Commit Graph
73 Commits
Author SHA1 Message Date
morluto 4bd578cc08 refactor(views): give complete-within-view coverage only the returned count (#11132)
* refactor(views): give complete-within-view coverage only the returned count

* test(views): keep only the item-view coverage assertion whose fixture distinguishes it
2026-11-15 21:30:45 +08:00
morluto 7181e7f515 perf(mcp): advertise large output union alternatives as shared definitions (#11005)
* perf(mcp): advertise large output union alternatives as shared definitions

inspect_analysis_view's advertised output schema held every view result inline in one union definition, which the MCP SDK's default validator compiled into one function: about 1.7 s CPU and 500 MiB peak. Large union alternatives now become definitions of their own and identical definitions are merged, at the owning output projection. Tests that check results against the advertised output contract now compile that schema instead of a separate inline projection, which overflowed the main-thread stack under forked workers.

* perf(tests): run source test projects in forked workers (#11016)

Thread workers of the source lane share one process, which grew to 3.8-5.0 GiB; forked workers keep each heap separate so the largest process stays near 1.2-1.8 GiB.

* test(mcp): select the analysis view contract from its family
2026-11-15 06:13:21 -05:00
morluto 2826592759 refactor(application): build application cancellations with a required reason (#10574)
* refactor(application): build application cancellations with a required reason

Migrate every AnalysisCancelledError construction under src/application
to cancelledBy and lower the guard baseline from 671 to 442.

Shutdown refusals in BinarySession report OwnerCancellation.ownerClosed
when the caller did not abort, instead of an undefined reason.
ReverseEngineeringService and DesktopBuildOwnedWork close their work
with the typed owner reason. SharedStartupAttempt returns the departing
caller's reason with a cancelled wait. One shared isAborted predicate
replaces eleven local copies and narrows a checked signal for
cancelledBy.

* refactor(desktop): drop an unused cancellation import from desktop capture state
2026-11-15 18:38:24 +08:00
morluto 3afd8a16ee feat(evidence)!: give Evidence bundles a format revision owned by one module (#10861)
* feat(evidence)!: give Evidence bundles a format revision owned by one module

`src/domain/evidenceFormat.ts` owns Evidence format evolution. Bundles now
carry `evidence_format: 1`; every bundle reader admits only the current
revision and refuses an unmarked or other-revision bundle once, with the
single recreate-observations guidance, instead of admitting earlier shapes
one optional field at a time.

The 6.7-era artifact inventory summary identities are no longer rebuilt:
compare_artifacts checks the current projection only and reports a mismatch
with the owner's guidance. The pre-6.6 identity diagnosis uses the same
guidance. SQLite `worker_timeout_ms` and Dart AOT `string_pool.policy`,
optional only for historical Evidence, are now required.

BREAKING CHANGE: Evidence bundles written by REA 6.x (no `evidence_format`)
are refused by import, comparison, reconstruction and analysis-snapshot
readers as an integrity mismatch telling the caller to recreate the
observations; re-exporting an earlier bundle does not update its format or
identities. Bundles constructed by hand must include `"evidence_format": 1`.
6.7-era artifact summaries are refused by compare_artifacts, and SQLite and
Dart AOT Evidence without the newly required fields fails validation.

* fix(evidence): let the ledger application admit its bundle's format

build_reconstruction_obligation_ledger registered the full bundle schema with the SDK, so an unmarked or other-revision bundle was refused as invalid_request before the format owner ran. Register it like coverage: the application parses the request envelope and admits the bundle.

* feat(pcap)!: read capture Evidence through the current result schema only (#10879)

Delete the pcap read-compatibility schema that defaulted executable identity for historical capture Evidence, and require query_labels_hex (null when unknown) now that every producer writes it. Evidence from an earlier format is refused at the bundle format owner; a record that omits these fields is reported as malformed instead of defaulted.

BREAKING CHANGE: inspect_pcap_capture results always carry query_labels_hex, and analysis views no longer default missing tshark/capinfos identity fields.

* feat(desktop)!: require the effective view policy in desktop state Evidence (#10886)

inspect_desktop_application_state always records the complete policy it used, including sqlite_view_bytes. Drop the optional historical shape and the task draft's absent-policy branch.

BREAKING CHANGE: desktop application state results without effective_view_policy, or with a policy missing sqlite_view_bytes, are refused as malformed.

* feat(android)!: require component declaration facets and reference aggregates in Android Evidence (#10904)

* feat(android)!: require component declaration facets and reference aggregates in Android Evidence

The JADX producers always write the manifest component projection with every declaration facet, target_definition and direct_invokes_coverage. Require them, delete the duplicate observed component schema, drop the unknown declaration coverage that only described historical omission, and give manifest view results their explicit facet.

BREAKING CHANGE: Android package, component and reference results missing these fields are refused as malformed; component declaration_coverage and its summary counts no longer include unknown; manifest view results always carry facet manifest.

* refactor(android): parse package results with the domain schema directly

* feat(browser)!: require the DOM length unit and redirect-scoped prior-hop facts (#10897)

* feat(browser)!: require the DOM length unit and redirect-scoped prior-hop facts

Both CDP producers always declare node_value_length_unit, and the observation session writes redirect_response on every redirect event and no other. Require the unit, drop the diff's absent-unit branch, and admit redirect_response exactly on redirect rows.

BREAKING CHANGE: DOM snapshots without node_value_length_unit and redirect timeline rows without redirect_response are refused as malformed, including inline inspections passed to compare_web_captures.

* docs(browser): drop the historical redirect_response omission note

* feat(native)!: require native Evidence fields that were optional only for historical Evidence (#10946)

Mach-O encryption, slice malformed cause, symbol runtime names and import
facts; ELF export encoding facts and visibility; value-flow limits; load-image
permissions and relocation symbols; Swift type-reference kind and GPU AMD
target metadata are required. Legacy enum values (unrecorded, unknown
visibility, undecodable, modinfo_field_exceeds_limit) and the retained
schemas, view defaults and reinterpretations that served historical Evidence
are deleted.

BREAKING CHANGE: native records missing these fields are refused as
malformed; recreate the observation.
2026-11-15 17:25:31 +08:00
morluto b138f52e12 refactor: prune internal seams and preserve configuration ownership (#10430)
* refactor: prune internal seams and preserve configuration ownership

* fix(setup): keep YAML aliases and inherited registration settings on refresh

- Reuse an unchanged YAML collection only while every alias in it still
  resolves after the edit; otherwise rebuild it so the alias becomes its
  value. A sibling anchor replaced or moved in the same refresh no longer
  leaves an unresolved alias in Hermes or Goose output.
- Keep a connection selector whose existing value already chooses stdio
  (for example an inherited Hermes transport: stdio) instead of superseding
  it; remote selectors are still replaced. Explicit stdio selectors are
  therefore no longer rewritten (Kimi expectation updated).
- When the whole Hermes registration is inherited through a merge,
  override it with that merge and write only the changed fields.

* fix(setup): edit registration fields whose YAML key is an alias

A key written as an alias to a string scalar (for example *field with
field: &field env) was treated as a source-only key, so any change to
its value was refused in Hermes and Goose. Resolve such keys to their
string, keep the aliased spelling while its anchor survives the edit,
and write the plain key when the same edit rebuilds the anchor.

* test(process): bound cleanup-boundary waits and always release gates

Both cancellation tests awaited a bare started promise and released
their gates only on success, so a missed boundary waited for the outer
deadline and could leave cleanup parked. Use awaitAcknowledgement and
release and join the cleanup in finally.

* fix(setup): repair only aliases an edit leaves unresolved

Replace the pre-edit alias survival guess, which expanded aliases to
sibling anchors that survive unchanged, with an exact repair: record
what each alias in the replaced value resolves to, write the edit, then
replace only aliases left without a preceding anchor by that value.

- Keep an aliased key's source position, so its anchor stays ahead of
  later aliases.
- Treat an aliased key as its string only when no other key in the map
  resolves to the same string; an ambiguous one stays guarded.
- Override an inherited Hermes registration only when the requested
  entry keeps every inherited field, so an explicit replacement can drop
  remote selectors.

* fix(setup): repair aliases whose binding an edit changes, keeping comments

An alias whose own anchor was removed could resolve to an earlier anchor
with the same name and silently change value. Record the node each alias
resolved to and repair any alias that no longer resolves to that node.
Carry the alias's comments and spacing onto the repaired value.

* test(setup): split the Hermes anchor and merge refresh cases

* fix(setup): refuse removing an overridden key its merge would restore

The merge-retention check skipped keys the mapping also overrides, so
dropping such a key (for example a remote url during an explicit stdio
replacement) let the retained merge restore it. Check removal before
skipping overridden keys, so the edit is refused with the existing
message instead of producing a registration that cannot be applied.
2026-11-14 04:08:37 -05:00
morluto c836f57b7d refactor: consolidate shared analysis boundaries (#10293) 2026-11-12 22:05:32 -05:00
morluto 02ebd3e02d refactor: prune test-only seams and obsolete helpers (#10275) 2026-11-12 19:24:54 -05:00
morluto 5b5990f7a9 fix(views): preserve application provenance and field omission (#10061)
fix(views): preserve canonical JavaScript provenance
2026-11-11 18:17:39 +08:00
morluto 914363fbfb fix(browser-scenario): summarize all captured numeric statuses (#9936)
* fix(browser-scenario): summarize all captured numeric statuses

* test(browser-scenario): position status regression before view groups
2026-11-11 04:10:58 -05:00
morlutoandCursor Agent 133a849b2e fix(browser-scenario)!: preserve scenario evidence and coverage (#9896)
* fix(browser-scenario): page captured text on Unicode boundaries

* fix(browser-scenario): retain popup events when open metadata exceeds its budget

* fix(browser-scenario): redact saved secrets across wire encodings

* fix(browser-scenario)!: record parsed request actions in evidence

BREAKING CHANGE: New captures with request actions that save nothing include save: [] in the recorded parameters. Their scenario and Evidence digests can differ from older captures of the same scenario. Read retained captures with their original recorded digests and use the newly recorded digest for new captures.

---------

Co-authored-by: Cursor Agent <cursoragent@cursor.com>
2026-11-10 23:48:13 -05:00
morluto cb4e5cfbff feat(analysis): make resource budgets recoverable across CLI and MCP (#9706)
* refactor(analysis): centralize resource budgets and recovery facts

* feat(analysis): expose ASAR and Ghidra runtime admission controls

* feat(artifacts): expose reader admission and preserve limited recognition

* feat(javascript): expose recoverable semantic precision budgets

* feat(web): add recoverable source-map budgets and compact retained views

* feat(web): make historical capture decoding budgets recoverable

* fix(desktop): enforce selected view policies across capture and export

* feat(runtime): make Frida and LLDB retention budgets selectable

* feat(native): expose diagnostic budgets and preserve exhaustion causes

* feat(managed): expose recoverable snapshot and representation budgets

* feat(metadata): make Go and Rust inspection budgets recoverable

* feat(wasm): expose representation and producer admissions

* feat(evm): expose per-call worker resource budgets

* feat(android): make resource and string-pool omissions recoverable

* feat(producers): expose command and recorded-capture budgets

* docs(analysis): record recovery contracts and integrated validation

* fix(docs): link calibration oracle from published verification pages

* fix(docs): restore desktop task anchors and receipt links

* test(analysis): align fixtures with selectable budget contracts

* fix(analysis): remove source-location projector dependency cycle

* test(analysis): refresh budget recovery and verifier regressions

* test(analysis): preserve format and publication recovery expectations

* test(windows): align conformance with owned runtime admission

* fix(desktop): preserve selected alias kinds in exported state

* test(analysis): align provider fixtures with recoverable budgets

* test(desktop): validate emitted alias metadata structurally

* fix(ghidra): classify bounded Windows endpoint refusals

* test(cli): assert selectable artifact admission recovery

* fix(cli): preserve capture provenance in environment builds
2026-11-10 05:11:20 -05:00
6c1faaed75 fix(analysis): order graph depths numerically (#8268)
Co-authored-by: juncheng.ye <yechen_0@foxmail.com>
Co-authored-by: morluto <76467478+morluto@users.noreply.github.com>
2026-11-09 20:28:46 +08:00
morlutoandFelix 52fe342c73 fix(evidence): preserve subjects in derived workflows (#9492)
* fix(javascript): preserve verified trace evidence subjects

Co-authored-by: Felix <3937061056@qq.com>

* fix(evidence): preserve selected subject names in views

* fix(evidence): preserve subjects across related workflows

* fix(evidence): retain inventory projection subjects

* fix(managed): validate projected graph root identity

* style: format evidence and native command code

* fix(javascript): validate static graph root identity

* test(javascript): update feature trace graph expectations

---------

Co-authored-by: Felix <3937061056@qq.com>
2026-11-09 08:12:17 +08:00
morlutoandCursor Agent 88cf498036 fix!: preserve results when source publication fails (#8444)
* fix: retain address context cleanup failures

* fix!: preserve address context input errors

BREAKING CHANGE: Strict clients that cached the previous full inspect_address_context output schema must refresh tools/list and accept the typed error field on unavailable facets.

* test: use session contract for address context

* fix!: preserve address context resource recovery

BREAKING CHANGE: Clients validating unavailable context facets against a cached strict full output schema must refresh tools/list to accept resource_constraint errors.

* fix: expose authenticated records refused by the evidence ledger (#8426)

* fix: preserve completed evidence on retention refusal

* fix: preserve context when unretained evidence exceeds delivery limits

* fix(mcp): recover oversized context from session evidence

* fix(evidence): preserve completed atomic write results

* fix: retain completed results when source publication fails

* test: cover bounded recovery with unknown retention

* fix(evidence): preserve recovery identity and finalization facts

* fix(evidence): clarify retention of omitted observations

* test(evidence): compare omission guidance with its owner

* fix(evidence): preserve completed composed workflows

* fix(evidence): clarify unretained recovery export

* test(evidence): cover mixed recovery guidance

* fix(evidence): preserve caller scope in secondary failures

* refactor(evidence): remove superseded cleanup projection

* test(evidence): align recovery checks with owners

* fix: preserve cleanup on partial recovery limits

* test: use owners for diagnostic wording

* fix: admit completed analysis before evidence construction

* fix: preserve selected paths when reusing evidence

* fix(cli): preserve caller path in unretained evidence

* fix(evidence): preserve recovery metadata and admission bounds

* refactor: consolidate evidence closure imports

* style(test): format CLI help default annotations (#9280)

* test(mcp): keep recovery checks focused on contract facts

* fix(evidence): preserve feature trace replay revision

* test: align evidence recovery checks with ownership

* test: align partial recovery and cleanup diagnostics

* fix(evidence): preserve nested partials during cleanup

* fix(evidence): respect outer recovery ownership

* fix(capture): discard rejected nested observations

* test(frida): assert inline evidence recovery

---------

Co-authored-by: Cursor Agent <cursoragent@cursor.com>
2026-11-09 02:41:54 +08:00
morluto 5044e20171 test: focus diagnostics and evidence checks on behavior (#9303)
* test: focus configuration diagnostics on their owners

Preserve shape errors, selected paths, recovery guidance, and unchanged-file behavior across parser, setup, and uninstall boundaries.

* test: focus artifact and evidence checks on behavior

Retain format, identity, malformed-input, and cleanup coverage while removing fixed prose and closing the admitted test source.

* refactor(debugger): use configured session admission limits

* test: focus evidence and diagnostics on behavior

* fix(test): restore verifier export and formatting

* test(config): verify debugger limit ranges

* test(rizin): keep fixture executable authoritative

* test(rizin): isolate debugger fixture environment
2026-11-08 16:39:20 +00:00
morlutoandCursor Agent b40b0b8665 feat: page recorded Evidence arrays (#8863)
* feat(kuna): verify release 1.990

* feat(kuna): preserve stored pointer references

* fix(kuna): group image-wide reference coverage gaps

* fix(evidence): retain producer-required xref observations

* fix(mcp): clarify xref address page scope

* fix(kuna): preserve reference target aliases

* feat: page recorded evidence arrays

* fix(mcp): guide large evidence views to files

* fix: preserve source context in recorded views

* fix: keep recorded rows accessible with large context

* fix: disclose alias scope in recorded references

* test(kuna): identify pointer fixture version

* fix(view): keep deep recorded-array pages inside Evidence depth

Parent parameters are valid on the Evidence root and one level too deep
under a page result. Omit those parameters, and refuse a row that still
cannot be nested, instead of throwing from Evidence parsing.

