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c363f3e27b |
feat(desktop): pick seed and end by checkpoint, and keep the capture host out of bundles (#9037)
* feat(desktop): capture a Linux desktop application in use Add `capture-desktop-application`, a CLI-only, Linux and X11 capture that launches an installed desktop application, watches it while it is used and writes capture Evidence plus SHA-256 addressed content: - inventory: desktop entry, launch command, executable, package and its apt sources (or snap, flatpak, AppImage), Electron markers and candidate state directories; - session: the launched process tree, client windows from xprop with the first application window time and a window match, and files held open; - state: a stat walk of the home directory before launch, at checkpoints read from stdin, at stop and after exit, with created, modified, deleted and retyped paths and the content of changed files and state directories. It refuses non-Linux hosts, missing DISPLAY or xprop, a non-empty output folder and an application whose window is already open, and signals only processes it started. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): own launched processes, confirm walk coverage and keep cancelled captures - Launch through the owned provider path with a run token; release with SIGTERM, then the token-verified group cleanup, after every session. Processes without the token are never signalled; each records whether it carries it, and the session records whether cleanup was verified. - Report creations and deletions only where a walk listed the nearest existing directory; count the rest as unconfirmed. - Retain a file only when it is still the walked version, through owned no-follow reads; charge the budget only for new content; create files exclusively in a private output folder owned by the caller. - Walk content roots outside the home directory, compare paths in their physical spelling, and run executables from the caller's directory. - Refuse when the window list cannot be read, re-evaluate window ownership each sample, handle one queued request per sample with a bounded stdin queue, and write the capture with end reason `cancelled` on interruption. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep owned cleanup failures and fresh digests - Allow a capture cancelled before any requested checkpoint to hold only the baseline. - Retry an incomplete stop once; if cleanup is still unverified, write the capture and fail with the run token and process group as cleanup resources. - Classify path changes after a walk (ENOTDIR and other selected-file errors) as changed_since_walk instead of failing the capture. - Treat a non-directory ancestor as proof that nothing existed beneath it. - Report a before digest only for the file version it was read from. - Derive stderr_truncated from stderr's own byte counts. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * wip(desktop): state view over a capture folder Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep failed file-handle closes owned for retry Content reads pass retainFailedClose, so a handle whose close fails stays owned by the content store; the capture retries those closes after it is written and fails with the output folder as the cleanup resource if one still cannot be closed. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): read a captured application's state Add inspect-desktop-application-state, a CLI command that reads a capture folder into the application's state: every retained or changed file with its role and reasons, a typed JSON view of each version (SQLite through the shared worker, dconf through a private dconf dump, JSON, XML, key files, text) and the kinds of change between versions (lines, values, keys, rows). Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): report process and handle cleanup failures together When both the launched processes and a retained file's handle remain unresolved after the capture is written, one cleanup error now lists both reasons and both resource sets. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): export a captured application as an agentenv computer app Add export-desktop-application, which writes an agentenv bundle with one computer_app environment from a capture folder and its state view: the apt package, a boot launch matched on the captured window class with a window ready check, owned paths from the state roles, a seed of the baseline files, data hooks that call agentenv's add/get/reset helpers with a typed JSON view on get, a skill, a README and a deploy smoke task. The desktop CLI commands now load their services lazily. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep state views faithful to the capture - Read key files, XML attributes, dconf groups and SQLite tables into dictionaries without inherited properties, so captured keys such as __proto__ stay data. - Version databases with their write-ahead log as of each checkpoint, and stage only digest-verified bytes for the SQLite and dconf readers. - Detect the format per version, report format changes, keep JSON null and empty containers as values, keep XML text and preserved whitespace, and mark truncated views (including XML depth) and comparisons of them. - Number versions and changes by checkpoint index, decide baseline presence from the captured type, and keep tagged SQLite integers, text bytes and blobs distinct. - Carry the capture's limitations and omitted content forward, match state directories by their home path, index changes once per capture, keep failed handle closes owned, and finish the CLI through the shared owner. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep coverage, logs and handles honest in the state view - Read coverage flags only from formats whose readers write them, so JSON fields named truncated stay data. - Fail a SQLite version whose write-ahead log existed but was not retained or does not match its digest, instead of reading the database alone. - Close retained content on every exit, including cancellation, and report a close that still fails together with the primary failure. - Finish the CLI with the canonical operation name. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): export only what the computer can install and seed - Refuse packages not from the Ubuntu 24.04 archive, since the computer installs by name from that archive. - Start the launch command in the captured working directory. - Respell the home path only in files the state view read as text. - Report files that were not retained instead of dropping them silently. - Load captured dconf keys for apps that own no files. - Keep home-level files as owned paths; rename reserved Python class names. - Mark truncated SQLite and text views in the class's get view, and read file types the way the state view does. - Release the output tree through a resource scope, and read seeds through an owner closed on every exit. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep staged folders owned, symlinked state roots and XML values - Stage database bytes in a private runtime root released through a resource scope, so a failed removal keeps its owner and is reported with the read's outcome. - Report cleanup facts and owners from desktop failures instead of wrapping them as a plain adapter error. - Record the state directories as walked, in their physical spelling, and match roles against both spellings, so files in a symlinked state directory are not mistaken for selected documents. - Keep whitespace-only XML leaf values; drop only formatting between elements. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): read XML in the exported app the way the state view does Keep whitespace-only leaf values and xml:space="preserve" text in the generated get view; drop only formatting between elements. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): release retained handles with their owners, read older captures - Release retained-content handles whose close failed through a resource scope on every exit; a release that fails again reports the exact handle owners. A read that finished keeps its bytes when only its close failed. - Accept captures written before state directories were recorded, and say in the state view's limitations that symlinked state directories may be misclassed for them. - Compute each XML element's whitespace context once instead of scanning siblings for every text run. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): boot without the working folder, bound XML, accept mirrors - Try the captured working directory only when an argument is relative, and start the app even when that folder is missing. - Cut the generated XML view at REA's node and depth limits, and keep one unreadable file from failing data/get. - Accept Ubuntu 24.04 mirrors, not only the canonical hosts; PPAs and other repositories are still refused. - Read seeds through the retained-content owner's new signature. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): state view review round - Stage a retained -journal beside its database so the SQLite worker accepts an inactive journal and refuses a hot one; a -wal or -journal that existed but was not retained (including one omitted at the baseline) makes the version unreadable. - Keep tables that read when another fails, and let cancellation and unfinished cleanup propagate instead of becoming view errors. - Read text as a key file only when every line parses as one. - Rank a file named in a window title or selected by the caller as a document even when the application holds it open; match titles on file-name boundaries; leave the display name out of dconf matching. - Bound JSON and key file views (4 MiB, 500 levels, exact numbers) and report too-large, missing and altered retained content separately. - Add no version or change while a database stays absent. - Read staged databases in place instead of copying them again. - Give Evidence the same limitations as the result. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): export review round - Load captured dconf keys without D-Bus: install dconf-cli, compile the existing and captured key files into the user database, and warn on failure instead of stopping the server. - Start relative-argument launches in the captured working directory, the home included, since the framework launches from the app folder; respell the home itself and option values under it. - Read views in a thread, skip files over 64 MiB, align the generated readers with the state view's, and close SQLite connections. - Never own the home or a shared base folder; map a symlinked state directory's files back to their home spelling. - Report omitted files and unretained opened folders. - Name the module so it cannot shadow another, and keep the class off the module's own names; derive names the bundle check accepts. - Write seeds as they are read, and remove an unpublished bundle on failure. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): capture review round - Ask the launch process group and token carriers to exit before killing them, on errors too; report incomplete cleanup with its facts. - Count descendants of the launch as started by the capture even when their environment cannot be read; treat a reused pid as a new process. - Follow symlinked desktop entries; name a flatpak's state after its application id; match flatpak windows by name only. - Stop on end of input; refuse empty, duplicate and reserved checkpoint names; require whitespace after the checkpoint keyword. - Stay on each walk root's device, and never walk or retain `/` or a directory containing the home; say so in the limitations. - Refuse a window manager that does not publish _NET_CLIENT_LIST. - Remove retained content when a capture fails before it is written. - Skip reading a file larger than the remaining content budget. - Record apt's archive origin for each package source. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): read an unset client list as no windows when supported xfwm4 leaves _NET_CLIENT_LIST unset while it manages no windows, so the capture refused an ordinary desktop with nothing open. Read _NET_SUPPORTED with the list: an unset list means no windows when the window manager supports it, and the capture is refused only when it does not. `xprop`'s "no such atom" output now reads as unset too. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): accept packages by apt's archive origin Accept a package source when apt reports its origin as Ubuntu for a noble suite, so mirrors count and PPAs or other repositories that merely have "ubuntu" in their URL do not. Captures made before origins were recorded fall back to Canonical's own archive hosts. Seed reads report why retained content could not be used. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): capture and export apps from vendor apt repositories A closed-source app installed from its vendor's apt repository, such as Typora, can now be captured and exported as a computer app. - The capture records each non-Ubuntu repository listing the installed version (uri, suite, components from apt's sources files, one-line or deb822) and the key that signs it: the signed-by key, or the trusted key that gpgv shows verifies the repository's signed index. The key is retained with the capture. - The capture records the packages owning the libraries the executable loads (DT_NEEDED with RUNPATH and the linker cache, through REA's ELF readers), since a vendor package may not depend on them. - The export declares a verified vendor repository as an AptSource with its key, installs a vendor package's library packages, and adds --no-sandbox to an Electron app's launch, since a container denies Chromium's sandbox. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): report a locked database at once in data/get A database the running app holds locked made each data/get wait sqlite's five-second busy timeout before reporting it. Record the Typora run in an agentenv computer in the verification. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * perf(desktop): detect key files without splitting the whole text Read lines one at a time and stop at the first that a key file view would drop, instead of splitting a file of up to 64 MiB into arrays before its format is known. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep symlinked homes and state folders under the home in exports - Respell a path under its state folder's logical spelling only when that spelling is under the captured home, so a symlinked HOME keeps its files; pair walked and logical state folders only when the capture lists the same number, and match the innermost folder first. - When two files map to one home path, keep the one present before the capture and name the other in the limitations. - Read key files in the generated data/get with the state view's rule, checked against it by running the helper under python3. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): end captures on zombies and keep cleanup owners - A zombie or dead process no longer keeps the session open. - Remove only the partial capture file this run created. - Keep the exact owners of handles and processes whose cleanup failed on the returned error, so a retry can release them; test the published capture's cleanup-failure branch with mixed outcomes and retries. - Release the application once even when the exit checkpoint fails. - A cancellation before the capture is written removes what it retained. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): vendor package review round - Match apt sources through `apt-get indextargets`, which covers flat `./` and `/` suites and gives each release file and sources entry. - Accept a key whose signature verifies even when the release carries another signature without a key here; keep only the verifying key from a keyring holding several (OpenPGP packet splitter). - Install the package from its repository's release (`name/<release>`), declare one source per URI and suite, support only the capture host's architecture, and refuse Ubuntu Pro repositories. - List only library packages the computer can install; walk libraries only for vendor installs, with RPATH inherited as ld.so does, normalized paths, and DT_NEEDED bounded while reading. - Put --no-sandbox after the program an env wrapper launches; keep the gpgv folder's owner when its removal fails; respect --max-file-bytes for keys; wait 0.25 s on a busy SQLite database in data/get. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): keep the vendor spec's gpgv command on one line A code span broken across lines left `<binary keyring>` for VitePress to read as an unclosed HTML tag, so the docs build failed. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): add a validated task to exported desktop applications Each capture can now yield one agentenv task in its exported bundle. An agent writes the task (a prompt plus declarative checks over the app's data/get views); REA validates it and stays model-free. - `describe-desktop-application-task` summarises a capture's net change per file (role, format, views before and after) and drafts checks. - Checks: file presence, lines present/absent/counted, JSON-pointer values, SQLite rows and counts. REA keeps a task only if a check fails on the seed and every check passes on the captured end state; a file that was not retained at the baseline counts as absent, as the computer starts. - `export-desktop-application --task` writes tasks/NAME.json (deploy, agent, skills, recording, prompt, verifier), a compiled verify.py that reads data/get, and an eval. A boundary test runs the verifier under python3 and checks it agrees with REA's evaluator on every check kind. - Docs, spec and skill guidance, with the solve-rate recipe. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * test(desktop): keep the seed test in its own block Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): record the task verifier driven in an agentenv computer Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): record the Typora task run in an agentenv computer Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep task checks bounded, complete and attributable - line_count counts lines holding a substring (contains) instead of matching a regular expression, which could stall the verifier on agent-written text and read differently in Python. - value_equals of a whole object or array is undecided on a truncated view. - The draft keeps a database whose rows changed under an unchanged hash, and a file whose truncated views match while it changed. - A task file that cannot be read keeps the reader's detail, and a failed cleanup keeps the read failure as its primary. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): leave a file with one version out of the task draft Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): update the task verification's test counts Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): record the task solve rate with Claude Code and Sonnet 5.5 Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): capture and export apps installed from a downloaded .deb capture-desktop-application --package-file reads the file's control fields with dpkg-deb and records its SHA-256, size and dependencies when it holds the installed package; the file itself is never kept. The library walk now also runs for local installs. export-desktop-application --package-url declares agentenv's Download(url, sha256) for that file, its dependencies and library packages as apt packages, and a run script that installs it with dpkg. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): seed app-named dotfiles and respell UTF-16 seeds The capture now treats dotfiles in the home named after the application (.varicad-cfg.ini, .notesrc) as state roots, so a file the app only reads during the capture is still seeded. The exported seeding respells the captured home in UTF-16 text files with a byte-order mark, keeping the mark. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): hold readiness until the app's own window shows An exported app is ready only once a window of its class that the taskbar lists is shown, so a splash screen of the class, which skips the taskbar, no longer counts as the app being up. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): record VariCAD captured, exported and run in an agentenv computer Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep exported views strict JSON for infinite and inexact numbers The exported data/get spells infinite and negative-zero SQLite reals as REA's SQLite reader does ("Infinity", "-Infinity", "-0"), and refuses a JSON file holding a number that reading would change (1e999, integers past 2^53, -0, rounded fractions) with the state view's own error, instead of a view with an infinity in it. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep package-file facts tied to one file and URLs unechoed - A --package-url refusal never repeats the URL, and credentials are checked before the scheme. - The package file's identity must hold between dpkg-deb's read and the hash. - A failed close keeps its cleanup owner even when the capture is cancelled. - Readiness also ignores windows typed as splash screens. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): record database logs and keep state changes distinct - A selected path that is not a directory brings its -wal and -journal as content roots, so the capture records whether they exist and retains them. - The state view treats a file as absent only under recorded content roots and refuses a database whose log presence is unknown. - JSON changes list containers too, so an array that becomes an object with the same members is a change. - Key file entries escape the key as a JSON pointer segment, so [a/b] c and [a] b/c stay apart. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep watching through unread samples and late workers - An unreadable window list is unknown, not zero windows, and is named in the limitations. - Before ending the session, live run-token carriers no parent link reached are tracked; an unreadable process table leaves the exit unknown. - An env prefix's assignments find the program and name its XDG folders. - flatpak run options that take a value are skipped with it, -- is honoured and a /arch/branch suffix is dropped from the id. - State directories include the entry's full id. - Path options refuse empty values; roots count toward the entry limit. - A capture file whose close failed stays owned and is retried on discard. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): bound apt sources, keep older captures and cleanup owners - Sources files parse into one stanza per line or deb822 paragraph with its URIs and suites kept as lists, so no URI x suite product is built. - Repository architectures and release are optional, so captures written before they were recorded parse; the export treats them as unrestricted and unknown. - Library sources are matched against every index of a declared repository's URI, suite and components. - Two failures side by side keep both causes and both cleanup owners, and a host file whose close fails reports a lease on its handle. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): match escaped key file entries and suggest containers through members - The draft's key file lookup uses the state view's escaped `group/key`, so a key holding `/` or `~` still gets its suggestion. - JSON and XML changes now list containers too; the draft suggests an added or removed container through its listed members, and a container only when none of its members is listed. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): read relative PATH entries from the launch folder A program, or an empty or relative PATH entry, is resolved from the folder the program starts in, as the launch does, so `env PATH=. app` with the entry's Path still finds the app. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * perf(desktop): compare JSON views on one shared path JSON and XML changes are found by walking both trees with one shared pointer path, building a pointer only for a listed value, so memory follows depth rather than every container's full path. A pointer over 4096 characters is counted but not listed. A 256-level document with 4000-character keys went from about 251 MiB of heap to under 1 MiB. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep JSON Lines as text in the exported reader The exported reader parses the whole text before an inexact number makes it JSON with an error, so JSON Lines with an integer above 2^53 stay text as in REA. Over-long integer spellings are unsafe without converting them. The guide no longer claims large integers keep their value. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep the state-path help free of dash-led words The CLI alias check reads `-wal` and `-journal` in help text as short flags, so the help names the write-ahead log and rollback journal instead. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): never record or export apt source credentials - Source URIs lose any user name and password as they are parsed, the way apt splits them, and so do index-target URIs and descriptions and the sources apt-cache policy lists, so matching works whether or not apt prints them. - A repository whose entry held credentials is marked `uri_credentials_removed`, and the export refuses it, or an older capture whose URI still holds them, with a reason that names no URL. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): look programs up without normalizing their paths Program paths and PATH entries are joined rather than resolved, so `..` after a symbolic link means what it means to the launch. The lookup moves to its own module. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): note inexact JSON numbers with a flag, not a list The exported reader only needs to know whether any number was inexact, so it keeps a boolean instead of every rejected spelling. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): refuse older captures that still hold apt credentials A capture written before credentials were removed counted the credentialed repository's libraries as installable, so the export refuses it whole and asks for a new capture rather than declaring packages no source offers. Recorded policy sources are redacted in export messages too. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * test(desktop): keep the credential fixture on an example host A login on a real host reads as a secret to the commit scanner, so the older capture's fixture uses apt.example.com like the other credential tests. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): tidy looked-up paths and search relative entries only for env Empty and `.` segments are dropped from a looked-up program path, which keeps `/snap/bin/` entries recognisable as snaps, while `..` is still left for the kernel. Relative and empty PATH entries are searched only in the PATH an `env` prefix sets, which travels with the exported launch; the host's own PATH does not. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep excluded and unwalked database logs unknown The capture records the paths every walk left out, and the state view treats a log as absent only under content roots the baseline walked completely and outside those exclusions, so an excluded or unvisited log leaves the database unread rather than read without it. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): judge JSON numbers after duplicate keys settle The exported reader marks an inexact number instead of flagging it during the parse, then looks for marks in the parsed value, so a number a later duplicate key overwrote no longer refuses the file, as in REA. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): redact a repository's policy source when it names it An older capture whose policy source matched no sources entry kept that text whole, and the export named the repository by it; the export now names it without any user name or password. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): never signal the launch group on unknown membership When the current read cannot observe a carrier's process group, the carrier is signalled on its own instead of letting an older process-table row grant a group-wide SIGTERM. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): look programs up in the launch's order and refuse host-relative finds The lookup searches PATH as the launch does, an empty entry meaning the launch folder, so inspection and launch name the same program. A program found only through a relative or empty entry of the host's own PATH is refused, since the exported computer would not have it; an env prefix's PATH travels with the command. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): count unchecked paths and keep logs behind them unknown Each walk counts the paths it could not stat and the directories on another device it did not enter, and the checkpoint records it as `unchecked_paths`. The state view treats a log as absent only when the baseline left nothing unchecked, so a log whose stat failed stays unknown. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * perf(desktop): scan parsed JSON with one iterator per level The check for marked numbers walks the parsed value with an iterator per nesting level instead of copying each container's children; a million-entry array went from about 15.7 MiB to 8.1 MiB of peak traced memory. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): start a relative program from its captured folder An exported launch whose program path is relative, such as `./app` from an entry's Path, now changes to the captured working directory first, as it already did for relative arguments. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): read zipped documents and name XML elements in task checks - A file that starts as a zip archive gets a `zip` view listing its entries in archive order, each with its own format and view, within limits on entries, bytes and expansion; the exported Python reader matches it. - A pointer segment applied to an array may be a selector, `[KEY=VALUE]` or `[@KEY=VALUE]` for XML attributes, matching exactly one member, so checks name elements instead of positions that shift between saves and versions. - `value_equals` takes an optional numeric `tolerance`, comparing numbers and numeric strings. - Changes inside zip views are listed by selector, and the task draft suggests name-addressed checks. FreeCAD's `.FCStd` is the first case: a hole cut into a plate is verified from the zipped `Document.xml` on files from both FreeCAD 0.21 and 1.0. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): record the desktop entry's package and app profiles in any case - A launch from a desktop entry records the package that owns the entry, so the export installs the app the entry starts (Writer, not only libreoffice-common); the program's own package is kept as executable_package when it differs. - State folders match the app's names ignoring letter case, as direct children of the XDG folders and the home, so GIMP's ~/.config/GIMP profile is seeded and reset; roles follow the same rule. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): read namespaced XML alike in REA and the exported verifier The exported Python reader now names XML elements and attributes as the document spells them (svg, text:p, sodipodi:docname, xml:space), with namespace declarations kept as attributes, which is what REA's view already produced. Export therefore accepts checks into Inkscape SVGs, LibreOffice content.xml and namespaced XML inside zips, and the draft suggests them. expat replaces ElementTree: one pass with namespace processing refuses what REA's parser refuses, and a streaming pass builds the view within the same node and depth limits. Text splits at CDATA, comments and processing instructions as REA's DOM splits it. Fixtures are real Inkscape 1.2.2 and LibreOffice 24.2 saves. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): install the program's own package and keep unknown owners unknown - When the desktop entry's package does not own the program it runs, the export installs the program's package too. The capture records why it cannot (executable_package_reason), and the export then refuses. - The export owns a state folder in the letter case the app wrote it, as the state roles already did, so data/get and data/reset cover a profile folder the app created during the capture. - A dpkg-query that fails or exits 2 or higher leaves the package unknown instead of reading as "no owner". Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep selector checks undecided on partial views and pair members one to one - A selector check is undecided while an array it searched may be missing members: a cut zip listing, or a truncated XML or entry view. Both evaluators agree. - Diffs pair the members of two versions one to one, so two new elements can no longer both match the same old one and hide an addition. - The task draft descends into JSON values and readable entries added whole, and never suggests an element by its position, last step included. - The export's namespace refusal also checks XML entries inside the value a pointer names, such as the whole listing. - The exported reader keeps REA's 500-level JSON depth limit, so one deep entry no longer hides the rest of the archive, and treats an entry whose data runs past its declared size as damaged. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): check approved packages against the repositories the export keeps The capture approved library packages and the program's package against every repository with a verified key, but the export can still leave a repository out: its key dropped by the content budget, an architecture restriction, or a conflicting key. Each repository now records the packages only it supplies (`supplies`). The export drops stranded library packages with a limitation, and refuses when the program's own package is stranded. Captures without `supplies` behave as before. The install limitations move to appExportInstallLimitations.ts to keep appExportInstall.ts under the line limit. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): compare type changes in place, keep empty values and unread entries honest - When an array becomes another type, its members are compared with what their pointers name there, so values that are still present no longer look removed. - The draft checks an added empty array or object by equality. - The exported reader's JSON depth check keeps one iterator per level and copies no wide list, back to the memory peak before the check. - An entry whose view could not be read is no `null` value: the draft suggests no check on it, and a check into its view fails in both evaluators with the read error. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): decide entry view checks only on entries with a view, and walk JSON depth by level - A check into an archive entry's view needs an entry read in a format with a view. A binary or unread entry's `view` of `null` no longer passes a `null` or absence check, in either evaluator, and the draft suggests no absence inside an entry that ends without a view. - REA's JSON depth check keeps one iterator per level instead of queuing a pair per member, so 800,000 nulls need 18 MiB instead of more than 64. The helper came with the state view; its Python twin was fixed here. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): refuse an export whose desktop entry runs a program no package owns When a package owns the desktop entry but no package owns the program it runs, such as one in ~/.local/bin first on PATH, the capture keeps the entry's package and records why the program cannot be installed. Export refuses instead of installing a package that does not bring that program. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): bound zip entry reads, export metadata checks, and diff by the evaluator's pointer rules - The exported reader inflates a zip entry at most 64 KiB at a time and stops a byte past its declared size, so a forged small size no longer holds the whole stream in memory (77.5 MiB to 0.1 MiB on a 32 KiB bomb). - The namespace refusal applies only to checks that depend on an entry's XML, so checks on an entry's name, size or digest, or on its absence, export. - Diffs find a member's counterpart by the evaluator's pointer rules, so a selector step across a type change no longer reports a present value removed. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): read at most 1,000 zip directory records, and index arrays once per diff - Both zip readers now read the central directory a record at a time, keep the first 1,000 file records and count the rest, then hand the library an archive whose directory holds only those. Directories are told apart as zip.js does, so the Python reader stops listing attribute-marked directories as files. 600,000 entries now peak at 1.3 MiB in Python (was 293.6 MiB) and need 24 MiB of heap in REA. - The exported Python zip reader moves to appExportPythonZip.ts. - Diffs look members up through an index built once per compared array, so 20,000 selector keys against 20,000 members take 31 ms, not 5.4 s. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): pick seed and end by checkpoint, and keep the capture host out of bundles - Export, task export and the task draft take --seed-checkpoint and --end-checkpoint, so one capture can make the seed in the app and then the edit; the defaults stay the baseline and the last version. - Capture reads apt's lists folder and trusted keys from apt-config, so a user-space apt-get update under APT_CONFIG is found, and starts the app without AGENTENV_* variables. - Capture records the host name and user. Export rewrites user@host, the host name as a whole name and the captured home in text, UTF-16 and dconf seeds, ships SEED_HOME=/home/user instead of the capture user's home, lists scrubbed and unscrubbable seeds, and refuses checks that name the host. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): check tasks against the shipped seed and scrub JSON and XML by value - Task validation reads the seed as the bundle ships it, after the scrub, so a task whose end value the scrub writes into the seed is refused. - JSON strings and XML text, attribute values, comments and CDATA are scrubbed as their decoded values and rewritten only when they change, so syntax stays valid and escaped identities are found. - One leftover search covers every shipped file's path and contents, generated module and dconf keys included; the strict whole-name rule is kept for replacing only. - A host named localhost is never replaced, but user@localhost is. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): resolve a record's selector keys together, and follow Zip64 locators without sentinels - The diff resolves all of a record's selector-shaped keys in one lookup: conditions are normalized per field, selectors grouped by field set, and only the values asked for are kept, so retained memory grows with the keys, not members times field sets (68 MB to 5.5 MB, 76 MB to 4.9 MB on the reported cases). - Both zip readers follow a Zip64 locator just before the end record whatever the classic record holds, as zipfile does, so valid Zip64 archives with ordinary classic values read again. The exported module's synthetic tail carries a real Zip64 end record, so bytes that only look like a locator no longer make zipfile refuse it. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): scrub JSON values only, with a scanner whose stack does not grow with string length JSON seeds are walked one string at a time, finding each closing quote with indexOf and a backslash count instead of a backtracking regex, so a 16,000,000-character string no longer overflows the stack. Member names are never rewritten, so two keys cannot collide; a name holding the host leaves the file in unscrubbed_files. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): scrub dconf and UTF-16 seeds by format, search check values for the host, and gate checks on the selected ends - dconf: the host scrub ran over the whole key file, so on a host named `true` `wrap=true` became an invalid `wrap=localhost`. Only decoded GVariant string values are scrubbed now; keys, groups, bytestrings, dictionary keys and object paths ship as captured and are reported. - Task identity: the host search read the serialized check, whose field names (`file`, `kind`) and default ids matched hosts of those names. It now reads the check's string values only. - Value checks: the text-file refusal read every recorded version; it now reads only the shipped seed and the end. - UTF-16 seeds: the plain scrubber renamed JSON keys and XML names; the decoded text's format now picks the scrubber, keeping the byte order mark. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): pair members by identity first, build selectors lazily, and refuse oversized and deep text before building a view - Pairing: an element with an identifier (name, id, xid, *:id) pairs only by it, so an unchanged id still names an edited element instead of a removal and an addition, and two objects of one type are never paired as a rename. Selectors keep the tag apart from each attribute condition and spell only the chosen one, so a long tag with many attributes no longer multiplies. - Size: REA's detection and the exported reader decide JSON with a scanner that builds no value, and refuse a view over the parsed-view limit before building it, in files and zip entries alike. - Deep text: the exported reader confirms the whole text is JSON before reporting a nesting depth error, as REA reads it. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): count a selector's matches over every sibling while identified elements choose only their identifiers Identity-first pairing also dropped an identified sibling's other attributes from the counts that prove a selector names one member, so a shared attribute such as `color` or `fill` could be chosen though it matched two siblings: the diff reported present elements removed and drafts lost their checks. Counting now covers every attribute of every sibling; only the choice is limited to an identified element's tag and identifiers. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): tell a UTF-16 seed's format without building it, and scrub XML without one piece per token Choosing the scrubber for a decoded UTF-16 seed ran the full state detection, which built the whole XML document (or JSON value), so a large seed within the capture limit could exhaust memory at export. A syntax pass now decides the format (the JSON token scan, and the XML parser's events keeping only the open elements), and the XML scrubber copies out only the spans it changes. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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8084916859 |
perf(eval): measure MCP catalog usage through the real Codex harness (#9035)
* perf(eval): measure MCP catalog usage through real Codex sessions * fix(eval): control the active Codex code mode host * fix(eval): reject unavailable host controls without hiding client errors * test(eval): cover the supported default and actionable client errors * docs(eval): record pinned Codex catalog and real package measurements * fix(eval): pin matrix identity and retain failed trial observations --------- Co-authored-by: gensokyo-dev <gensokyo-dev@users.noreply.github.com> |
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c3647ade1e |
fix(objdump)!: preserve unknown executable identity (#8824)
* fix(objdump)!: preserve unknown executable identity * fix(objdump): avoid claiming rejected architecture output * fix(objdump): align launch errors with command identity * test(objdump): avoid coupling identity checks to wording * test(objdump): align launch failure expectations |
