup, which builds an O(n log n) interval index once and
answers each span in O(log n) with the same accept, reject and
translation results. A differential test checks it against
mappedFileOffset over randomized overlapping mappings and zero fills.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Ra7LM2NyQ7DumdssxbUq5g
* fix(pe): report partial import evidence and exact pefile hashes
- Withhold imphash with an explicit reason whenever the standard import
table is partial (unreadable names or thunks, missing tables), or when
pefile 2024.8.26 would hash a different row sequence: invalid or
truncated names, ordinal 0, descriptors without functions, tables its
bounds or repeat/spread heuristics discard, and its 8192-thunk import
symbol cap. Delay-load issues do not withhold it.
- Hash ordinal imports with pefile's complete ordlookup tables and its
ord<decimal> fallback instead of declining unmapped ordinals.
- Report a nonterminal descriptor whose FirstThunk is zero, and a
delay-load descriptor whose IAT or INT RVA is zero, as malformed_entry
partial coverage instead of a complete empty inventory.
- Directory evidence lists the file spans actually consumed for the
descriptor array and terminator; discontiguous mappings produce
separate spans and separate Evidence ranges.
- Carry exhausted limits as PeImportLimitFailure.limit and derive
recovery from it; the fixed 16 MiB retained-text ceiling reports a
fixed allowance instead of max_file_bytes advice.
- Translate RVAs through the indexed mapping lookup and yield with a
cancellation check every 1024 table entries.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Ra7LM2NyQ7DumdssxbUq5g
* fix(pe): read only own ordinal tables for DLL names
DLL names such as constructor and __proto__ pass pefile's name rule but
resolved inherited object members, throwing before the ord<n> fallback.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01Ra7LM2NyQ7DumdssxbUq5g
* fix(native): preserve PE import facts and prove hash compatibility
* test(native): verify PE import workflows and measured costs
* refactor(native): narrow PE facts across the container union
* docs(native): record integrated PE import validation
* fix(native): bound every PE import RVA span
* docs(native): measure RVA guard completed workflows
* fix(pe): reconcile import coverage with retained rows
* fix(pe): retain partial imports at descriptor mapping gaps
---------
Co-authored-by: Matt Van Horn <455140+mvanhorn@users.noreply.github.com>
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
Co-authored-by: gensokyo-dev <342580529+gensokyo-dev@users.noreply.github.com>
Retire the unused graph serialization facade and use one typed query implementation after canonical request admission. Migrate tests to the owning schemas while preserving graph commitments, Unicode transport, provenance, uncertainty, traversal and reconstruction controls.
* feat(javascript): link assignment right-hand sides to their writes
A declaration carries its value forward, but a later assignment to a
variable, a property or through a compound operator stopped the forward
trace at the right-hand-side read. The semantic IR now records one
syntactic assignment flow per simple assignment target (ranges, operator,
owning callable), and the graph projection connects each retained read
of the right-hand side to the write occurrence through a defines
relation. Compound assignments also consume the previous value of the
target; the written value itself stays unknown, keeping the boundary of
#4342 intact.
Fixes#6193
* fix(javascript): preserve computed key assignment ownership
* test(javascript): retain nested callback assignment ownership
* docs(javascript): record assignment influence verification
* test(mcp): isolate mocks and acknowledge cancellation boundaries
* test(javascript): retain CLI diagnostics and current-main verification
---------
Co-authored-by: gensokyo-dev <342580529+gensokyo-dev@users.noreply.github.com>
Use the authoritative scenario schema directly in all 25 test consumers. Preserve unknown-input annotations and every lifecycle, permission, normalization, identity and cleanup assertion; retain the separate branded capture validation boundary.
Remove the unused estimator export. Check storage and escaping through typed authentication refusals with fixed allowances, preserving bounded traversal and acceptance controls.