* test(view): narrow recorded-array depth pages before reading parameters

* fix(view): validate recorded page rows once

---------

Co-authored-by: Cursor Agent <cursoragent@cursor.com>
2026-11-08 08:56:24 +08:00
morluto 1596d6a275 test: reduce wording coupling and prune redundant coverage 2026-11-08 00:01:18 +08:00
吴佳浩Alben 1c0a02d4a4 fix(evidence): bound malformed file field diagnostics (#8557)
* fix(evidence): bound malformed file field diagnostics

`readEvidenceFileSource` projected every validator issue, and the generic error
delivery applied the MCP response budget afterwards. A file with many invalid
fields therefore produced a transport `resource_constraint` that replaced the
typed file error, so the caller lost the selected path entirely. Issue #8453
reports exactly that: 20,000 invalid values still returned a direct
`invalid_request` with the path and every field issue, while 125,000 returned
`resource_constraint` with neither.

`projectInputIssuesWithinBudget` already existed for this but had no production
caller. The reader now projects within a 64 KiB allowance and, when the whole list
does not fit, keeps the largest leading group that does and appends one explicit
omission issue naming how many of how many were dropped. The typed file error and
its `path` therefore survive the response boundary, and the diagnostics stay
actionable and explicitly incomplete instead of hiding the real failure.

Two regressions cover the bound and the fits-in-budget case. With the unbounded
projection restored, the bound test and its supporting fixtures fail.

* chore: retrigger title and readiness checks after the title was corrected

* fix(evidence): bound file diagnostics in one pass and cover the MCP boundary

Review findings on the first version.

**The prefix was not maximal.** `boundedContentIssues` halved the list and returned
the first attempt that fit, so a file just over the allowance lost roughly half its
diagnostics. Prefix selection now lives in the shared projector
(`projectInputIssuesBounded`), which walks the issues once and stops exactly at the
allowance, keeping the largest fitting prefix.

**A compound issue could still lose its location.** One `unrecognized_keys` issue
naming hundreds of keys expands into hundreds of field diagnostics and can exceed
the allowance on its own. The projector now retains a diagnostic at that issue's
path instead of returning only the omission notice.

**The regression never crossed the MCP boundary.** The issue is about the delivered
MCP error, so `evidenceFileSourceMcp.test.ts` sends the 125,000-value fixture
through the production `inspect_analysis_view` tool and asserts the delivered error
stays `invalid_request`, keeps `details.path`, keeps bounded `content_issues`, and
fits the response budget. Both regressions fail without the bound.

* test(evidence): move the MCP delivery regression to the adapters project

Review finding. `scripts/lib/test-projects.mjs` assigns `src/application/**` to the
`services` project, so the delivery regression sat in the wrong project even though
it exercises the production MCP tool registration. Moving it to `src/server/` puts
it in `adapters`, which runs the other MCP boundary tests and plans the same way.
2026-11-06 14:53:25 +08:00
+27 fb453f2930 fix(mcp): support retained pseudocode summaries and paging (#5046)
* refactor(mcp): share official tool evidence registration

Route official tools through registerEvidenceTools and remove the duplicate
execution, progress, and Evidence delivery pipeline.

Preserve relationship coverage in the shared path and reuse the existing
source Evidence recording helper.

Validation: typecheck and 29 focused MCP tests passed.
Real native providers were not exercised.

* fix(mcp): support retained pseudocode summaries and paging

Allow procedure_pseudo_code to return an opt-in summary linked to its
retained complete Evidence. Extend inspect_analysis_view to page the
original pseudocode without repeating provider analysis.

Preserve default complete output and exclude delivery detail from
provider parameters and source Evidence identity.

Add regression coverage for large results, Unicode, null and empty
output, missing retention, transport-overflow recovery, and CLI paging.

Validation: 178 focused tests, build, check, docs:check, and test discovery
passed. Real stdio simulation reconstructed 98,000 code units exactly.
Real Ghidra, iTunes, and Claude Code verification remains unavailable.

Fixes #5032

* test(mcp): scope pseudocode contract lookup to official tools

* feat(desktop): capture and export apps installed from a downloaded .deb (#8954)

* feat(desktop): capture a Linux desktop application in use

Add `capture-desktop-application`, a CLI-only, Linux and X11 capture that
launches an installed desktop application, watches it while it is used and
writes capture Evidence plus SHA-256 addressed content:

- inventory: desktop entry, launch command, executable, package and its
  apt sources (or snap, flatpak, AppImage), Electron markers and candidate
  state directories;
- session: the launched process tree, client windows from xprop with the
  first application window time and a window match, and files held open;
- state: a stat walk of the home directory before launch, at checkpoints
  read from stdin, at stop and after exit, with created, modified, deleted
  and retyped paths and the content of changed files and state directories.

It refuses non-Linux hosts, missing DISPLAY or xprop, a non-empty output
folder and an application whose window is already open, and signals only
processes it started.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): own launched processes, confirm walk coverage and keep cancelled captures

- Launch through the owned provider path with a run token; release with
  SIGTERM, then the token-verified group cleanup, after every session.
  Processes without the token are never signalled; each records whether it
  carries it, and the session records whether cleanup was verified.
- Report creations and deletions only where a walk listed the nearest
  existing directory; count the rest as unconfirmed.
- Retain a file only when it is still the walked version, through owned
  no-follow reads; charge the budget only for new content; create files
  exclusively in a private output folder owned by the caller.
- Walk content roots outside the home directory, compare paths in their
  physical spelling, and run executables from the caller's directory.
- Refuse when the window list cannot be read, re-evaluate window ownership
  each sample, handle one queued request per sample with a bounded stdin
  queue, and write the capture with end reason `cancelled` on interruption.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep owned cleanup failures and fresh digests

- Allow a capture cancelled before any requested checkpoint to hold only the
  baseline.
- Retry an incomplete stop once; if cleanup is still unverified, write the
  capture and fail with the run token and process group as cleanup
  resources.
- Classify path changes after a walk (ENOTDIR and other selected-file
  errors) as changed_since_walk instead of failing the capture.
- Treat a non-directory ancestor as proof that nothing existed beneath it.
- Report a before digest only for the file version it was read from.
- Derive stderr_truncated from stderr's own byte counts.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* wip(desktop): state view over a capture folder

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep failed file-handle closes owned for retry

Content reads pass retainFailedClose, so a handle whose close fails stays
owned by the content store; the capture retries those closes after it is
written and fails with the output folder as the cleanup resource if one
still cannot be closed.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* feat(desktop): read a captured application's state

Add inspect-desktop-application-state, a CLI command that reads a capture
folder into the application's state: every retained or changed file with
its role and reasons, a typed JSON view of each version (SQLite through the
shared worker, dconf through a private dconf dump, JSON, XML, key files,
text) and the kinds of change between versions (lines, values, keys, rows).

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): report process and handle cleanup failures together

When both the launched processes and a retained file's handle remain
unresolved after the capture is written, one cleanup error now lists both
reasons and both resource sets.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* feat(desktop): export a captured application as an agentenv computer app

Add export-desktop-application, which writes an agentenv bundle with one
computer_app environment from a capture folder and its state view: the
apt package, a boot launch matched on the captured window class with a
window ready check, owned paths from the state roles, a seed of the
baseline files, data hooks that call agentenv's add/get/reset helpers
with a typed JSON view on get, a skill, a README and a deploy smoke task.
The desktop CLI commands now load their services lazily.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep state views faithful to the capture

- Read key files, XML attributes, dconf groups and SQLite tables into
  dictionaries without inherited properties, so captured keys such as
  __proto__ stay data.
- Version databases with their write-ahead log as of each checkpoint, and
  stage only digest-verified bytes for the SQLite and dconf readers.
- Detect the format per version, report format changes, keep JSON null and
  empty containers as values, keep XML text and preserved whitespace, and
  mark truncated views (including XML depth) and comparisons of them.
- Number versions and changes by checkpoint index, decide baseline
  presence from the captured type, and keep tagged SQLite integers, text
  bytes and blobs distinct.
- Carry the capture's limitations and omitted content forward, match state
  directories by their home path, index changes once per capture, keep
  failed handle closes owned, and finish the CLI through the shared owner.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep coverage, logs and handles honest in the state view

- Read coverage flags only from formats whose readers write them, so JSON
  fields named truncated stay data.
- Fail a SQLite version whose write-ahead log existed but was not retained
  or does not match its digest, instead of reading the database alone.
- Close retained content on every exit, including cancellation, and report
  a close that still fails together with the primary failure.
- Finish the CLI with the canonical operation name.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): export only what the computer can install and seed

- Refuse packages not from the Ubuntu 24.04 archive, since the computer
  installs by name from that archive.
- Start the launch command in the captured working directory.
- Respell the home path only in files the state view read as text.
- Report files that were not retained instead of dropping them silently.
- Load captured dconf keys for apps that own no files.
- Keep home-level files as owned paths; rename reserved Python class names.
- Mark truncated SQLite and text views in the class's get view, and read
  file types the way the state view does.
- Release the output tree through a resource scope, and read seeds through
  an owner closed on every exit.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep staged folders owned, symlinked state roots and XML values

- Stage database bytes in a private runtime root released through a
  resource scope, so a failed removal keeps its owner and is reported with
  the read's outcome.
- Report cleanup facts and owners from desktop failures instead of
  wrapping them as a plain adapter error.
- Record the state directories as walked, in their physical spelling, and
  match roles against both spellings, so files in a symlinked state
  directory are not mistaken for selected documents.
- Keep whitespace-only XML leaf values; drop only formatting between
  elements.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): read XML in the exported app the way the state view does

Keep whitespace-only leaf values and xml:space="preserve" text in the
generated get view; drop only formatting between elements.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): release retained handles with their owners, read older captures

- Release retained-content handles whose close failed through a resource
  scope on every exit; a release that fails again reports the exact handle
  owners. A read that finished keeps its bytes when only its close failed.
- Accept captures written before state directories were recorded, and say
  in the state view's limitations that symlinked state directories may be
  misclassed for them.
- Compute each XML element's whitespace context once instead of scanning
  siblings for every text run.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): boot without the working folder, bound XML, accept mirrors

- Try the captured working directory only when an argument is relative,
  and start the app even when that folder is missing.
- Cut the generated XML view at REA's node and depth limits, and keep one
  unreadable file from failing data/get.
- Accept Ubuntu 24.04 mirrors, not only the canonical hosts; PPAs and
  other repositories are still refused.
- Read seeds through the retained-content owner's new signature.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): state view review round

- Stage a retained -journal beside its database so the SQLite worker
  accepts an inactive journal and refuses a hot one; a -wal or -journal
  that existed but was not retained (including one omitted at the
  baseline) makes the version unreadable.
- Keep tables that read when another fails, and let cancellation and
  unfinished cleanup propagate instead of becoming view errors.
- Read text as a key file only when every line parses as one.
- Rank a file named in a window title or selected by the caller as a
  document even when the application holds it open; match titles on
  file-name boundaries; leave the display name out of dconf matching.
- Bound JSON and key file views (4 MiB, 500 levels, exact numbers) and
  report too-large, missing and altered retained content separately.
- Add no version or change while a database stays absent.
- Read staged databases in place instead of copying them again.
- Give Evidence the same limitations as the result.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): export review round

- Load captured dconf keys without D-Bus: install dconf-cli, compile the
  existing and captured key files into the user database, and warn on
  failure instead of stopping the server.
- Start relative-argument launches in the captured working directory,
  the home included, since the framework launches from the app folder;
  respell the home itself and option values under it.
- Read views in a thread, skip files over 64 MiB, align the generated
  readers with the state view's, and close SQLite connections.
- Never own the home or a shared base folder; map a symlinked state
  directory's files back to their home spelling.
- Report omitted files and unretained opened folders.
- Name the module so it cannot shadow another, and keep the class off
  the module's own names; derive names the bundle check accepts.
- Write seeds as they are read, and remove an unpublished bundle on
  failure.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): capture review round

- Ask the launch process group and token carriers to exit before
  killing them, on errors too; report incomplete cleanup with its facts.
- Count descendants of the launch as started by the capture even when
  their environment cannot be read; treat a reused pid as a new process.
- Follow symlinked desktop entries; name a flatpak's state after its
  application id; match flatpak windows by name only.
- Stop on end of input; refuse empty, duplicate and reserved checkpoint
  names; require whitespace after the checkpoint keyword.
- Stay on each walk root's device, and never walk or retain `/` or a
  directory containing the home; say so in the limitations.
- Refuse a window manager that does not publish _NET_CLIENT_LIST.
- Remove retained content when a capture fails before it is written.
- Skip reading a file larger than the remaining content budget.
- Record apt's archive origin for each package source.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): read an unset client list as no windows when supported

xfwm4 leaves _NET_CLIENT_LIST unset while it manages no windows, so the
capture refused an ordinary desktop with nothing open. Read
_NET_SUPPORTED with the list: an unset list means no windows when the
window manager supports it, and the capture is refused only when it
does not. `xprop`'s "no such atom" output now reads as unset too.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): accept packages by apt's archive origin

Accept a package source when apt reports its origin as Ubuntu for a
noble suite, so mirrors count and PPAs or other repositories that merely
have "ubuntu" in their URL do not. Captures made before origins were
recorded fall back to Canonical's own archive hosts. Seed reads report
why retained content could not be used.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* feat(desktop): capture and export apps from vendor apt repositories

A closed-source app installed from its vendor's apt repository, such as
Typora, can now be captured and exported as a computer app.

- The capture records each non-Ubuntu repository listing the installed
  version (uri, suite, components from apt's sources files, one-line or
  deb822) and the key that signs it: the signed-by key, or the trusted
  key that gpgv shows verifies the repository's signed index. The key
  is retained with the capture.
- The capture records the packages owning the libraries the executable
  loads (DT_NEEDED with RUNPATH and the linker cache, through REA's ELF
  readers), since a vendor package may not depend on them.
- The export declares a verified vendor repository as an AptSource with
  its key, installs a vendor package's library packages, and adds
  --no-sandbox to an Electron app's launch, since a container denies
  Chromium's sandbox.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): report a locked database at once in data/get

A database the running app holds locked made each data/get wait sqlite's
five-second busy timeout before reporting it. Record the Typora run in an
agentenv computer in the verification.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* perf(desktop): detect key files without splitting the whole text

Read lines one at a time and stop at the first that a key file view
would drop, instead of splitting a file of up to 64 MiB into arrays
before its format is known.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep symlinked homes and state folders under the home in exports

- Respell a path under its state folder's logical spelling only when that
  spelling is under the captured home, so a symlinked HOME keeps its
  files; pair walked and logical state folders only when the capture
  lists the same number, and match the innermost folder first.
- When two files map to one home path, keep the one present before the
  capture and name the other in the limitations.
- Read key files in the generated data/get with the state view's rule,
  checked against it by running the helper under python3.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): end captures on zombies and keep cleanup owners

- A zombie or dead process no longer keeps the session open.
- Remove only the partial capture file this run created.
- Keep the exact owners of handles and processes whose cleanup failed on
  the returned error, so a retry can release them; test the published
  capture's cleanup-failure branch with mixed outcomes and retries.
- Release the application once even when the exit checkpoint fails.
- A cancellation before the capture is written removes what it retained.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): vendor package review round

- Match apt sources through `apt-get indextargets`, which covers flat `./`
  and `/` suites and gives each release file and sources entry.
- Accept a key whose signature verifies even when the release carries
  another signature without a key here; keep only the verifying key from
  a keyring holding several (OpenPGP packet splitter).
- Install the package from its repository's release (`name/<release>`),
  declare one source per URI and suite, support only the capture host's
  architecture, and refuse Ubuntu Pro repositories.
- List only library packages the computer can install; walk libraries only
  for vendor installs, with RPATH inherited as ld.so does, normalized
  paths, and DT_NEEDED bounded while reading.
- Put --no-sandbox after the program an env wrapper launches; keep the
  gpgv folder's owner when its removal fails; respect --max-file-bytes for
  keys; wait 0.25 s on a busy SQLite database in data/get.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(desktop): keep the vendor spec's gpgv command on one line

A code span broken across lines left `<binary keyring>` for VitePress to
read as an unclosed HTML tag, so the docs build failed.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* feat(desktop): add a validated task to exported desktop applications

Each capture can now yield one agentenv task in its exported bundle. An
agent writes the task (a prompt plus declarative checks over the app's
data/get views); REA validates it and stays model-free.

- `describe-desktop-application-task` summarises a capture's net change
  per file (role, format, views before and after) and drafts checks.
- Checks: file presence, lines present/absent/counted, JSON-pointer values,
  SQLite rows and counts. REA keeps a task only if a check fails on the
  seed and every check passes on the captured end state; a file that was
  not retained at the baseline counts as absent, as the computer starts.
- `export-desktop-application --task` writes tasks/NAME.json (deploy,
  agent, skills, recording, prompt, verifier), a compiled verify.py that
  reads data/get, and an eval. A boundary test runs the verifier under
  python3 and checks it agrees with REA's evaluator on every check kind.
- Docs, spec and skill guidance, with the solve-rate recipe.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(desktop): keep the seed test in its own block

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(desktop): record the task verifier driven in an agentenv computer

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(desktop): record the Typora task run in an agentenv computer

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep task checks bounded, complete and attributable

- line_count counts lines holding a substring (contains) instead of
  matching a regular expression, which could stall the verifier on
  agent-written text and read differently in Python.
- value_equals of a whole object or array is undecided on a truncated
  view.
- The draft keeps a database whose rows changed under an unchanged hash,
  and a file whose truncated views match while it changed.
- A task file that cannot be read keeps the reader's detail, and a failed
  cleanup keeps the read failure as its primary.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): leave a file with one version out of the task draft

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(desktop): update the task verification's test counts

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(desktop): record the task solve rate with Claude Code and Sonnet 5.5

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* feat(desktop): capture and export apps installed from a downloaded .deb

capture-desktop-application --package-file reads the file's control fields
with dpkg-deb and records its SHA-256, size and dependencies when it holds the
installed package; the file itself is never kept. The library walk now also
runs for local installs.

export-desktop-application --package-url declares agentenv's
Download(url, sha256) for that file, its dependencies and library packages as
apt packages, and a run script that installs it with dpkg.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): seed app-named dotfiles and respell UTF-16 seeds

The capture now treats dotfiles in the home named after the application
(.varicad-cfg.ini, .notesrc) as state roots, so a file the app only reads
during the capture is still seeded. The exported seeding respells the
captured home in UTF-16 text files with a byte-order mark, keeping the mark.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): hold readiness until the app's own window shows

An exported app is ready only once a window of its class that the taskbar
lists is shown, so a splash screen of the class, which skips the taskbar, no
longer counts as the app being up.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(desktop): record VariCAD captured, exported and run in an agentenv computer

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep exported views strict JSON for infinite and inexact numbers

The exported data/get spells infinite and negative-zero SQLite reals as REA's
SQLite reader does ("Infinity", "-Infinity", "-0"), and refuses a JSON file
holding a number that reading would change (1e999, integers past 2^53, -0,
rounded fractions) with the state view's own error, instead of a view with
an infinity in it.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep package-file facts tied to one file and URLs unechoed

- A --package-url refusal never repeats the URL, and credentials are checked
  before the scheme.
- The package file's identity must hold between dpkg-deb's read and the hash.
- A failed close keeps its cleanup owner even when the capture is cancelled.
- Readiness also ignores windows typed as splash screens.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): record database logs and keep state changes distinct

- A selected path that is not a directory brings its -wal and -journal as
  content roots, so the capture records whether they exist and retains them.
- The state view treats a file as absent only under recorded content roots
  and refuses a database whose log presence is unknown.
- JSON changes list containers too, so an array that becomes an object with
  the same members is a change.
- Key file entries escape the key as a JSON pointer segment, so [a/b] c and
  [a] b/c stay apart.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep watching through unread samples and late workers

- An unreadable window list is unknown, not zero windows, and is named in
  the limitations.
- Before ending the session, live run-token carriers no parent link reached
  are tracked; an unreadable process table leaves the exit unknown.
- An env prefix's assignments find the program and name its XDG folders.
- flatpak run options that take a value are skipped with it, -- is honoured
  and a /arch/branch suffix is dropped from the id.
- State directories include the entry's full id.
- Path options refuse empty values; roots count toward the entry limit.
- A capture file whose close failed stays owned and is retried on discard.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): bound apt sources, keep older captures and cleanup owners

- Sources files parse into one stanza per line or deb822 paragraph with its
  URIs and suites kept as lists, so no URI x suite product is built.
- Repository architectures and release are optional, so captures written
  before they were recorded parse; the export treats them as unrestricted
  and unknown.
- Library sources are matched against every index of a declared
  repository's URI, suite and components.
- Two failures side by side keep both causes and both cleanup owners, and a
  host file whose close fails reports a lease on its handle.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): match escaped key file entries and suggest containers through members

- The draft's key file lookup uses the state view's escaped `group/key`, so a
  key holding `/` or `~` still gets its suggestion.
- JSON and XML changes now list containers too; the draft suggests an added
  or removed container through its listed members, and a container only
  when none of its members is listed.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): read relative PATH entries from the launch folder

A program, or an empty or relative PATH entry, is resolved from the folder the
program starts in, as the launch does, so `env PATH=. app` with the entry's
Path still finds the app.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* perf(desktop): compare JSON views on one shared path

JSON and XML changes are found by walking both trees with one shared pointer
path, building a pointer only for a listed value, so memory follows depth
rather than every container's full path. A pointer over 4096 characters is
counted but not listed. A 256-level document with 4000-character keys went
from about 251 MiB of heap to under 1 MiB.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep JSON Lines as text in the exported reader

The exported reader parses the whole text before an inexact number makes it
JSON with an error, so JSON Lines with an integer above 2^53 stay text as in
REA. Over-long integer spellings are unsafe without converting them. The
guide no longer claims large integers keep their value.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep the state-path help free of dash-led words

The CLI alias check reads `-wal` and `-journal` in help text as short flags,
so the help names the write-ahead log and rollback journal instead.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): never record or export apt source credentials

- Source URIs lose any user name and password as they are parsed, the way apt
  splits them, and so do index-target URIs and descriptions and the sources
  apt-cache policy lists, so matching works whether or not apt prints them.
- A repository whose entry held credentials is marked
  `uri_credentials_removed`, and the export refuses it, or an older capture
  whose URI still holds them, with a reason that names no URL.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): look programs up without normalizing their paths

Program paths and PATH entries are joined rather than resolved, so `..` after
a symbolic link means what it means to the launch. The lookup moves to its own
module.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): note inexact JSON numbers with a flag, not a list

The exported reader only needs to know whether any number was inexact, so it
keeps a boolean instead of every rejected spelling.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): refuse older captures that still hold apt credentials

A capture written before credentials were removed counted the credentialed
repository's libraries as installable, so the export refuses it whole and asks
for a new capture rather than declaring packages no source offers. Recorded
policy sources are redacted in export messages too.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(desktop): keep the credential fixture on an example host

A login on a real host reads as a secret to the commit scanner, so the older
capture's fixture uses apt.example.com like the other credential tests.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): tidy looked-up paths and search relative entries only for env

Empty and `.` segments are dropped from a looked-up program path, which keeps
`/snap/bin/` entries recognisable as snaps, while `..` is still left for the
kernel. Relative and empty PATH entries are searched only in the PATH an `env`
prefix sets, which travels with the exported launch; the host's own PATH does
not.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep excluded and unwalked database logs unknown

The capture records the paths every walk left out, and the state view treats
a log as absent only under content roots the baseline walked completely and
outside those exclusions, so an excluded or unvisited log leaves the database
unread rather than read without it.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): judge JSON numbers after duplicate keys settle

The exported reader marks an inexact number instead of flagging it during the
parse, then looks for marks in the parsed value, so a number a later duplicate
key overwrote no longer refuses the file, as in REA.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): redact a repository's policy source when it names it

An older capture whose policy source matched no sources entry kept that text
whole, and the export named the repository by it; the export now names it
without any user name or password.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): never signal the launch group on unknown membership

When the current read cannot observe a carrier's process group, the carrier
is signalled on its own instead of letting an older process-table row grant
a group-wide SIGTERM.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): look programs up in the launch's order and refuse host-relative finds

The lookup searches PATH as the launch does, an empty entry meaning the
launch folder, so inspection and launch name the same program. A program found
only through a relative or empty entry of the host's own PATH is refused,
since the exported computer would not have it; an env prefix's PATH travels
with the command.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): count unchecked paths and keep logs behind them unknown

Each walk counts the paths it could not stat and the directories on another
device it did not enter, and the checkpoint records it as `unchecked_paths`.
The state view treats a log as absent only when the baseline left nothing
unchecked, so a log whose stat failed stays unknown.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* perf(desktop): scan parsed JSON with one iterator per level

The check for marked numbers walks the parsed value with an iterator per
nesting level instead of copying each container's children; a million-entry
array went from about 15.7 MiB to 8.1 MiB of peak traced memory.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): start a relative program from its captured folder

An exported launch whose program path is relative, such as `./app` from an
entry's Path, now changes to the captured working directory first, as it
already did for relative arguments.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>

* fix(electron): reject non-directory scenario roots before launch (#8967)

* fix(contracts): align managed example MethodDef scope (#8966)

* docs(debugger): document configurable session limits (#8963)

* docs(debugger): document configurable session limits

* docs(debugger): clarify GDB control command deadlines

* docs(debugger): qualify configurable GDB output budget

* docs(debugger): clarify one-shot CLI settings scope

* docs(debugger): preserve repository line endings

* docs(testing): explain npm launcher selection in PowerShell (#8962)

* docs(mcp): explain PowerShell launch environment scope (#8961)

* docs(mcp): explain PowerShell launch environment scope

* docs(mcp): qualify saved setup selections and OpenCode environment

* fix(native): declare temporary filesystem writes for inspect_macho (#8959)

* fix(environment): retain ID ordering with missing clocks (#8957)

* fix(environment): retain ID ordering with missing clocks

* fix(environment): compare known creation clocks across gaps

---------

Co-authored-by: hhang <169027046+xu91102@users.noreply.github.com>

* fix(gpu): distinguish ELF string scan limits from corruption (#8955)

Co-authored-by: hhang <169027046+xu91102@users.noreply.github.com>

* fix(setup): replace the fixed Hopper download deadline with a stall timeout (#7150)

* fix(setup): replace the fixed Hopper download deadline with a stall timeout

Hopper package downloads aborted after a fixed 120 s, which was also the
largest deadline the download owner accepted. The current 32 MB Linux
package needs about 132 s at the reporter's sustained 245 KB/s, so setup
could never finish on that connection, and the timeout surfaced only as
Node's generic abort message.

Abort a download when no response bytes arrive for 30 s, or when it
outlives a 15-minute overall bound, with a tagged
HopperDownloadTimeoutError that names the URL, the limit reached and the
bytes received. Linux and macOS setup already relay a thrown download
error's message; the Linux publisher now keeps it for release metadata
and public key fetches instead of a generic verification failure.
Metadata and key fetches keep their 10 s bound.

Refs #7077

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(setup): keep the macOS release feed on the metadata limit

The stall-timeout change left the macOS release feed fetch on the
package download bounds. That fetch could then wait up to 15 minutes
instead of the 120 s it had, while the installation guide says release
metadata keeps a 10 s limit. Only the Linux publisher owned that limit.

Move the 10 s metadata limit into HopperDownload.ts beside the package
bounds. The Linux feed and key fetches use it, and the macOS installer
now passes it for its feed fetch through the installer host.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>

* fix(cli): parse environment-serve --port and --host like rea mcp --http (#7092)

* fix(cli): parse environment-serve --port and --host like rea mcp --http

environment-serve declared --port as a number, so incur coerced the flag text with Number(): an empty --port= bound an ephemeral port instead of failing, and 0x1F90 or 1e3 were reinterpreted. --host accepted whitespace. docs/cli.md says these flags resolve like rea mcp --http, which accepts only decimal port text and a non-empty trimmed host. The flags now use the same rules and are refused before binding.

* refactor(cli): reuse the shared MCP listener port and host schemas

* fix(adb): separate unresolvable paths and host capacity in adb spawn failures (#6188)

* fix(adb): name unexecutable adb paths in readiness refusals

When REA_ADB_PATH or the PATH-resolved adb is a directory or a file the
host refuses to execute, the version probe fails at spawn with EACCES or
EPERM. That fell through to the generic "did not report a usable version"
refusal, which named neither the path nor the cause.

Classify those spawn errors as binary_not_executable (provider rejection
executable_missing), name the selected path and errno, and give
remediation for the environment, PATH and host-policy cases. The generic
fallback now names the selected path too.

Fixes #5689

* fix(process): admit synchronous spawn errors as captured failures

Node throws spawn errors other than EACCES, EAGAIN, EMFILE, ENFILE and
ENOENT synchronously from execFile. execFileBytes called execFile inside
its Promise executor, so ENOTDIR or EPERM became a rejection without
capture fields and execFileOutputFailure returned undefined. Consumers
that classify by failure code, such as the adb version probe, could not
see the code, which left the adb EPERM branch unreachable.

Catch synchronous spawn errno errors at the capture boundary and attach
the same empty capture an asynchronous spawn failure carries. Argument
validation errors stay unadmitted.

The adb version probe now reports an ENOTDIR selected path, such as a
REA_ADB_PATH whose parent is a regular file, as a missing binary with
the filesystem error code instead of the generic version refusal.

* fix(process): expose spawn failures from the capture owner

execFileBytes knows when a command never started, but
ExecFileOutputFailure did not say so, so consumers reread raw syscall
and code fields and disagreed. Mark both the synchronous throw and an
asynchronous `spawn <path>` error with `spawnFailed: true`, and set
`path` on the synchronous error to match the asynchronous shape.
Argument validation errors stay unadmitted.

Consumers now use the owner field:

- inspectAdbClient never reports a spawn errno as `exit_code`. ENOENT,
  ENOTDIR, ELOOP and ENAMETOOLONG are `binary_missing`; EACCES and EPERM
  stay `binary_not_executable`; any other spawn errno, such as EINVAL,
  is `binary_not_executable` with a path-naming "could not be started"
  message. Each records `filesystem_error` and `path_source`. EACCES
  remediation also names parent directory search permission, and EPERM
  remediation no longer names host policy as the only cause.
- DarwinProcessRunTokenReader tags every not-started compiler as
  `spawn_failed`, not only ENOENT. EACCES, EPERM and ENOTDIR were
  previously `failed`.
- NativeDmgArtifactReader uses one not-started rule for both
  `processNotStarted` (previously `spawn ` only, so synchronous errors
  were missed) and the ENOENT unavailable/io split (previously any
  `spawn` prefix). Its fake hosts now reject with real execFileOutput
  spawn failures.

* fix(process): classify spawn failures consistently across consumers

Admit synchronous and asynchronous spawn errnos through one helper that
requires an errno and a `spawn` or `spawn <path>` syscall. The
synchronous shape now also gains `spawnargs`, so both shapes match.

Use the owner's `spawnFailed` fact in the remaining consumers:

- inspectAdbClient reports exhausted host capacity (EAGAIN, EMFILE,
  ENFILE, ENOMEM) as a host failure to retry and no longer tells the
  caller to change REA_ADB_PATH. Path-resolution errnos come from a
  predicate the filesystem owner exports.
- runAdbCapture says adb could not be started instead of claiming an
  exit code for a process that never ran.
- The Darwin compiler probe words every spawn_failed outcome as a start
  failure, not a compilation failure.
- Asset catalog inspection treats any assetutil that never started as
  unavailable, not only ENOENT.

* fix(process): report host spawn capacity as a retryable constraint

Spawn errnos that report exhausted host capacity (EAGAIN, EMFILE, ENFILE,
ENOMEM) were classified by adb readiness alone. assetutil reported them as
an unavailable tool, which marked inspect_asset_catalog unavailable in the
session, and adb commands reported them as protocol failures.

Classify them once in the process capture owner and report a retryable
capacity constraint with recovery advice from assetutil and adb commands.