Remove the undocumented name alias from list_names fallback and validate the canonical value rows with the existing strict policy. Keep record defaults in the public input contract and require explicit decoder budgets. Preserve provenance, partial coverage, source coordinates and typed failures in active application and MCP tests.
Pass the caller-selected input field to the shared managed parse-failure
owner. Derive filename and field from one comparison selection, reporting
leftPath or rightPath while ordinary inspection continues to report path.
Preserve typed input classification and completed-left partial Evidence.
Replace weaker direct malformed-input cases with a compiled CLI workflow
covering both sides, the healthy comparison, and sibling inspection.
Document the input-attribution contract.
Validation: the public regression reproduced the generic path issue;
focused CLI, comparison and shared-reader controls passed after repair.
No managed assembly or external analysis provider was executed.
Use one containing-procedure parser beside its declared schema for
navigation, address facets, and feature trace references. Keep the trace
cache and reference type bound to parsed facts, returning typed malformed
output before SDK projection instead of passing unchecked JSON onward.
Retain same-address search alternatives such as Kuna's distinct string
encodings. References identify target addresses, so observe and emit each
target once while retaining duplicate rows from the provider observation.
Remove address-only match collapse and redundant residual deduplication.
Document these semantics.
Validation: regression-first runs reproduced four malformed-resolution
failures and three alternative/reference-replay failures. Focused MCP and
consumer controls passed after repair. Real native engines were not run.
Remove the test-only selection/projection facade and its unused synthesized binding scan. Keep lexical and identity controls at their active owners, with combined behavior covered through EnhancedTools.
Successful worker transport can carry an explicit failed parser status
with no semantic projection. Preserve that producer fact through the
shared source-availability interpretation used by full and incremental
graph construction, rather than dropping the source's semantic scope.
Retain the module when capacity permits, per-family incomplete-module
unknowns, and unknown omitted extents. Preserve existing operational
failure reasons and limits without classifying syntax as resource loss.
Document this coverage behavior.
Validation: regression-first run had 3 expected failures; all 22 selected
projection and public CLI source-selection/HTML cases passed after repair.
No JavaScript target execution or live external provider was involved.
* feat(ghidra): bound one procedure's decompile without closing the session
Fixes#5340
* fix(ghidra): report decompile limit as a request timeout
Keeps BinarySession from marking every Ghidra operation unavailable after one procedure's decompile reaches the limit, and names the MCP tool-call deadline in the remediation.
* fix(ghidra): budget the decompile limit and report cancellation-closed sessions
Adds REA_GHIDRA_DECOMPILE_TIMEOUT_SECONDS to the derived Codex/Kimi tool deadline and forwards it through setup. Marks a remote failure that settles after caller cancellation so the timeout projection no longer promises session reuse.
* feat(ghidra)!: default analyze_function to a retained summary
analyze_function was the one analysis tool never wired into REA's
detail: summary|complete convention, so it always returned the complete
native dossier inline (0.2-10 MB, dominated by value-flow and
references). Agents on tool-result-capped harnesses never reached the
pseudocode.
Add `detail` to analyze_function, defaulting to summary: return a
compact dossier (procedure identity, pseudocode size, facet counts,
value-flow availability) and retain the complete dossier Evidence in
the session. Page pseudocode, references, assembly and value-flow
through normalized_result.parent_evidence_id with inspect_analysis_view,
which already projects every native facet. detail: complete returns the
full dossier inline as before. Delivery detail never reaches the
provider or Evidence identity.