* docs(adb): describe host capacity failures from device operations

* fix(adb): report exhausted host spawn capacity as runtime unavailability

A host that cannot start adb for lack of process, memory or descriptor
capacity is not a configuration problem. Give it its own failure code and
map it to the runtime_unavailable provider rejection instead of
not_configured.

* fix(adb): report probe-time host capacity as a retryable constraint

A device operation whose adb version probe could not start for lack of host
capacity was refused as capability_unavailable without retryable. It now
reports the same retryable capacity constraint as a later adb command.

* fix(adb): keep the selected adb path in probe-time capacity errors

The retryable capacity constraint raised at the version probe dropped the
selected_binary and path_source diagnostics the refusal used to carry.

* refactor(adb): keep the spawn-failure fact to adb consumers

Restore the DMG reader, Darwin compiler probe and assetutil to main. The
capture owner still marks a never-started command, including the spawn
errors Node throws synchronously, and only the adb readiness probe and
adb commands read that fact.

* test(adb): assert spawn-failure facts instead of refusal wording

The new adb tests compared complete refusal sentences and banned an old
phrase. They now check the errno, selected path, path source and the
owner's spawn-failure marker, so wording edits do not break them.

* fix(adb): own one host-capacity remediation and cover the spawn route

The host-capacity constraint and the configuration failure each carried their own remediation sentence. AdbConfiguration now owns the text and both use it, so the constraint's remediation.action equals diagnostics.remediation.

The synchronous spawn-throw test now runs on Node's execFile route and on the owned spawn route adb uses (stopSignal). The provider test covers inspect_adb_client under EMFILE next to list_adb_devices, and the docs say which operations report the retryable capacity constraint and which report runtime_unavailable.

* fix(process): report EMFILE and ENFILE spawn failures without stdio

After an EMFILE or ENFILE spawn failure Node creates no stdio, so the
owned stop-signal route threw a TypeError while reading the streams and
the later spawn error went unhandled. Attach the error listener first and
capture absent streams as empty, so adb reports retryable host capacity.

* fix(adb): keep a completed push when host capacity stops its digest check

A capacity failure starting sha256sum came back as a retryable error even
though adb push had already written the file. Repeating the request with
overwrite=false is then refused because the destination exists.

Return the receipt with an unavailable device digest and name the capacity
failure in its limitations, so the caller is told the transfer is unverified
rather than advised to retry.

* docs(adb): list host capacity as an unverified push case

---------

Co-authored-by: t <t@t>

* test(gdb): expect configurable stream truncation diagnostics (#8965)

* test(gdb): expect configurable stream truncation diagnostics

* build(gdb): include prerequisite duplicate-import repair from #8884

* fix(javascript): resolve module-level Electron options in functions (#8960)

* fix(javascript): resolve module-level Electron options in functions

* fix(javascript): limit module option ancestry walk

* fix(javascript): preserve uncertain captured argument ordering

* fix(javascript): retain hoisted activation uncertainty

* fix(javascript): retain function ownership through loops

* fix(javascript): account for classic global activations

* fix(javascript): bind first activations to lexical identities

* fix(javascript): retain uncertain global activation timing

* fix(javascript): isolate receiver facts and share computed reads

* fix(javascript): retain projected and opaque global activations

* fix(javascript): refresh activation bounds as opaque effects grow

* fix(ci): format website watch directories without changing configuration

* fix(javascript): share source reads across opaque-effect updates

* fix(javascript): retain constructed-code global activation bounds

* fix(javascript): share runtime activation and receiver facts

* fix(javascript): reuse pattern reads and function positions

* fix(javascript): isolate copied paths and preserve runtime reads

* style(javascript): format migrated reference imports

* fix(javascript): normalize constructor activation and receiver effects

* fix(javascript): retain aliased receiver timing and lexical global this

* fix(javascript): preserve effect-free receiver identity across activations

* fix(javascript): retain outer activation and prototype effects

* fix(javascript): index implicit reads without deep path rescans

* fix(javascript): retain aliased prototype and parameter read uncertainty

* fix(javascript): index reflected reads through intrinsic invocation facts

* fix(javascript): retain unresolved global activation reads

* chore: refresh PR branch after review fix publication

* fix(javascript): retain projected receiver reads and cache method facts

* fix(javascript): retain inherited and implicit activation reads

* fix(javascript): retain caller-owned this uncertainty

* fix(javascript): retain reflected reads with unresolved spread arguments

* fix(javascript): preserve enclosing activation for decorators

* fix(javascript): track intrinsic literal prototype effects

* fix(javascript): retain catch activation from implicit reads

* perf(javascript): reuse effective keys for projected reads

* fix(javascript): retain possible caller-owned ambient effects

* fix(uninstall): preserve caller-selected Kuna caches during purge (#7921)

* fix(uninstall): keep a managed cache namespace whole when it holds a caller-selected Kuna cache

purge --purge-data reported a REA_KUNA_CACHE_DIR selection below the default Kuna cache as retained, then removed it together with its parent namespace. A namespace that contains the selection is now retained and reported, so the retained report is true.

Fixes #7344

* fix(uninstall): also keep a namespace equal to, or reached by symlink traversal from, the selected Kuna cache

Compare the namespace and the selection with the same normalization, treat an equal path as contained, and resolve existing paths before planning so a symbolic link followed by .. is judged by where it leads.

* fix(uninstall): judge a selection with parent traversal where the filesystem resolves it

Collapsing .. lexically contradicts the existing rule that parent traversal after a symbolic link leads elsewhere, and broke the retained-through-symlink-traversal test. Compare spellings without .. directly and resolve existing paths for the rest, so the symlink-parent case still purges the default cache while a selection that resolves into a managed namespace is retained.

* fix(uninstall): keep a namespace whole when the selection's location is unknown

A realpath failure other than ENOENT/ENOTDIR (for example EACCES under an
inaccessible parent) no longer counts as "absent". Each namespace that may
contain the caller-selected Kuna cache is retained instead of purged.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>

* fix(changed-behavior): withhold equality for unknowns and contradictions (#7624)

find_changed_behavior derived behavior_status from each process
comparison's aggregate status alone. An unchanged comparison whose
first_divergence was unknown (residual unknowns prevent proving no
divergence) and a consistent contradiction comparison both fell
through to observed_unchanged, with no unresolved finding and no
changed-behavior registry unknown.

An unchanged comparison with unknown divergence now counts as unknown
and adds one comparison-level unresolved first_divergence finding
carrying its reason, as artifact comparisons already do for coverage.
A contradiction status makes the aggregate unknown, and contradiction
dimensions are classified and counted as contradictions instead of
unresolved branches. Complete unchanged comparisons stay
observed_unchanged and changed comparisons with unknown localization
stay observed_changed.

Fixes #7384
Fixes #7383

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>

* fix(process): reject contradictory filesystem capture facts (#7631)

* fix(process): reject captures whose top-level filesystem facts contradict their checkpoints

A process capture records its filesystem state twice: files_before,
files_after and filesystem_effects at the top level, and the initial
and final filesystem_checkpoints. Validation never reconciled the two,
and comparison reads only the checkpoints. A caller-authored capture
recording a created file at the top level while its final checkpoint
was empty was therefore accepted and compared as unchanged.

Semantic validation now requires the initial checkpoint to match
files_before with no effects, and the final checkpoint to match
files_after and filesystem_effects. The native producer builds both
representations from the same snapshots, so produced captures are
unaffected; consistent created-file captures still compare as changed.

Fixes #7371

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(process): cover file-list checkpoint mismatches independently of effects

Every rejected case in the checkpoint-consistency test also disagreed on
effects, so removing both file-list comparisons left it passing. Add
initial and final checkpoint cases whose file lists alone disagree while
effects and coverage accounting stay valid.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>

* fix(process): report deadlines expiring during final cleanup (#7635)

* fix(process): report a deadline that elapses during final cleanup as a timeout

runOwnedCommand checked its absolute command deadline before awaiting
process cleanup, but on the ordinary successful path it consulted only
the caller's cancellation signal afterwards. A command whose deadline
expired while successful cleanup was still awaited therefore resolved
as success.

After cleanup, an elapsed deadline now throws OwnedCommandFailure with
reason "timeout" and the completed snapshot, as docs/tool-design.md
requires a final signal check after the last awaited finalization step.
Existing primary failures, caller cancellation and incomplete-cleanup
classification keep their precedence.

Fixes #7369

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(process): drive the cleanup-deadline regression with controlled time

The regression test gave output collection 100 ms of real time before
the deadline. On a busy worker the deadline could expire during
collection instead, taking a different failure path and failing the
test even with the fix. Use fake timers, wait until cleanup has
started, then advance past the deadline and release cleanup, so the
ordering no longer depends on worker speed.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>

* fix(enhanced): bound batch decompile input size (#5937)

* fix(artifacts): handle early ASAR extraction cancellation (#5672)

* fix(artifacts): own source errors during output setup

* fix(artifacts): join silent source destruction before returning

* fix(artifacts): retain source cleanup failures with primary errors

* fix(artifacts): join source finalization and classify secondary failures

* fix(firmware): separate source cleanup from output rollback

* fix(artifacts): retain live source cleanup dependencies

* fix(artifacts): preserve source failure completion and semantics

* fix(artifacts): retain scope cleanup owners and typed failures

* fix(artifacts): keep cleanup classification and admission recovery

When the operation completed and only scope cleanup failed, keep the cleanup failure's own reason instead of reporting io, matching main (fixes artifactProvider.cleanupRetry). When a typed primary is rebuilt with pending scope cleanup, carry its userMessage and ASAR header admission so callers keep the configured ceiling and setting.

* fix(artifacts): translate plain file-close failures through the reader path

The outer file-cleanup branch rebuilt every ArtifactFileCleanupFailure as a
ProviderAdapterError, so dyld reads lost their io, unavailable, format and
cancelled reasons and their exact file-cleanup cause. Compose separately only
when the failed primary owns its own translation (a domain error, source
failure or scope cleanup failure); raw and reader primaries are already
projected by the file failure with its exact lease.

* fix(artifacts): bound source destruction by cancellation and keep wrapper admission

After cancellation, SafeOutputTree.write could wait indefinitely for a source
whose destruction did not settle, both in the destroy join and in the
iterator's wait for close. Both waits now end at cancellation plus a fixed 1 s
grace, modeled on the process-output closure grace. A destruction that
outlives it is reported as incomplete source cleanup under an exact lease that
releases only once closure is observed without a late error.

ArtifactResourceCleanupFailure and SafeOutputSourceFailure now keep the
primary's admission, matching withCleanup.

* fix(artifacts): keep one settled wait while observing a stuck source

observeClosure raced the same pending close promise against a new timer every
10 ms, so a source whose destruction never settled accumulated one reaction per
poll for as long as it stayed open. Each poll now waits on its own promise that
the close listener or the unref'd timer settles, leaving one pending wait and
one close listener. The lifecycle test also asserts that a late close releases
the retained owner without an explicit retry.

* fix(artifacts): settle pending reads before cancellation

* test(artifacts): observe the consumed ZIP iterator on cancellation

* test(artifacts): validate projected cleanup resources before sorting

* test(mcp): reserve parent capacity for timeout recovery

* fix(artifacts): contain ASAR cancellation before output consumption

* test(artifacts): hash ASAR cancellation fixture bytes

* fix(decompile): retain inventory limitations and selection (#8466)

* fix(decompile): retain inventory limitations with the latest selection

The manifest and decompile index dropped procedure-inventory
limitations, so a directory separated from its Evidence response could
not explain why functions were selected or omitted. Keep those
limitations on the manifest and in a latest_run index record that also
names the filter and counts that produced them. Older runs remain
represented only by their retained function records.

Fixes #8355

* test(decompile): surface export errors and check function caveats

Address review findings on the inventory-limitation regression:

- Throw the typed export error instead of returning from a failed Result.
- Assert historical function records keep their own pseudocode caveats
  and do not receive the latest inventory warnings.

* fix(pyinstaller): leave PE carrier binary members unmarked (#6730)

The Windows bootloader sets no execute bit on extracted ARCHIVE_ITEM_BINARY
members (the S_IXUSR fchmod in pyi_archive.c is #ifndef WIN32). Mark type b
members executable only when the carrier dialect is posix.

* fix(jeb): reconnect after stale MCP sessions (#3754)

* fix(jeb): reconnect after stale MCP sessions

* fix(jeb): preserve failures for overlapping MCP requests

* fix(jeb): make cleanup operations explicit and stabilize timeout fixtures

* fix(setup): flag unresolved migrated Claude Desktop storage (#8971)

* fix(setup): flag unresolved migrated Claude Desktop storage

* fix(setup): preserve Claude MSIX process view when config is unresolved

* fix(enhanced): restore batch input record limit

* docs(tool-design): audit agent workflow guidance (#8439)

* docs(tool-design): audit agent workflow guidance

* docs(tool-design): check deployed guidance versions

* fix(cli): align ADB directory and package query schemas (#8974)

* fix(cli): align ADB directory and package query schemas

* fix(cli): preserve ADB selector correction details

* fix(devicetree): reject duplicate node paths in Evidence (#8970)

* fix(pe): classify valid DOS targets as unsupported (#7530)

fix(pe): classify confirmed DOS targets as unsupported

Signed-off-by: Rudy Celekli <rudy@gradiahq.com>

* fix(native): reject nonzero reserved ELF dynamic symbols (#7528)

fix(native): validate the reserved ELF dynamic symbol

Signed-off-by: Rudy Celekli <rudy@gradiahq.com>

* fix(evidence): traverse large source link sets safely (#8457)

* fix(verification): use inspected Ghidra JDK (#8440)

* fix(mcp): clarify retained dossier handoff in crash prompt (#8437)

* fix(evidence): clarify unsupported view recovery (#8412)

* fix(evidence): clarify unsupported view recovery

* fix(evidence): explain sensitive capture view refusal

* test(ghidra): check regex recovery at its owning boundary (#8578)

* test(ghidra): check structured snapshot profile mismatch (#8536)

* test(ghidra): check retained historical snapshot evidence (#8381)

* test(ghidra): check retained historical snapshot evidence

* test(ghidra): select historical observations by address

* test(cli): cover Frida argument admission and spawn ordering (#3356)

* fix(cli): reject spawn arguments in Frida attach mode

* test(cli): remove redundant Frida recorder assignments

---------

Co-authored-by: Kaoru0822 <208281322+kaoru0822-kitauji@users.noreply.github.com>

* fix(ghidra): report restricted-host temp write denial on Windows (#8889)

* fix(ghidra): report restricted-host temp write denial on Windows

Add a Windows doctor check that creates and deletes a file under os.tmpdir(), and classify a denied java_home.save in Ghidra startup output with its path, Win32 error 5, and TMP/TEMP remediation. The probe covers REA's own process only; a host that restricts only child processes is reported from the child's output at startup.

Fixes #7075

* fix(ghidra): probe the session root and retain failed probe cleanup

The Windows doctor temp_directory probe now writes under ghidraSessionRoot(), the same root Ghidra session runtimes use, instead of os.tmpdir(), which can differ when the inherited temp path has a dot-prefixed element. A probe file whose removal fails is retained on the doctor resource owner so doctor shutdown retries the removal; the result still reports its path.

* fix(cli): normalize exit status on worker cleanup failure (#8049) (#8050)

* fix(cli): normalize exit status on worker cleanup failure (#8049)

* test(cli): verify SDK output status and finalization rejection on exit

* ci: retrigger checks

---------

Co-authored-by: Sarthak Pandey <sarthak@email.com>

* fix(gdb): keep inferior-tty verification for read-only queries (#5539)

* fix(gdb): keep TTY verification across read-only inferior-tty inspection

The console command path cleared `inferiorTtyVerified` before dispatching
any command whose text merely mentioned `inferior-tty`, so the read-only
`show inferior-tty` query permanently revoked a persistent session's
verified output sink; no in-session path ever restored the flag, and a
later close of a live session failed detach verification with
capability_unavailable.

Exempt the exact read-only query forms (`show inferior-tty` and the MI
`-inferior-tty-show`) from the output-mutation predicate; every other
command mentioning the TTY setting keeps revoking, so mutating commands
still fail closed and detach keeps re-reading the live TTY before
detaching. Cover the query forms, composite commands, and the
inspect-then-close detach path with regression tests.

Fixes #5099

* test(gdb): classify show inferior-tty in the one-shot table and rename the TTY classification table

- Add a 'show inferior-tty' row to the 'classifies one-shot GDB
  commands' table: the read-only query no longer invalidates the detach
  proof, a user-visible one-shot behavior change.
- Rename the 'classifies read-only inferior TTY queries as non-mutating'
  table to 'classifies inferior TTY commands' since two of its rows are
  mutation cases.
- Assert via the existing recorded-commands array that the inspected
  'show inferior-tty' text is actually dispatched, and add an
  execute-path assertion that the MI '-inferior-tty-show' form leaves
  the verified-sink flag intact (defensive exemption: REA's own MI calls
  do not route through this gate).

---------

Co-authored-by: akushonkamen <akushonkamen@users.noreply.github.com>

* fix(browser): report an out-of-range generated position as a selection fault (#7133)

trace_web_source_location reported a well-formed generated_position past
the end of the selected script as invalid_format on generated_position,
with no bounds, so callers were told their input was malformed and not
which coordinate to change. Report out_of_range on the line or column
that is past the end, with its valid bounds, as export_web_scripts and
inspect_web_network_capture now do for their selections.

The position scan now returns the bound it ran past, so the offset and
the reported limit come from one pass and cannot disagree on line
terminators.

Fixes #7132

* fix(captures): classify unresolvable capture paths as capture_path input (#7814)

* fix(captures): classify unresolvable capture paths as capture_path input

Fixes #7636

* test(captures): cover unresolvable descriptor paths

---------

Co-authored-by: Abelo9996 <Abelo9996@users.noreply.github.com>
Co-authored-by: morluto <76467478+morluto@users.noreply.github.com>

* fix(apple): preserve exact integer precision with post-table plist objects (#8910)

* fix(javascript): resolve electron findings through aliases of interop results (#8914)

* fix(javascript): resolve electron findings through aliases of interop results

* fix(javascript): resolve interop aliases iteratively and check target mutations

* fix(javascript): retain possible writes through uncertain aliases and guard positive reads

* perf(javascript): cache alias change status across semantic interop lookups

* fix(javascript): transient Windows private-runtime source-transfer (#8769)

* fix(javascript): transient Windows private-runtime source-transfer

Parent source-transfer into the Windows private runtime root failed with
EPERM on path-based exclusive create. Write through a native transient
private-runtime path that closes the handle after flush so per-job rm
still works, and yield around the sync write so abort deadlines can fire.

* fix(javascript): yield timer phase before Windows source-transfer write

* fix(il2cpp): reject module image references outside retained inventory (#8956)

* fix(ida): admit Docker host-gateway names as local MCP hosts (#8932)

Containerized REA reaches an IDA MCP server on the container host through
host.docker.internal (Docker, Podman compatibility) or
host.containers.internal (Podman). The HTTP registration refinement only
admitted localhost, 127.0.0.1 and [::1], so doctor reported the valid
gateway registration as invalid_configuration.

Admit both gateway names in the registration's local-host set. The
refinement still requires http or https, no URL credentials, and refuses
every other host.

Fixes #8925

* fix(mcp): report target after failed open (#8613)

* fix(mcp): report target after failed open

* test(session): cover failed open receipt ownership

* test(session): verify restored target receipt

* test(mcp): retain target on snapshot mismatch

* test(mcp): retain oversized open failure receipts

* test(cli): avoid continuing session receipt in one-shot errors

* fix(mcp): report provider after failed switch

* test(ghidra): verify failed open preserves annotations

* test(mcp): join queued receipt request before cleanup

* test(session): assert open failure receipts in lifecycle suites

* test(session): keep open-failure receipt checks within function limits

Move the provider-collision case and snapshot fixture setup out of the
functions that grew when both failure receipts were asserted.

---------

Co-authored-by: Cursor Agent <cursoragent@cursor.com>

* fix(prompts): include existing static artifact investigation routes (#8972)

* fix(prompts): include existing static artifact investigation routes

* fix(prompts): preserve workflows in existing family scopes

* fix(prompts): require readers for Apple resource routes

* fix(rizin): keep debug targets off the debugger command stream (#8647)

* fix(rizin): keep debug targets off the debugger command stream

A Rizin debug target inherited Rizin's stdin, which is REA's command
stream. Once resumed, a target that reads stdin consumed REA's commands,
so close returned cleanup_incomplete and the one-shot CLI hung.

Route the target's stdin to the caller-selected TTY alongside stdout and
stderr. Before detaching, refuse a target whose stdin is still the command
stream, so a Rizin or backend that ignores the key gets a specific,
retained failure instead of a resumed target and a timeout.

Fixes #8642

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(rizin): keep the stdin test launcher's descriptors under dash

The launcher gated its target with `cat "$2" >/dev/null`. dash applies a
simple command's redirection to the shell itself until the command returns,
so on Ubuntu the waiting shell's fd 1 was /dev/null, and that shell is the
target REA reads in /proc. All 8 Linux-gated tests then failed the existing
output-descriptor check. macOS /bin/sh is bash, which redirects only in the
forked child, so this did not show locally.

Gate without any redirection. Production code is unchanged.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(rizin): reject unmodeled commands and own cleanup at acquisition

Address review of the stdin regression tests.

The launcher accepted any unknown line, so the marker that followed could
complete it, and assertions only checked that commands were present. An
added `dc` or a repeated `olj` still passed. It now records an unknown line
and exits, and the tests pin the exact command sequence.

Cleanup hung off module state assigned after setup finished, so a failed
setup left its directory and terminal child behind. Each resource now
registers its own finish hook when acquired, using createTestTempDirectory.

Success checks throw the typed error instead of asserting `.ok`, and the
refusal probe no longer sits inside a loop and conditional.

Production code is unchanged.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>

* fix(ci): align tests with current evidence contracts

* feat(native): report binary hardening for ELF, PE and Mach-O (#8524)

* feat(native): report binary hardening for ELF, PE and Mach-O

Documents inspect_binary_hardening and its CLI equivalent, including
per-property states, supporting evidence, read budgets, and one report
per Mach-O slice. Explains that missing protection imports remain
unknown, signature presence does not establish validity, and hardened
runtime requires inspect_signature. Adds hardening links throughout the
documentation. The supplied diff also removes the advanced CodeQL
workflow and configuration, along with snapshot-binding mismatch
guidance.

* fix(native): validate declared payloads and dynamic tables before hardening rows

Run the shared range checks for ELF, read imports from the dynamic tables
rather than section metadata, and keep an unresolved symbol count apart from
an absent table. Check every Mach-O command before building rows and retain
only the offsets the rows need.

Make the verifier's readelf output wide, check the emitted format before
parsing Mach-O, and place the sources before the libraries in the link.

* fix(native): share Mach-O segment admission with hardening reads

A segment with a section count its cmdsize cannot hold passed the hardening
reader and could enable restrict_segment. Move the size, section count and
file range checks to a shared admission that readMachoImage and the hardening
reader both use, and pin the ELF load-size case with a regression test.

* fix(hardening): reject Mach-O section payloads past the slice and empty ELF interpreters

Segment admission never checked each section's payload range, so a
file-backed section past the slice still produced rows. Decode sections with
the section header owner and mark the slice malformed when a payload leaves
it; zero-fill and empty sections own no file bytes and are exempt.

admitInterp accepted a NUL first byte in a longer extent, which counted an
empty interpreter as PIE evidence. It now requires a nonempty path.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01KuWHGvzJkrhCqjtEHUwqyH

* fix(native): read CFG instrumentation from decoded GuardFlags

Use the IMAGE_GUARD_CF_INSTRUMENTED flag that guardFlagRecord already
decodes instead of masking the raw GuardFlags word a second time.

* fix(native): reject ELF table spans a second PT_LOAD remaps

The hardening reader mapped DT_STRTAB, DT_SYMTAB and hash tables through
the one PT_LOAD containing the table's first address. A second PT_LOAD
starting inside the table could map the rest of it from other file bytes
and the reader still reported parsed import evidence.

Cap each mapping at the next PT_LOAD that starts inside it, reject a
requested range that crosses that boundary, and stop hash reads at the
same limit, matching the conflicting-mapping refusal in readElfSymbols.

* fix(native): dedupe ELF note tables only on shared boundaries

The hardening reader dropped any note table whose bytes another table
already covered. A covering SHT_NOTE can hold a non-GNU note whose
descriptor is itself a complete GNU property note, while PT_NOTE names
that inner note directly. Walking only the outer stream missed the GNU
marker and reported CET disabled.

Drop an alias only when it starts and ends on boundaries of admitted
tables, which are note boundaries of the walked streams. Any other
covered alias leaves the feature rows unknown, as a partial overlap
already does.

* fix(native): admit every Mach-O symbol record after a canary match

The Mach-O stack protector scan returned as soon as it found an
undefined ___stack_chk_fail, so a later undefined symbol whose n_strx
lay outside the string table was never checked. The same damaged table
parsed or failed as malformed depending only on record order.

Keep the match and finish the bounded record walk. Records after the
match are only checked against the string table bounds, so their names
are not read or charged to the scan budget. The ELF reader already
admits its whole symbol table before matching names.

* fix(native): accept ELF load aliases with the same file translation

The hardening reader treated every PT_LOAD that starts inside a table,
or that also contains the table's address, as a conflicting mapping.
A load with the same address-to-file translation names the same file
bytes, so tables it overlaps still have one interpretation, and the
canonical ElfLoadMap already merges such spans.

Treat equivalent loads as one interpretation. A load with a different
translation, or the zero-filled tail of an equivalent load, still ends
the usable range, so a remapped table is still rejected.

* fix(native): keep same-span ELF note tables with different alignments unknown

A section and a program header that share endpoints were treated as one
note stream even when their effective note alignments differed. Walking the
same bytes at 4 and 8 can frame different notes, so dropping the second table
could hide a GNU property word and report CET or BTI as disabled.

Require matching effective alignment at both endpoints, and no alignment
change inside the covered span, before treating a table as an alias.
Otherwise mark the feature rows unknown. The fixture's .note.gnu.property
section now declares the class's note alignment, as toolchains emit it.

* refactor(native): read LC_SYMTAB through the shared fixed-word decoder

Move the Mach-O fixed uint32 command layouts out of MachoCommandNames
into domain/apple/machoLoadCommands so there is one owner of those
offsets. MachoCommandNames and the hardening reader now both decode
through it; the hardening reader keeps its own bounds and import policy.

* fix(native): skip Mach-O common definitions in canary imports

A common definition sets N_UNDF|N_EXT like an import but stores its
allocation size in n_value. An object holding only
`int __stack_chk_fail;` therefore reported stack_protector: enabled.

Require a zero n_value before an undefined external counts as an
import, for both nlist widths.

* refactor(native): read linkedit data commands through the shared fixed-word decoder

readMachoLinkeditDataCommand reproduced the dataoff/datasize offsets that
FIXED_WORD_FIELDS already owns. Take the command and decode through
decodeMachoFixedWordFields, as readMachoSymtabCommand does, keeping the
truncation and endianness behavior.

* fix(native): skip empty SHT_NOTE sections in ELF hardening

A zero-sized SHT_NOTE owns no bytes, so the section directory marks it
not file-backed and the hardening reader rejected the whole image as
malformed, while readElfImage accepted the same bytes. Skip empty note
sections before the file-backing check; they have nothing to walk.

* fix(scripts): run hardening verifier commands through the shared owner

The binary hardening verifier started its probes and compiler drivers with
raw spawnSync, which bypassed the src/process/ supervision that AGENTS.md
requires. Every launch now goes through createVerifierCommands, and the
temporary root is removed only after the owner closes cleanly.

* fix(scripts): clean up hardening verifier commands on Ctrl-C

SIGINT or SIGTERM ended Node before withVerifierCleanup ran, so detached
compiler trees and the temporary root could outlive the verifier. The
verifier now turns those signals into an abort that every owned command
receives, so cleanup closes the owner and removes the root before exit.

* fix(scripts): fail the hardening verifier when a signal lands outside a command

Only the owned commands read the interruption signal, so a SIGINT or
SIGTERM during the final cleanup or between commands was recorded and
then dropped, and the verifier exited 0. After cleanup settles, the
verifier now throws the interruption reason. A failure the operation or
its cleanup already raised still leaves first and is not replaced.

* fix(native): fail Mach-O slices with a malformed encryption command

The hardening reader turned every malformed status from the shared
encryption reader into an unknown `encrypted` row, so a short
LC_ENCRYPTION_INFO_64 or an encrypted range past the slice still left the
slice parsed with a full report.

Only two conflicting encryption commands stay an unknown row now. Any other
encryption defect fails the slice like other structural command failures.

* fix(native): ignore STB_LOCAL undefined ELF symbols as imports

A local undefined __stack_chk_fail or __memcpy_chk is never resolved
against another object, so it does not establish an external import.
Skip STB_LOCAL bindings when reading protector signs, and give the
fixture's positive symbols STB_GLOBAL binding.

---------

Co-authored-by: Matt Van Horn <455140+mvanhorn@users.noreply.github.com>
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>

---------

Signed-off-by: Rudy Celekli <rudy@gradiahq.com>
Co-authored-by: Kaoru0822 <208281322+kaoru0822-kitauji@users.noreply.github.com>
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
Co-authored-by: Edgar Arakelyan <edgar.arakelyan@scale.com>
Co-authored-by: ShuaixinHuang <1836656514@qq.com>
Co-authored-by: highmachs <samarjeeth06@gmail.com>
Co-authored-by: hhang <17309584214@163.com>
Co-authored-by: hhang <169027046+xu91102@users.noreply.github.com>
Co-authored-by: Paritosh Lahre <155938586+SandstromPL@users.noreply.github.com>
Co-authored-by: Adolanium <94890352+Adolanium@users.noreply.github.com>
Co-authored-by: 김준호 <101695482+chordpli@users.noreply.github.com>
Co-authored-by: t <t@t>
Co-authored-by: Hasan Zayni <36798269+dark13b@users.noreply.github.com>
Co-authored-by: Salman Almutairi <141588124+salmanalmutairi1@users.noreply.github.com>
Co-authored-by: Lucien <164857476+dakjdakd@users.noreply.github.com>
Co-authored-by: RRFZ <247457381+Plastic-time@users.noreply.github.com>
Co-authored-by: 2SinceJuly <hongjxiao@gmail.com>
Co-authored-by: Wade <160517347+Sriram-PR@users.noreply.github.com>
Co-authored-by: Martin Klein <36695017+flitzrrr@users.noreply.github.com>
Co-authored-by: morluto <76467478+morluto@users.noreply.github.com>
Co-authored-by: Rudy Mizrahi Celekli <47457359+rudycelekli@users.noreply.github.com>
Co-authored-by: xin zhuang <65798732+1052326311@users.noreply.github.com>
Co-authored-by: Beqa <91750923+BeqaKs@users.noreply.github.com>
Co-authored-by: NoThing <sarthakpandey5667@gmail.com>
Co-authored-by: Sarthak Pandey <sarthak@email.com>
Co-authored-by: akushonkamen <74654766+akushonkamen@users.noreply.github.com>
Co-authored-by: akushonkamen <akushonkamen@users.noreply.github.com>
Co-authored-by: amyanger <57688398+amyanger@users.noreply.github.com>
Co-authored-by: Abel Yagubyan <abelyagubyan@berkeley.edu>
Co-authored-by: Abelo9996 <Abelo9996@users.noreply.github.com>
Co-authored-by: Jiabin Yin <54463072+Nolkee@users.noreply.github.com>
Co-authored-by: Cursor Agent <cursoragent@cursor.com>
Co-authored-by: Mohamed Ayoub Eleuch <58662566+AyoubElleuch@users.noreply.github.com>
Co-authored-by: Kaoru0822 <kanadekitauji@proton.me>
Co-authored-by: Matt Van Horn <mvanhorn@users.noreply.github.com>
Co-authored-by: Matt Van Horn <455140+mvanhorn@users.noreply.github.com>
Co-authored-by: gensokyo-dev <gensokyo-dev@users.noreply.github.com>
2026-11-06 02:06:39 +08:00
morlutoandCursor Agent 71f680d7c1 feat(mcp): page retained instruction references (#8594)
* feat(mcp): page retained instruction references