BREAKING CHANGE: analyze_function now defaults to the compact summary
view instead of the complete dossier inline. Pass detail: "complete"
for the previous behavior.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb
* feat(cli): expose analyze_function detail on the function command
Wire `rea function` into the shared CLI detail-delivery convention
(--detail, --evidence_output) so the CLI and MCP adapters offer the same
summary | complete choice for analyze_function. Summary delivery writes
the complete dossier Evidence to a bundle and returns the compact
summary view; it fails before analysis when --evidence_output is
missing, so no provider work is wasted. The CLI default stays complete
because a one-shot command has no in-process Evidence retention.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb
* refactor(ghidra): harden analyze_function summary after independent review
FlatlineRoundtable cross-model review (6 lanes) converged on the summary
projection's availability semantics being underspecified. Document that
facet_availability is authoritative over raw pseudocode length, that
code_units are UTF-16 (the unit inspect_analysis_view pages by), and that
value_flow.truncated is meaningful only when value-flow is available.
Parenthesize the nullish-coalescing/comparison for clarity. No behavior
change; declined claims (value-flow "truncated collapse", unresolved_calls
dead code) were schema-impossible or already correct.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb
* test(ghidra): cover analyze_function detail wiring on both adapters
Close the roundtable's top convergent finding: the summary path had only
domain-projection coverage, not the server/CLI wiring where the breaking
behavior lives.
MCP server (registerEnhancedTools): the default delivers a retained
summary whose complete parent is recorded for paging; delivery detail is
stripped before the provider request; detail: complete returns the full
dossier inline; a registration without retention rejects a summary
request before any provider work.
CLI (rea function): the default returns the complete dossier; --detail
summary without --evidence_output fails before analysis; with the bundle
sink it returns the compact summary and writes the complete Evidence
bundle.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb
* fix(ghidra): keep analyze_function delivery detail out of provider inputs
Address the five automated review findings on #5660.
P1: `detail` lived in the shared enhancedInputSchemas.analyze_function, so
inspect_native_api composed `{procedure, detail: "summary"}` and the strict
Ghidra analyze_function schema rejected it. Delivery detail is now owned by
the analyze_function MCP tool contract; the handler separates it before any
provider call, and executeFunctionAnalysisEvidence parses the provider input
only. The MCP regression test validates provider input exactly as the
production Ghidra client does and exercises inspect_native_api.
P2: the analyze_function summary Evidence now carries the parent's
relationship_coverage like native facet views, so partial or unknown
caller/callee discovery is not reported as complete.
P2: the summary reports the dossier's declared facet_availability, nulls the
counts of facets the provider declared unavailable, and lists each reason in
unknowns, so Kuna's empty references, comments and basic blocks are not
mistaken for observed absence.
P2: inspect-analysis-view evidence-file sources accept the Evidence bundle
that --evidence_output writes, selecting a record with source.evidence_id
when the bundle holds several; the CLI test reads the saved bundle back
through that route.
Tests that assert the complete dossier over public analyze_function now pass
detail complete, and the oversized-dossier test asserts the summary view it
previously expected to be unsupported.
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb
* fix(ghidra): keep omitted function facets unknown in the summary
The analyze_function summary coerced an omitted unresolved_calls record to
a count of 0 while the native facet view reports the same dossier as "not
recorded", and it carried no counts at all for the pageable
swift_string_literals facets. Count optional records as null when the
dossier omits them, name them in unknowns, and add nullable counts for both
Swift literal facets. The summary Evidence envelope also dropped the
function address: createAnalysisViewEvidence now derives one function-view
predicate for both the address location and relationship coverage.
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb
* fix(scripts): request complete analyze_function dossiers in real-provider checks
The real-provider check scripts call analyze_function over MCP and then
consume the complete dossier: requireFunctionDossier, functionDossierSchema,
.procedure/.pseudocode reads, operation assertions, compare_functions inputs
and the oversized-dossier rejection path. The summary default broke them.
Every such call site now passes detail: "complete". Provider-direct callers
are unchanged because detail is an MCP contract field; the admission-error
sites stay unchanged because provider failures return before the summary
branch.
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb
* fix(ghidra): keep unavailable value-flow counts unknown in the summary
summarizeDossier coerced the five value_flow_* counts to zero when
native_value_flow was null (IDA, Kuna) or declared unavailable (Ghidra),
so the summary reported empty collections while value_flow.available said
otherwise. The counts are now null unless value flow is available, with the
reason already named in unknowns.