* test(mcp): verify oversized instruction reference recovery

* test(mcp): follow instruction reference continuations

* test(mcp): validate continuation source kind

---------

Co-authored-by: Cursor Agent <cursoragent@cursor.com>
2026-11-05 04:30:52 +08:00
星闌 b1b6cb64c2 fix(analysis-view)!: distinguish unavailable native collections (#8291) 2026-11-04 23:53:45 +08:00
morluto 55078b9f57 feat(mcp): page retained incoming reference addresses (#8591) 2026-11-03 02:13:21 +08:00
morluto df25bc8068 fix(ghidra): retain relocation symbol observations (#8531)
* fix(ghidra): retain relocation symbol observations

* test(ghidra): verify named relocation symbols through CLI

* fix(ghidra): clarify verification and supervise test commands

* test(ghidra): share load verification guidance
2026-11-01 23:53:56 +08:00
morluto 53363166f0 fix(evidence)!: validate native view parent predicates (#8451)
Reject native view sources whose predicate disagrees with the selected operation. Use the original predicate for existing Evidence; do not alter a record without recomputing its identity.
2026-11-01 20:27:34 +08:00
morluto 60149282fc test: strengthen integration oracles and verification (#8295)
* test: strengthen integration oracles and verification

* test: bound lifecycle gates and strengthen workflow checks

* test: verify complete paged and extracted results

* test: preserve bytecode and cancellation evidence

* test: strengthen retained evidence and fixture cleanup

* test: require cross-projection bridge identities

* test: retain fixture owners through cleanup failures

* test: verify graph examples and project selectors

* test: tighten provider and lifecycle regressions

* test: consolidate hex coverage and bound cutter cleanup

* test: bound subprocess output waits and strengthen graph checks

* test: check mcp recovery and preserve cleanup owners

* test: verify structured mcp argument failures

* test: preserve artifact cleanup and gdb limit evidence

* test: preserve evidence identities and bound provider gates

* test: retain browser and comparison cleanup owners

* test: bound startup and strengthen fixture oracles

* test: bound lifecycle gates and verify recovered evidence

* test: verify public outcomes and lifecycle ownership

* test: assert precise evidence and release lifecycle gates

* test: verify selected facts and bound cleanup waits

* test: check retained evidence and decoded records

* test: verify final reports and retain cleanup ownership

* test: bound reviewed startup gates and retain cleanup

* test: verify PE errors and preserve MCP cleanup

* test: preserve MCP fixture cleanup ownership

* test: release provider gates before late startup
2026-11-01 00:15:28 +08:00
Kaoru0822andClaude Opus 5.5 bfa082f777 fix(analysis-view): keep inferred confidence on views of inferred Evidence (#8099)
createAnalysisViewEvidence chose view confidence from the view result kind
only, so every summary, page or item view of an inferred parent
(compare_source_to_bundle, inspect_evm_interface, partially resolved
inspect_il2cpp_metadata) was sealed as derived while keeping the parent's
authority. A projection never makes its facts more certain: an inferred
parent now yields inferred views through CLI and MCP alike. Observed and
derived parents keep their existing view confidence and identities.

Fixes #8098

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-10-30 00:59:53 -07:00
gensokyo-devandEntrpi 37827af591 feat(artifacts): compare inventories from Evidence sources (#7869)
* feat(artifacts): compare artifacts by Evidence reference and from the CLI

compare_artifacts made agents send back the complete inventory Evidence
that REA already retains, and the CLI had no artifact comparison.

Each side of compare_artifacts now takes exactly one of: complete inline
Evidence (unchanged), {kind: "retained-evidence", evidence_id}, or
{kind: "evidence-file", path, evidence_id?}. The two references are the
sources inspect_analysis_view accepts; both tools now compose one
definition in evidenceReference.ts. A summary still resolves to its exact
retained parent, and every source form gives the same comparison Evidence.
An unresolvable retained reference is refused with a typed missing
reference error.

The application layer owns source resolution and the comparison Evidence,
so MCP and the new `rea compare-artifacts` command share one workflow.
readEvidenceFileSource reports bundle-selection refusals at the caller's
own field path.

* refactor(artifacts): resolve compare_artifacts sides like compare_functions

compare_functions, compare_wasm_interfaces and the JavaScript application
comparisons name each side with evidenceInputSchema and resolve it with
resolvePairedEvidenceRequest. compare_artifacts reached the same result
for inline and retained sides through its own dispatch.

evidenceSourceInputSchema now extends evidenceInputSchema with the
Evidence-file reference, and resolvePairedEvidenceSources sends inline and
retained sides to the same resolveEvidenceInput and file sides to the
shared Evidence file reader. compare_artifacts uses both, so the forms it
shares with compare_functions are parsed and resolved by one owner. The
advertised input schema is unchanged.

* docs(cli): point rea compare to compare-artifacts for inventory contents

rea compare (compare_bundles) compares records by Evidence identity and
explicit pairs and never reads artifact contents, so two build
inventories stay unresolved there. Its help and the CLI guide now name
compare-artifacts for that comparison.

* fix(artifacts): resolve summary parents within Evidence source bundles

* perf(evidence): reuse file-owned immutable authentication proofs

* test(evidence): inject failures at both authentication boundaries

---------

Co-authored-by: Entrpi <entrpi@proton.me>
2026-10-29 03:12:03 +08:00
morluto 7cbf375d01 fix(evidence): retain authenticated parents on cancellation 2026-10-27 12:31:33 +08:00
morluto effb796027 fix(evidence): validate retained views by semantic identity 2026-10-27 12:14:36 +08:00
morluto 5f9f13d77b fix(evidence): preserve view identity and cancellation outcomes 2026-10-27 12:12:34 +08:00
morluto 2f27d3ac92 fix(evidence): separate source and presentation identity 2026-10-27 12:06:29 +08:00
morluto 3e8923c6eb fix(evidence): share queued cancellation handling 2026-10-27 12:06:15 +08:00
morluto 3431541073 fix(views): honor cancellation before admission 2026-10-27 08:18:40 +08:00
morluto 5261340397 fix(evidence): retain analysis view environment 2026-10-27 07:44:04 +08:00
morluto 82fd223638 refactor(native): consolidate provider-neutral analysis contracts
Move shared function, dossier, inventory, reference and output semantics from the legacy Hopper module to native domain owners. Migrate provider, adapter, test and verifier consumers directly.
2026-10-27 06:43:53 +08:00
morluto ccdeda7a27 fix(inputs): centralize admission and preserve caller selections
Move shared request parsing into its application owner, migrate all consumers, and remove six duplicated admission blocks while preserving cancellation and validation policy.

Keep operator-selected JavaScript paths in verifier parent Evidence while retaining canonical comparison guards. Validated with 204 passing tests, 3 Linux-x64-only skips, typecheck, lint, and test discovery.
2026-10-26 17:35:18 +08:00
gensokyo-dev 4c8647a706 feat(native): page retained observations and source context (#7146)
* feat(native): page retained observations and source context

* docs(native): record complete observation workflow measurements

* fix(native): preserve context coverage and overflow recovery

* fix(benchmarks): finalize partially initialized observation probes

* docs(native): publish reviewed workflow verification
2026-10-26 00:32:01 +08:00
gensokyo-dev f69c52a1cf feat(native): page retained load-image observations (#7134)
Add optional native load-image summary delivery and retained selected-row pages through shared CLI/MCP analysis views. Preserve source verification, provenance, unavailable collections, exact row identity and opt-in byte/check payloads.

Preserve direct caller paths during shared CLI summary publication and cover raw/DOL projection contracts through the actual SDK. Real Ghidra ELF CLI/MCP captures, retained and file-backed pages, focused regressions and static checks passed; the PR records existing main schema failures and the JavaScript resource-recovery CI uncertainty.
2026-10-25 21:50:42 +08:00
fc43e285ea feat(browser): retain compact scenario summaries and selected views (#7120)
Retain complete browser scenario Evidence while delivering compact summaries and selected step, event, transaction and text views through shared CLI/MCP workflows. Preserve initial CLI failures across cleanup retries and validate with real Chromium/TodoMVC.

Co-authored-by: Kaoru0822 <208281322+kaoru0822-kitauji@users.noreply.github.com>
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-10-25 19:03:06 +08:00
69a2faa120 feat: add FreeBuff agent support for REA setup (#2736)
* feat: add FreeBuff agent support for REA setup

Register FreeBuff as a supported setup client using the shared user
agents directory (~/.agents/mcp.json with mcpServers, skills in
~/.agents/skills), which matches what FreeBuff Desktop loads. Adds the
client definition, boundary tests, supported-agent docs, and the skill
reference client list.

* fix(freebuff): detect FreeBuff from its profile directory, not shared .agents

The ~/.agents marker made FreeBuff appear installed for any home where
REA had installed shared skills (the default skill destination, also
Gemini CLI's), producing false doctor failures. Detect FreeBuff from
its own fixed profile directory ~/.config/freebuff-desktop instead,
and add a regression test covering a home with only the shared agents
skill directory.

* fix(setup): require product evidence for FreeBuff discovery

Address review findings at their producing boundaries and preserve directly affected consumers. Source inspection and git diff --check completed. Tests and automated checks were not run at the user’s explicit request.

* fix(uninstall): retain unverified shared client configuration

* fix(clients): preserve scoped removal evidence

* fix(doctor): omit undefined selectedClientIds under exactOptionalPropertyTypes

Passing selectedClientIds explicitly as undefined fails typecheck on this
branch (TS2379), which blocks the focused test workflow before any test
can run. Spread the option only when defined.

* fix(update): separate ownership evidence from product applicability

rea update's maintenance scope inspected only product applicability
evidence, so when a FreeBuff profile was absent but REA already owned a
version-pinned row in the shared ~/.agents/mcp.json, the plan omitted
freebuff and left the integration stale. FreeBuff now declares its
registration storage as shared, which proves ownership of an owned row
but never product applicability, and maintenance requests ownership
evidence through that declaration instead of reinterpreting the shared
paths. Doctor and setup keep readiness evidence, foreign rows stay out
of maintenance, and the Doctor exactOptionalPropertyTypes fix makes the
focused test workflow runnable.

* test(dotnet): split oversized operand extent diagnostics describe

The describe callback reached 162 lines (max 150), failing
max-lines-per-function and blocking the pre-push check for this branch.
Move the single-case extent scenarios into their own describe; no test
content or order changes.

* fix(update): preserve ZCode's disabled shared registration during maintenance

The shared user agents file doubles as ZCode's fallback, where
`enable: false` disables the registration. Ownership-based maintenance
read that row as a FreeBuff registration, whose format does not
recognize the flag, so the row was selected and the emitted setup
command rewrote it, dropping the flag and silently re-enabling a
registration the user had disabled.

registrationActivation now honors `enable: false` for any client whose
registration storage is shared, because the activation fact binds every
reader of that storage. Maintenance leaves such rows out; doctor
reports them as stale, matching ZCode's own treatment.

* fix(doctor): let explicit client selection authorize the config read

When an ACL or an inaccessible shared parent made every access probe
fail, a client selected by name was omitted before the configuration
read could return its unreadable-config detail, so doctor reported it
as not detected with installation remediation: an unresolved selected
path collapsed to absence.

An explicit selection now authorizes the read outright and the probes
serve automatic discovery only. A selected client with an unreadable
config reports invalid with the read failure; one with no config
reports missing; automatic discovery still probes before inspecting.

* fix(uninstall): share shared-storage checks between ZCode and FreeBuff

clients() queued ~/.agents/mcp.json twice: once as zcode_fallback and once
as freebuff. ZCode has no discoveryPaths, so its strict read still blocked
uninstall on malformed shared text, despite FreeBuff's new retain-and-continue
behavior. For a valid owned entry, ZCode removed it first, so FreeBuff reported
skipped rather than removed.

Make the shared file's checks and removal one shared decision:
- Add zcodeDiscoveryPaths to ZCode so it has its own applicability evidence.
- Gate zcode_fallback push on applicable, not just zcodeFallbackPath presence.
- Report shared storage ownership as one decision for both clients:
  FreeBuff and ZCode now use clientOwnershipEvidencePaths together, so a
  recognizable REA-owned row proves ownership once for the shared storage, and
  both clients report the same result consistently.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix(uninstall): merge duplicated host and prove shared ownership from owned rows

Uninstall.ts declared systemUninstallHost twice, preventing module load,
with the exported copy returning only clients and the second copy missing
clientWriteBlocker. Merge into one exported host carrying both blockers.

hasOwnershipEvidence used access() existence, so an unrelated malformed
~/.agents/mcp.json established ownership and blocked every removal.
Ownership now requires a readable, recognizable REA-owned row via the
injected filesystem, so unrelated shared data stays retained.

Also cover ZCode discoveryPaths in its path test.

* fix(uninstall): keep denied product-local configurations fail-closed

Unproven product applicability marked every configuration path of that client unverified, so a denied ZCode profile turned an unreadable product-local config into a retained item: uninstall continued and could report complete with REA still registered. The retain-and-continue exception now applies only to storage REA does not own, classified once by clientSharedRegistrationPaths (shared configuration plus another product's same-scope fallback).

Covers the Greptile P1 on Uninstall.ts. Validation: the new test fails on the pre-fix Uninstall and passes after it; freebuff/zcode/updateMaintenance/bom/dsh suites green; clientLifecycle, clientRegistrationStatus and claudeDesktop keep the same 8 host failures as the pre-merge baseline (symlink EPERM, stale-vs-aligned on Windows).

* fix(update): retain FreeBuff when ZCode reads the shared fallback

Maintenance deduplicated clients on the path each inspection read, so ZCode's fallback view of ~/.agents/mcp.json marked that file "covered" and dropped FreeBuff from the scope. ZCode setup writes ~/.zcode/cli/config.json and deliberately leaves the fallback untouched (docs/client-configuration.md), so the emitted command refreshed only ZCode while the shared row both products load stayed pinned to the old package version. Each setup action rewrites only its own configuration path and no other action rewrites the shared row, so every selected client keeps its own maintenance action; the read-path covered/deduped filter is removed.

Covers the Codex P2 on UpdateMaintenance.ts:104. Validation: the new regression fails on e2fdec384 with {clients:["zcode"]} and passes with {clients:["freebuff","zcode"]}; updateMaintenance 31/31, setupClientConfigCleanupOwnership, cliUpdateAlias, updateOutput, cliStartupImports green; tsc --noEmit, oxlint (0 errors) and oxfmt --check clean; clientRegistrationStatus keeps the same 4 symlink/stale-vs-aligned failures this Windows host has on base e2fdec384 (verified by stashing the change).

🤖 Generated with Codebuff
Co-Authored-By: Codebuff <noreply@codebuff.com>

* fix(uninstall): preserve completed reads as shared ownership evidence

hasOwnershipEvidence caught every read failure and kept scanning, so a handle-close failure after a successful read — a RegularFileCleanupFailure whose completed outcome still contains the exact shared-file text — was discarded as "no proof". FreeBuff's applicability-unverified storage therefore never got its ownership fact, and once the retained handle blocked later reads, readClientConfiguration downgraded them to retained: inspection passed, removals soft-failed, and runUninstall(true) could purge REA data while the active shared registration remained. The catch now parses the completed outcome for the ownership text while missing or unreadable storage and malformed data keep their proves-nothing semantics, so ownership holds and every later read failure stays blocking.

Covers the Codex P2 on Uninstall.ts:252. Validation: the new regression fails on 4dbfdf1a9 (freebuff reports no blocking failure while the poisoned-scope error lands on claude_code) and passes after; setupClientConfigCleanupOwnership 25/25; the other 21 Uninstall-consumer suites are byte-identical to base 4dbfdf1a9 (61 pre-existing Windows-host failures: symlink EPERM, stale-vs-aligned); tsc --noEmit, oxlint (0 errors, same 6 warnings) and oxfmt --check clean.

🤖 Generated with Codebuff
Co-Authored-By: Codebuff <noreply@codebuff.com>

* fix(uninstall): keep owned-row proof through removal refusals

hasOwnershipEvidence treated any clientRegistrationRemoval refusal as no ownership: an effective REA-owned rea member shadowed by an earlier foreign duplicate (shadowed_unowned_member), or an owned native row beside a foreign V1 fallback (foreign_legacy_fallback), discarded the already-parsed positive row fact. With FreeBuff unverified and close failures recurring on the preflight/removal rereads, those failures were then downgraded to retained, so runUninstall(true) removed the skill and purged REA data while the active owned row remained. The refusal now carries the owned rows that motivated it — the refusal only refuses the edit — and hasOwnershipEvidence evaluates that fact on both paths; preflight and removal keep refusing the unsafe edit exactly as before.

Covers the Codex P2 on Uninstall.ts:269. Validation: the new regression fails on 225cb214a (freebuff reports no blocking failure while the poisoned-scope error lands on claude_code) and passes after; setupClientConfigCleanupOwnership 26/26; the 21 Uninstall-consumer suites are byte-identical to the recorded 225cb214a baseline (61 pre-existing Windows-host failures: symlink EPERM, stale-vs-aligned); tsc --noEmit, oxlint (0 errors, same 6 warnings) and oxfmt --check clean.

🤖 Generated with Codebuff
Co-Authored-By: Codebuff <noreply@codebuff.com>

* fix(uninstall): keep unresolved discovery probes from softening shared failures

The discovery probe swallowed every stat failure, so a FreeBuff profile denied with EACCES/EIO was indistinguishable from an absent profile: shared storage was marked applicability-unverified and, when ~/.agents/mcp.json also remained unreadable, the ownership and removal reads softened to retained. runUninstall(true) then removed the skill and purged REA data while an installed FreeBuff could still hold an active registration — the regression even reports complete. Absence (ENOENT) is now the only state that leaves shared paths unverified; any other probe failure leaves applicability unresolved, and shared-config failures stay blocking.

Covers the Codex P2 on Uninstall.ts:318. Validation: the new regression fails on 7572a7082 with status complete and purged data and passes after; freebuffClientConfiguration 13/13; the Uninstall-consumer batches are byte-identical to the recorded baselines (61 pre-existing Windows-host failures: symlink EPERM, stale-vs-aligned); tsc --noEmit, oxlint (0 errors, same warning rules) and oxfmt --check clean.

🤖 Generated with Codebuff
Co-Authored-By: Codebuff <noreply@codebuff.com>

* fix(uninstall): retain completed configuration reads as removal evidence

A close failure after a completed read discarded the text that read
produced, so an owned registration row the text proves softened to
retained. The completed text now drives removal, keeping shared-config
failures blocking when ownership evidence exists.

Co-Authored-By: Anthropic <noreply@anthropic.com>

* fix(uninstall): stop removal when a cleanup retry leaves a handle unreleased

A completed reread whose handle the cleanup retry cannot release now fails
blockingly instead of serving the text: with no owned row, the soft path
let removeAll purge managed data before close() reported the incomplete
cleanup. The completed text is served only after the retry releases the
handle; an unreleased handle is REA's own failure, never applicability
uncertainty, so it bypasses the retained softening.

Co-Authored-By: Anthropic <noreply@anthropic.com>

* fix(uninstall): keep the ZCode fallback when its profile probe is unresolved

A denied or failed profile probe leaves ZCode's applicability unresolved,
never absent, but the fallback branch dropped the shared row on
applicability alone: with the native config and FreeBuff's profile both
absent, an installed ZCode kept its uninspected registration while
uninstall purged skill and data. Unresolved probes now keep the fallback
in scope with the same fail-closed treatment as other unresolved shared
paths; definitive absence still keeps ZCode out of another product's
primary storage.

Co-Authored-By: Anthropic <noreply@anthropic.com>

* fix(setup): preserve a shared row's enable:false during FreeBuff repair

The shared agents file doubles as ZCode's fallback, so its `enable: false`
binds every reader: doctor now reports the disabled row as stale for
FreeBuff, but following that remediation rebuilt the generic JSON entry
without the flag and silently re-enabled a registration ZCode disabled.
Repairs of shared storage now carry the activation fact forward, while a
client's own native storage keeps its established single-reader repair
contract; the denied-profile uninstall regression also pins the
fallback's new fail-closed inspection beside the denied read.

Co-Authored-By: Anthropic <noreply@anthropic.com>

* test(uninstall): retarget the completed-reread regression to a released retry

The concurrent-writer regression held the reread handle open forever,
which the fail-closed path now serves: it duplicated the unreleased-handle
regression while documenting the opposite contract. The fixture's close
spy gains a failure limit so the cleanup retry releases the handle, and
the test again proves the completed text drives removal of the
concurrently added owned row, with purge verified against the cache
layout purge actually removes.

Co-Authored-By: Anthropic <noreply@anthropic.com>

* fix(doctor): report a preserved shared disable as a manual conflict

Preserving a shared row's enable:false left doctor recommending a setup
run that registrationCurrent correctly treats as already current, so the
scoped doctor returned needs_human forever. The shared-enable
interpretation now has one owner, sharedEnableFlagBinds, used by both
the activation rule and the remediation: a row disabled through the
shared flag reports the manual conflict and states that rea setup will
not change it, instead of an endlessly ineffective repair.

Co-Authored-By: Anthropic <noreply@anthropic.com>

* fix(doctor): keep a native ZCode disable on the setup repair path

The manual-conflict remediation matched a native zcode row through
sharedEnableFlagBinds, but setup drops enable:false on single-reader
storage, so a native disabled registration was told setup would not
change it. The remediation now reads setup's own writer rule,
exported as setupPreservesDisabledActivation: shared storage and the
zcode fallback view keep the manual-conflict message, while a native
row keeps the working rea setup instruction. Regressions pin both
remediations.

🤖 Generated with Codebuff
Co-Authored-By: Codebuff <noreply@codebuff.com>

* revert: drop the unrelated managed-CIL describe split

The split does not belong to FreeBuff client support and only widens this
PR's diff.

🤖 Generated with Codebuff
Co-Authored-By: Codebuff <noreply@codebuff.com>

* fix(uninstall): remove the shared agent registration once for both clients

ZCode's ~/.agents/mcp.json fallback and FreeBuff's own configuration queued the
same physical file twice, so ZCode removed the row and FreeBuff then reported
it absent, losing the outcome for the client that owns the file.

Resolve every configuration path to one owner -- the client whose
configuration it is -- and project that single inspection and removal to each
client that loads it. A fallback reader still contributes its discovery probe,
so an installed or unresolved reader keeps the shared file fail-closed.

Discovery also accepted a dangling ~/.config/freebuff-desktop link, which setup
and doctor reject because they follow the target, so an unrelated malformed
shared file blocked every other removal. Resolve the link before treating the
profile as installation evidence, keeping lstat for removal safety.

Also date the FreeBuff release wording against the published 6.7.0 package.

* fix(uninstall): keep a row per client when two clients own one file

OPENCODE_CONFIG can point OpenCode at FreeBuff's configuration file, where
OpenCode writes `mcp.rea` and FreeBuff writes `mcpServers.rea`. Grouping by
filename gave that path a single owner, so uninstall removed only OpenCode's
row, reported that removal for FreeBuff, and could purge managed data with
FreeBuff's registration still active.

Share the decision only through a fallback view of another client's row: every
client that declares the path as its own configuration keeps its own
inspection and removal, and the fallback reader reports each of them.

* fix(clients): preserve discovery and fallback registration identity

Follow product discovery link targets without losing configuration entry
presence or explicitly selected inspections. Associate fallback readers with
the format owner's registration table and project outcomes by owner and path,
so OpenCode removal cannot be reported as a ZCode fallback removal.

All three new boundary regressions fail against the previous source and pass
with the fixes. Validation: check:fast; 217 focused tests passed; the two
changed test files were rerun with 50 passing tests. No installed FreeBuff
client was launched.

---------

Co-authored-by: morluto <76467478+morluto@users.noreply.github.com>
Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
Co-authored-by: Kaoru0822 <208281322+kaoru0822-kitauji@users.noreply.github.com>
Co-authored-by: Codebuff <noreply@codebuff.com>
2026-10-25 11:29:17 +08:00
Wenyu Chiou 238914974d fix(analysis-view): preserve current observation paths in summaries (#7039) 2026-10-25 06:35:12 +08:00
morluto 58fb824105 refactor(evidence): centralize JSON payload admission
Give ordinary Evidence creation an explicit unknown-payload input contract
while retaining the strong JSON contract for producer helpers and cooperative
immutable creation. Keep schema admission, input snapshotting and identity
hashing with the Evidence owner.

Remove 32 generic JSON preparses that only fed ordinary Evidence construction.
Preserve semantic format validation, selected-source bindings, standalone
JSON boundaries, typed executions and scenario digest contracts. Invalid JSON
now reports its Evidence parameters/normalized_result/raw_result prefix.

Validation: fresh runtime/catalog build, 560 focused and README tests passed,
4 platform-specific cases skipped, full static/docs checks, test discovery,
duplication and diff checks. New regressions cover omitted semantic optionals,
raw-result defaults and nested undefined refusal without input mutation.
Installed providers, real browsers/Frida/JADX and Linux-only recovery remain
unverified; boundary providers are authored fixtures.
2026-10-25 05:01:36 +08:00
morluto 731109b7d7 refactor(analysis-view): consolidate result and budget ownership
Reuse the shared immutable-result reader for Interface Builder while checking its current parent binding on every read. Accept truthful optional schema outputs and validate normalized JSON before freezing or caching it, preserving explicit undefined facts without caching them.

Move accumulator construction and inline admission policy into the domain. One prepared projection retains the same budget across admission and projection while preserving standalone defaults, custom budgets, and authentication order.
2026-10-24 23:11:02 +08:00
02e049744f feat(environment): build agent environments from a prompt (#6946)
* feat(environment): report what an environment serves with an environment-coverage view

A new inspect_analysis_view kind over capture Evidence. It projects the
state an environment derives with the given template rules and reports
each tool as answered from state, replayed with its view reason, a served
write, or a withheld write with its reason, the records behind it and a
hint about what to record next. The hints cover every write reason, so a
new reason without one fails to compile.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* feat(environment): build an environment bundle in one command

rea environment-build <capture> [directory] inspects a HAR (or reads
capture Evidence), projects the environment manifest from the in-memory
Evidence, authenticates the pair, prepares the state and writes the bundle
environment-export writes. Every bundle file is byte-identical to the
three-step path for the same capture and options.

The report adds the capture and manifest identities, the coverage summary,
warnings (a loopback capture named after its file, credential-named body
members by pointer) and the next command. --dry-run writes nothing. The
default template rules are the four the published environments use.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(environment): cover environment-build and the coverage view

Domain tests check the hint table against the state view's reasons, the
summary, and the view against the environment-state view it summarizes.
Service tests build the fixture capture and compare every file with the
three-step path, a dry run, loopback naming and the refusals. A CLI test
compares a HAR built in one step with the three CLI steps byte for byte,
and an MCP test projects the view from every source kind.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(environment): build the real-agentenv lane's bundle with environment-build

The lane now runs the command users run: it builds the Grafana-shaped HAR
with environment-build and the packed checkout, checks the report, then
runs the bundle with agent-env as before.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(environment): document environment-build and the coverage view

The agent environments guide opens with the one-step build: the report,
the hint for each withheld write reason, and what a bundle ships. The CLI
guide, the capture guide and the skill reference name the command and the
environment-coverage view.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(environment): harden environment-build after review

- The credential scan walks with its own stack, so a deeply nested body
  cannot crash the build, and it also reports credential-named header
  names, query names, form body members and string arrays.
- The build checks SIGINT between stages: cancelled before the bundle
  stage it writes nothing, during the write it names the written bundle.
- A dry run opens the package tarball, so it refuses what a build refuses.
- Repeated template rules are refused, a HAR saved as .json gets a hint,
  file-derived names follow the bundle name rules, `localhost.` counts as
  a loopback origin, and the next command is shell-quoted.
- --capture-timeout-ms passes through to the HAR inspection, and a
  missing directory is refused before inspection.
- The no-observation hint covers updates and deletes of entities the state
  never held; the coverage view states that it does not apply the
  serve-time admission checks; the inspect_analysis_view description
  names the view.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(environment): state the build's conditions and record its verification

The guides now state when the one-step bundle equals the three-step one,
which headers inspection excludes, what the credential warning scans, how
cancellation behaves, and that the coverage view does not apply the
serve-time admission checks. The spec folder records the census, the end
to end runs, the gates and the review.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(environment): dispatch a pending interrupt before each build stage check

The manifest, state and coverage stages run synchronously, so a SIGINT
that arrived during them was only dispatched once the bundle write had
begun. Each check now yields first, so an interrupt before the bundle
stage cancels the build with nothing written.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* feat(browser): send declared requests from a scenario page with a request step

A capture_browser_scenario step `request` sends one declared HTTP request
through the page's own fetch, with its cookies and session, the way the
application's frontend would, and reads the whole response so the capture
records the transaction like any other. The path must resolve to the start
URL's origin, and the page must be on that origin when the step runs.
Query values and header values may be literals or declared secrets, and a
header may read its value from a cookie or a local storage entry, which is
then redacted from later records like a declared secret. `expected_status`
fails the step on any other status. Scenarios without a request step are
unchanged.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(browser): verify request steps in a real browser through to a built environment

verify:browser:request records a write session against a fixture item API
that refuses writes without its CSRF cookie header and stored bearer
token. It checks that every request lands in its own step, that the page
values authenticated each write and appear in no record, header or body,
that an unexpected status fails the step and cancels the rest, and that
environment-build serves the recorded create, update and delete.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* feat(environment): export environment bundles over MCP

export_environment_bundle writes the bundle environment-build writes, from
capture Evidence retained in the session or one capture Evidence file,
into an absolute output directory that must not exist and whose parent
must exist, as extract_firmware and export_web_scripts require; it never
creates the parent or reuses a directory. It returns the same report,
whose schema now lives in the domain so the CLI and the tool share it, and
dry_run reports without writing. A loopback capture without a file needs a
name. The build's refusal messages no longer name CLI flags.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(environment): scan scenario credentials, own the dry-run tarball and serialize Evidence once

A browser scenario's retained header values and the query parameters of its recorded URLs are scanned for credential
names as a HAR's are, through a review projection of its records. A dry run admits and releases the package tarball
through the export's regular-file scope, so a close it cannot confirm keeps its owner, and checks for cancellation
after that last await. Evidence is written into one exactly sized buffer instead of chunks joined by a copy.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(environment): record the review round's checks

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(skill): build agent environments from a prompt with request steps and the bundle tool

Add the environments reference to the skill and install it with setup: record
against a disposable instance, sign in through the UI, write with request
steps and read each write back, check coverage, re-record by withheld reason
and export the bundle. Route it from SKILL.md, name agent environments in the
skill description, and document the request step, the export tool and
recording writes.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* refactor(browser): split the request lane and header resolution into smaller functions

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* style(environment): format the build spec

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(environment): say when an untimed capture learns no write clock

Coverage of a capture whose records are not all timed, which includes every
browser scenario capture, now states that the state learns no clock, so an
update stamped with a server-set modification time stays unexplained-change
however often it is recorded.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(skill): give agents a whole scenario shape with step timeouts

Agents guessed the scenario schema field by field and two hung on steps
without timeout_ms. The reference now starts from a complete scenario with a
timeout on every step, and says a scenario capture cannot serve updates the
application stamps with a modification time.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(browser): keep request steps on their origin and their page values redacted

- Follow no redirects: a redirect fails the step and nothing reaches the
  location it names (checked in real Chrome), and check the page's origin
  again in the page as the request is sent.
- Send nothing once the step's time has run out or it was cancelled while
  header values were read; the in-page deadline is what remains of the step's.
- Keep every page value redacted under a repeated or colliding label, keep a
  value's first marker when it is read again, and leave values shorter than
  8 characters unredacted rather than rewriting ids, ports and hosts.
- Refuse a header name given twice, User-Agent (Chrome drops it) and line
  breaks in literal values and prefixes; fail before sending when a secret or
  page value holds them.
- Append query entries after the path's literal query without re-encoding it.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(environment): document request step limits and word bundle refusals for both surfaces

Document redirects, timeouts, page value redaction, HttpOnly cookie sources
and header refusals for request steps. Refusals shared by environment-build
and export_environment_bundle no longer name CLI flags, and the retained
loopback refusal no longer prints an empty file name. The skill reference
asks for read-backs after each write, shows the coverage view's source, names
package_tarball for unreleased builds and the browser path a scenario ships.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(environment): scan every form occurrence and MIME-less scenario bodies

The build's credential scan collapsed form bodies with Object.fromEntries, so a
repeated field kept only its last occurrence: `api_key=secret&api_key=` warned
about nothing although the Evidence ships the value, and repeated values were
undercounted. Form fields are now scanned as ordered name/value pairs, as
headers and query strings already are.