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb
* fix(evidence): budget authentication headroom by file shape and serialized size
The evidence-file headroom reserved two parsed copies, calibrated for one
record, and charged strings at two bytes per character. Bundle
authentication additionally holds the schema-parsed bundle, the re-parsed
records and two JSON.stringify results, which expand control characters and
lone surrogates sixfold: a bundle whose raw_result is a million NUL
characters estimated at 2 MB parsed but needed 12 MB of serialized text.
The budget now has a parsed term and a serialized term per file shape, owned
by EvidenceAuthenticationHeadroom and shared by the analysis-view reader and
the bundle importer, which had no guard. Two transient peaks the budget did
not name are removed at their producers: the canonical digest hashes a large
leaf directly instead of concatenating it into its buffer, and the JSON
validator walks containers by cursor so a wide array no longer queues one
entry per member.
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb
* fix(mcp): route analyze_function summary replies to dossier consumers in docs and prompts
The MCP guide, the version-comparison and crash-triage prompt contracts,
the authored skill and the Kuna, IDA and function-matching docs still told
agents to pass analyze_function replies straight to compare_functions or
build_call_path. Under the summary default those consumers reject the reply.
They now name the retained-evidence reference for compare_functions, the
observations fields of match_native_functions, and detail: "complete" for
build_call_path, which accepts only inline dossiers.
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb
* test(evidence): pin validator member order and keep interrupted validation yielding
Independent review of the cursor validator found the interrupted-validation
fixture relied on the old last-first walk: its over-deep head was reached
before the first cooperative yield. The padding now precedes the deep
element so the walk yields first, which is the invariant the test guards.
A new case pins first-defect-in-member-order reporting, skipped
non-enumerable keys no longer count toward the yield cadence, and the
import-headroom test loads the reader through a fresh module graph so it
holds under the services project's shared workers.
Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb
* fix(ghidra): align deadline bounds and cancellation outcomes
* refactor(ghidra): shorten deadline recovery guidance
* fix(mcp): clarify the scope of inferred decompile deadlines
* test(ghidra): verify deadline workflows and document measured costs
Separate failure and registration cases by their distinct contracts.
Record actual Linux Ghidra, CLI and MCP evidence with measured context,
elapsed time, CPU and memory, and explicit remaining coverage limits.
* docs(ghidra): pin integration and distinguish baseline format failures
* fix(ghidra): own failure lifecycle wording in the provider
* test(ghidra): budget timeout fixture generation before allocation
* fix(analysis): preserve summary provenance and bound bundle guidance
* fix(ghidra): align capability and traversal deadline guidance
* style(config): align deadline guidance formatting
* docs(ghidra): record capability and traversal verification
* docs(analysis): use absolute paths for Evidence files
* docs(analysis): record completed function summary measurements
* docs(analysis): update main integration validation
---------
Co-authored-by: Syed Rishad <rishadzzzz@gmail.com>
Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
Co-authored-by: gensokyo-dev <342580529+gensokyo-dev@users.noreply.github.com>
Keep Mach-O UUID interpretation at reconciliation, environment values at the details owner, and inventory scope admission at the public operation. Remove the obsolete UUID scalar, duplicate DSH dispatch, two intermediate inventory exports, and unused body-cutoff predicate.
Keep test resource scopes explicit and cover oversized bodies through the real comparison workflow. Correct stale DSH invalid-result assertions and model DMG cancellation with the command owner, retaining an opaque AbortError control and mount cleanup checks.
Bind multi-owner shutdown errors to their live typed cleanup dependencies so retained aggregates narrow and clear as each resource is released. Keep unknown or already-resolved rejections conservatively incomplete.
Cover both release orders, retained MCP Evidence, late cancellation and retry through the SDK session shutdown boundary.