The review projection of a capture_browser_scenario dropped a request body
recorded without a media type, so the scan never saw it. Review keeps such a
body's text with an empty media type; the manifest projection still reads only
bodies it can classify.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(browser): close request step edge cases from the second review

- Append query entries correctly after a path ending in "?", "&" or "#".
- Refuse 3xx expected statuses, which an unfollowed redirect can never
  report, and say a redirected write may already have been applied.
- Redact a page value also as fetch sends it, without surrounding spaces
  and tabs.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(environment): document page value body costs, redirects and MCP dry runs

Document that reading a page value shrinks the bodies a capture keeps under
the default allocation limit, that redirected writes may have landed, that
the MCP dry_run still checks its output directory and which refusals name
the tool, and keep the .har hint in the HAR-as-JSON refusal for both
surfaces.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(environment): record the prompt-to-environment verification

Gates, the real-browser lanes, five environments built from prompts by an
agent on disposable VMs and evaluated with two models, and the two reviews.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(skill): count rollback failures from the managed skill files

The environments reference made the skill eight files, so the recovery tests now derive the counts they expect from
MANAGED_SKILL_FILES instead of fixing them at six and seven.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(adb): restore the portable Java float pattern a merge rewrote

A lint autofix during a merge unescaped the hyphens in javaFloatValuePattern, which is invalid in a v-mode character
class, so the advertised start_adb_activity schema failed to compile in every JS regex mode. The file now matches main.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(browser): show the request step inside a whole scenario

Every JSON example in the browser scenario guide is a capture_browser_scenario input the catalog test parses, so the
request step example now sits in a launch scenario instead of standing alone.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(environment): scan structured HAR form params and the request side of unattributed scenario transactions

A HAR request recorded with postData.params and no text is scanned by those parameters, each occurrence counting, and
the review projection keeps the request side of a scenario transaction whose response cannot be attributed, so the
credential warning covers what evidence.json ships in both cases.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(environment): validate build paths and read dry-run tarballs

* fix(environment): report bodies too large for the credential scan

Text bodies over the scan's 4 MiB limit, including a response decoded only as a prefix, are reported as a
credential-scan-incomplete warning by record and side, never by content, so an absent credential-named-members
warning no longer reads as a complete check. The spec and agent-environments guide also state the path validation and
dry-run tarball read that e52ae1cd added.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(verification): release cold source transform services

* fix(javascript): retain capture context along covered mutation paths

* fix(environment): guard request dispatch and report export limits

* fix(environment): admit serialized exports and scan HAR form fallbacks

* fix(environment): admit in-memory build inputs against heap headroom and scan SaveHar null-text forms

The inspected HAR's Evidence and the projected manifest are checked against live heap headroom before they are
serialized, with the same check the file route uses, so a capture too large to parse and seal is refused as
resource_constraint before anything is written. A request whose postData text is SaveHar's null is scanned by its
structured params.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(environment): measure the credential scan limit in UTF-8 bytes

A body counts against the 4 MiB limit by its UTF-8 length, not its UTF-16 code units, so multibyte text over the
limit is reported as unscanned instead of parsed.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(browser): send request steps only before their deadline and keep page reads on the start origin

The page receives the step's absolute deadline and a one-second start window, so a busy page that runs the request
late, or after the step is cancelled, sends nothing; local storage is read only on the start origin; the response is
drained without keeping its body; an unparseable path is a field issue; retained Evidence is refused for heap headroom
before it is serialized; and the skill says how to reach server-assigned ids.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* style: format integrated export admission

* fix(javascript): erase inline type imports before binding values

* fix(browser): run the request lane under the shared verifier command owner

The browser request lane runs each CLI call through createPackageVerifierCommands on a private runtime root, so a
timeout, output overflow or failure stops the CLI and the browser it launched before the root is removed, and a failed
stop is reported with the root retained. The verification record states the lane's current counts.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(environment): scan scenario content by event and read bodies by their media type

A browser scenario's credential scan reads every retained network-content event, including a response attached
mid-flight and a transaction no record represents, with event pointers, and each transaction URL's query once; the
review record projection it replaces is removed. A body is parsed as a form or as JSON by its recorded media type,
falling back to its shape, so valid forms such as `password=x&` are scanned and sentences are not read as forms.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
Co-authored-by: Kaoru0822 <208281322+kaoru0822-kitauji@users.noreply.github.com>
Co-authored-by: morluto <76467478+morluto@users.noreply.github.com>
2026-10-24 21:51:41 +08:00
1a48a82020 feat(analysis)!: default function MCP output to retained summaries (#5660)
* feat(ghidra): bound one procedure's decompile without closing the session

Fixes #5340

* fix(ghidra): report decompile limit as a request timeout

Keeps BinarySession from marking every Ghidra operation unavailable after one procedure's decompile reaches the limit, and names the MCP tool-call deadline in the remediation.

* fix(ghidra): budget the decompile limit and report cancellation-closed sessions

Adds REA_GHIDRA_DECOMPILE_TIMEOUT_SECONDS to the derived Codex/Kimi tool deadline and forwards it through setup. Marks a remote failure that settles after caller cancellation so the timeout projection no longer promises session reuse.

* feat(ghidra)!: default analyze_function to a retained summary

analyze_function was the one analysis tool never wired into REA's
detail: summary|complete convention, so it always returned the complete
native dossier inline (0.2-10 MB, dominated by value-flow and
references). Agents on tool-result-capped harnesses never reached the
pseudocode.

Add `detail` to analyze_function, defaulting to summary: return a
compact dossier (procedure identity, pseudocode size, facet counts,
value-flow availability) and retain the complete dossier Evidence in
the session. Page pseudocode, references, assembly and value-flow
through normalized_result.parent_evidence_id with inspect_analysis_view,
which already projects every native facet. detail: complete returns the
full dossier inline as before. Delivery detail never reaches the
provider or Evidence identity.

BREAKING CHANGE: analyze_function now defaults to the compact summary
view instead of the complete dossier inline. Pass detail: "complete"
for the previous behavior.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb

* feat(cli): expose analyze_function detail on the function command

Wire `rea function` into the shared CLI detail-delivery convention
(--detail, --evidence_output) so the CLI and MCP adapters offer the same
summary | complete choice for analyze_function. Summary delivery writes
the complete dossier Evidence to a bundle and returns the compact
summary view; it fails before analysis when --evidence_output is
missing, so no provider work is wasted. The CLI default stays complete
because a one-shot command has no in-process Evidence retention.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb

* refactor(ghidra): harden analyze_function summary after independent review

FlatlineRoundtable cross-model review (6 lanes) converged on the summary
projection's availability semantics being underspecified. Document that
facet_availability is authoritative over raw pseudocode length, that
code_units are UTF-16 (the unit inspect_analysis_view pages by), and that
value_flow.truncated is meaningful only when value-flow is available.
Parenthesize the nullish-coalescing/comparison for clarity. No behavior
change; declined claims (value-flow "truncated collapse", unresolved_calls
dead code) were schema-impossible or already correct.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb

* test(ghidra): cover analyze_function detail wiring on both adapters

Close the roundtable's top convergent finding: the summary path had only
domain-projection coverage, not the server/CLI wiring where the breaking
behavior lives.

MCP server (registerEnhancedTools): the default delivers a retained
summary whose complete parent is recorded for paging; delivery detail is
stripped before the provider request; detail: complete returns the full
dossier inline; a registration without retention rejects a summary
request before any provider work.

CLI (rea function): the default returns the complete dossier; --detail
summary without --evidence_output fails before analysis; with the bundle
sink it returns the compact summary and writes the complete Evidence
bundle.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb

* fix(ghidra): keep analyze_function delivery detail out of provider inputs

Address the five automated review findings on #5660.

P1: `detail` lived in the shared enhancedInputSchemas.analyze_function, so
inspect_native_api composed `{procedure, detail: "summary"}` and the strict
Ghidra analyze_function schema rejected it. Delivery detail is now owned by
the analyze_function MCP tool contract; the handler separates it before any
provider call, and executeFunctionAnalysisEvidence parses the provider input
only. The MCP regression test validates provider input exactly as the
production Ghidra client does and exercises inspect_native_api.

P2: the analyze_function summary Evidence now carries the parent's
relationship_coverage like native facet views, so partial or unknown
caller/callee discovery is not reported as complete.

P2: the summary reports the dossier's declared facet_availability, nulls the
counts of facets the provider declared unavailable, and lists each reason in
unknowns, so Kuna's empty references, comments and basic blocks are not
mistaken for observed absence.

P2: inspect-analysis-view evidence-file sources accept the Evidence bundle
that --evidence_output writes, selecting a record with source.evidence_id
when the bundle holds several; the CLI test reads the saved bundle back
through that route.

Tests that assert the complete dossier over public analyze_function now pass
detail complete, and the oversized-dossier test asserts the summary view it
previously expected to be unsupported.

Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb

* fix(ghidra): keep omitted function facets unknown in the summary

The analyze_function summary coerced an omitted unresolved_calls record to
a count of 0 while the native facet view reports the same dossier as "not
recorded", and it carried no counts at all for the pageable
swift_string_literals facets. Count optional records as null when the
dossier omits them, name them in unknowns, and add nullable counts for both
Swift literal facets. The summary Evidence envelope also dropped the
function address: createAnalysisViewEvidence now derives one function-view
predicate for both the address location and relationship coverage.

Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb

* fix(scripts): request complete analyze_function dossiers in real-provider checks

The real-provider check scripts call analyze_function over MCP and then
consume the complete dossier: requireFunctionDossier, functionDossierSchema,
.procedure/.pseudocode reads, operation assertions, compare_functions inputs
and the oversized-dossier rejection path. The summary default broke them.
Every such call site now passes detail: "complete". Provider-direct callers
are unchanged because detail is an MCP contract field; the admission-error
sites stay unchanged because provider failures return before the summary
branch.

Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb

* fix(ghidra): keep unavailable value-flow counts unknown in the summary

summarizeDossier coerced the five value_flow_* counts to zero when
native_value_flow was null (IDA, Kuna) or declared unavailable (Ghidra),
so the summary reported empty collections while value_flow.available said
otherwise. The counts are now null unless value flow is available, with the
reason already named in unknowns.

Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb

* fix(evidence): budget authentication headroom by file shape and serialized size

The evidence-file headroom reserved two parsed copies, calibrated for one
record, and charged strings at two bytes per character. Bundle
authentication additionally holds the schema-parsed bundle, the re-parsed
records and two JSON.stringify results, which expand control characters and
lone surrogates sixfold: a bundle whose raw_result is a million NUL
characters estimated at 2 MB parsed but needed 12 MB of serialized text.

The budget now has a parsed term and a serialized term per file shape, owned
by EvidenceAuthenticationHeadroom and shared by the analysis-view reader and
the bundle importer, which had no guard. Two transient peaks the budget did
not name are removed at their producers: the canonical digest hashes a large
leaf directly instead of concatenating it into its buffer, and the JSON
validator walks containers by cursor so a wide array no longer queues one
entry per member.

Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb

* fix(mcp): route analyze_function summary replies to dossier consumers in docs and prompts

The MCP guide, the version-comparison and crash-triage prompt contracts,
the authored skill and the Kuna, IDA and function-matching docs still told
agents to pass analyze_function replies straight to compare_functions or
build_call_path. Under the summary default those consumers reject the reply.
They now name the retained-evidence reference for compare_functions, the
observations fields of match_native_functions, and detail: "complete" for
build_call_path, which accepts only inline dossiers.

Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb

* test(evidence): pin validator member order and keep interrupted validation yielding

Independent review of the cursor validator found the interrupted-validation
fixture relied on the old last-first walk: its over-deep head was reached
before the first cooperative yield. The padding now precedes the deep
element so the walk yields first, which is the invariant the test guards.
A new case pins first-defect-in-member-order reporting, skipped
non-enumerable keys no longer count toward the yield cadence, and the
import-headroom test loads the reader through a fresh module graph so it
holds under the services project's shared workers.

Co-Authored-By: Claude Fable 5.1 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01AoJZDPcrgmMsCqLG4LfiFb

* fix(ghidra): align deadline bounds and cancellation outcomes

* refactor(ghidra): shorten deadline recovery guidance

* fix(mcp): clarify the scope of inferred decompile deadlines

* test(ghidra): verify deadline workflows and document measured costs

Separate failure and registration cases by their distinct contracts.
Record actual Linux Ghidra, CLI and MCP evidence with measured context,
elapsed time, CPU and memory, and explicit remaining coverage limits.

* docs(ghidra): pin integration and distinguish baseline format failures

* fix(ghidra): own failure lifecycle wording in the provider

* test(ghidra): budget timeout fixture generation before allocation

* fix(analysis): preserve summary provenance and bound bundle guidance

* fix(ghidra): align capability and traversal deadline guidance

* style(config): align deadline guidance formatting

* docs(ghidra): record capability and traversal verification

* docs(analysis): use absolute paths for Evidence files

* docs(analysis): record completed function summary measurements

* docs(analysis): update main integration validation

---------

Co-authored-by: Syed Rishad <rishadzzzz@gmail.com>
Co-authored-by: Claude Opus 4.8 <noreply@anthropic.com>
Co-authored-by: gensokyo-dev <342580529+gensokyo-dev@users.noreply.github.com>
2026-10-24 08:18:53 +08:00
morluto b33f68deb7 refactor(providers): separate identities from workflow profiles 2026-10-23 23:14:14 +08:00
morluto b6a0f32b14 fix(evidence): centralize authentication failure ownership 2026-10-23 13:48:11 +08:00
morluto b7f8bbb49f refactor(analysis-view): unify request and source ownership 2026-10-23 07:57:14 +08:00
Jay-Alexander Elliot 57fd3ea5d8 feat(cli): summarize managed members with durable Evidence paging (#5167)
Fixes #5148.

Add opt-in durable managed member summaries and authenticated paging while preserving complete default output, original Evidence, cleanup ownership and queued cancellation.

Verified with bounded real Newtonsoft/Redux/Rust tasks, independent oracles, 556 focused tests and the expanded domain gate; paired token estimates and latency tradeoffs are recorded in experiments/analysis-efficiency/managed-cli.md.
2026-10-22 00:43:30 +00:00
Alex GorevskiandCopilot 4e28166626 fix(cancellation): preserve caller abort reason in cancellation errors (#6144)
* fix(cancellation): preserve caller abort reason in cancellation errors

Several application, provider, and MCP boundaries constructed
AnalysisCancelledError, ArtifactReaderFailure, or
DetachedPgpSignatureError for an already-observed or newly-observed abort
without passing the caller's signal.reason as the error cause. The typed
result then reported cancellation with an undefined reason even though the
exact object supplied to AbortController.abort(reason) was still available.

Pass signal.reason as the cause at each producing cancellation site:
JavaScript artifact reconstruction and file abort checks, derived MCP
operation checkpoints, detached PGP verification, ASAR listing admission,
Dart AOT inspection and its provider guard, evidence-file analysis views,
binary layout and recorded crash admission, WASM inspection admission,
and the Kuna shared assembly-index wait.

Cancellation classification and cleanup behavior are unchanged.

Fixes morluto/rea#5935
Fixes morluto/rea#5944
Fixes morluto/rea#6100
Fixes morluto/rea#6101
Fixes morluto/rea#6110
Fixes morluto/rea#6113
Fixes morluto/rea#6121
Fixes morluto/rea#6131
Fixes morluto/rea#6132

* test(cancellation): assert the exact caller reason identity

Copied reasons satisfied toMatchObject, so the tests would pass even if the
caller's abort reason were replaced by a structurally equal copy. Capture the
rejection and assert the cause is the same object.

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Copilot-Session: 35b247e9-c793-4b8f-979a-807c27112cf5

---------

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Copilot-Session: 35b247e9-c793-4b8f-979a-807c27112cf5
2026-10-22 04:11:15 +08:00