Carry descriptor outcomes, cancellation, retention and physical origin as named facts so wrappers cannot drop ownership context. Replace raw primary failure unwrapping with provenance facts across artifact consumers, and use Result for Kuna span reads including undefined rejections.
Exercise actual descriptors, rollback, cancellation and cleanup retry; update brittle snapshot and completion fixtures to use their producing boundaries.
* feat(ghidra): bound one procedure's decompile without closing the session
Fixes#5340
* fix(ghidra): report decompile limit as a request timeout
Keeps BinarySession from marking every Ghidra operation unavailable after one procedure's decompile reaches the limit, and names the MCP tool-call deadline in the remediation.
* fix(ghidra): budget the decompile limit and report cancellation-closed sessions
Adds REA_GHIDRA_DECOMPILE_TIMEOUT_SECONDS to the derived Codex/Kimi tool deadline and forwards it through setup. Marks a remote failure that settles after caller cancellation so the timeout projection no longer promises session reuse.
* fix(ghidra): align deadline bounds and cancellation outcomes
* refactor(ghidra): shorten deadline recovery guidance
* fix(mcp): clarify the scope of inferred decompile deadlines
* test(ghidra): verify deadline workflows and document measured costs
Separate failure and registration cases by their distinct contracts.
Record actual Linux Ghidra, CLI and MCP evidence with measured context,
elapsed time, CPU and memory, and explicit remaining coverage limits.
* docs(ghidra): pin integration and distinguish baseline format failures
* fix(ghidra): own failure lifecycle wording in the provider
* test(ghidra): budget timeout fixture generation before allocation
* fix(ghidra): align capability and traversal deadline guidance
* style(config): align deadline guidance formatting
* docs(ghidra): record capability and traversal verification
---------
Co-authored-by: gensokyo-dev <342580529+gensokyo-dev@users.noreply.github.com>
Select registration without skill installation in the synthetic-client recovery matrix. Preserve all four specific remediation assertions and verify the plan, failure reason, and absence of unrelated installation work.
Route MCP snapshot reads through the session's existing file-resource owner so cleanup remains visible, blocks replacement, and can be retried by close_binary. Keep reads inside the serialized open callback and remove superseded adapter resource plumbing.
Validate typed errors, exact descriptor recovery, unchanged source bytes, replay provenance, and same-connection lifecycle ordering. Focused snapshot, target cleanup, and MCP lifecycle checks passed with simulated providers; no live provider was exercised.
Fixes#6216
Share parser-owned package and runtime facts across dependency consumers.
Preserve uncertain loader requests and explicit wrapper bindings without
inventing unbound require authority in known modules. Cover selected source
grammar through the public MCP boundary and retain ambient/type dependencies.
Open each selected directory before loading its scoped policy, retaining
partial directory failures and cleanup ownership. Preserve explicit caller
negation precedence and source diagnostics across inventory projections.
Clarify how version comparison retains container provenance without claiming
semantic drift. Use independent unknown source inputs to keep candidate-limit
fixtures meaningful as conditional branch evaluation becomes more precise.
Fixes#6891Fixes#6882Fixes#6883Fixes#6859
Omit absent inventory facts without erasing explicit unknowns. Compare canonical file occurrences by source path and digest while preserving complete container provenance in observations and Evidence.
Consolidate candidate-capacity fixtures around unresolved alternatives and update inventory coverage and source-occurrence oracles. Preserve resource, identity, relationship uncertainty, cancellation, and transfer regressions.
Require a real clock-field context for numeric time normalization and actual rendered write rules for generated strings. Preserve literal read, replay and missing-response values, and retain generated aliases and distinctness within each response.
Keep clock context separate from entity identity while traversing arrays. Add domain and public CLI controls for measurements, business strings, confirmed writes, missing responses and generated-value relationships, with documented inference limits.
Fixes#6878Fixes#6837