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2ac6d3efe2 |
fix(process): re-read unreadable tokens before signaling and name the process (#8553)
* fix(process): re-read unreadable tokens before signaling and name the process Darwin KERN_PROCARGS2 samples a process's argument length and stack top before it reads the address space, and exec publishes the new length before it copies the new strings out (xnu sysctl_procargsx, exec_copyout_strings). A read during exec can return a zero-filled or stale strings area, and exec keeps the PID and start time that bracket the read. The final sweep already re-read such tokens, but the pre-signal group check read each member's token once, so one transient read of a live group member failed the whole cleanup. Move the bounded re-read into one shared fact-reading helper and use it for both the sweep and the pre-signal group check. The group check binds re-reads to the generation it first observed, so a reused PID stays unresolved; the sweep keeps classifying the PID's current process. An unreadable-token failure now carries the native identity read after the token and the summary names the candidate by its native name, parent, group and start identity. The Darwin helper and Linux procfs reader report the short native process name (p_comm/comm) for display. Fixes #8337 Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(process): refresh other pre-signal members after token re-read waits The pre-signal group check re-read only members whose token was unavailable, so a readable member kept the relation it had before the retry waits. A member that moved to another process group during those waits could be validated on its old group, and the old group signaled while the moved member kept running. After any retry wait, the shared re-read helper now reads every other live pre-signal fact once more with the same generation binding. A moved member then takes the existing changed-group path, which retains its ownership evidence and fails cleanup. An inconclusive refresh replaces the stale fact so it fails closed. Nothing changes when no re-read ran, and the sweep keeps classifying current processes because every group it finds is revalidated before signaling. Also cover PID reuse that happens before the re-read starts, where both re-read identities agree and only the first-read generation rejects the replacement's token. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(process): keep known identity changes final across token re-reads The pre-signal re-read treated a first read without a same-generation identity as unbound and replaced it with the re-read. On Linux the first read can already establish PID reuse (an ESRCH token whose exit check sees another generation); the re-read then classified the replacement, so a zombie replacement could let cleanup succeed. A pre-signal check now re-reads only same-generation facts. Changed, exited, exiting and foreign-token facts are final. Each attempt also re-reads the group's owned members instead of one separate refresh after the loop, so a member that moves groups or turns unreadable while another waits is seen within the same bound. The caller's run token selects the owned members, and the sweep keeps classifying current processes. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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f72638f6b1 |
feat(investigation)!: retain records across engine cleanup (#8361)
Separate engine cleanup, investigation reset and terminal disposal in the shared application owner. Keep stable Evidence IDs and full Unknown revision history through engine close and target changes; serialize reset with all record writers and cleanup owners, optionally acknowledging a complete checkpoint before clearing. Bound retained representation without eviction. Validation: 43 focused files / 533 distinct tests, source/type/lint/schema/documentation checks, nine genuine source cases across eight families, real Ghidra session identity and cleanup, and nine actual local Codex CLI terra/high runs with independent full-result and checkpoint audits. See docs/verification/investigation-lifecycle.md for measurements, partial attempts and verification limits. Fixes #8347. BREAKING CHANGE: close_binary retains investigation records. Use reset_investigation to clear them. Cross-process recovery requires an explicitly acknowledged Evidence bundle checkpoint. Assisted-by: Suika (gensokyo-skills:suika-scatter-gather-planning) |
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60149282fc |
test: strengthen integration oracles and verification (#8295)
* test: strengthen integration oracles and verification * test: bound lifecycle gates and strengthen workflow checks * test: verify complete paged and extracted results * test: preserve bytecode and cancellation evidence * test: strengthen retained evidence and fixture cleanup * test: require cross-projection bridge identities * test: retain fixture owners through cleanup failures * test: verify graph examples and project selectors * test: tighten provider and lifecycle regressions * test: consolidate hex coverage and bound cutter cleanup * test: bound subprocess output waits and strengthen graph checks * test: check mcp recovery and preserve cleanup owners * test: verify structured mcp argument failures * test: preserve artifact cleanup and gdb limit evidence * test: preserve evidence identities and bound provider gates * test: retain browser and comparison cleanup owners * test: bound startup and strengthen fixture oracles * test: bound lifecycle gates and verify recovered evidence * test: verify public outcomes and lifecycle ownership * test: assert precise evidence and release lifecycle gates * test: verify selected facts and bound cleanup waits * test: check retained evidence and decoded records * test: verify final reports and retain cleanup ownership * test: bound reviewed startup gates and retain cleanup * test: verify PE errors and preserve MCP cleanup * test: preserve MCP fixture cleanup ownership * test: release provider gates before late startup |
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a989c0e458 |
refactor(evidence): unify retained inputs across domains (#8299)
Declare logical Evidence sources once and resolve exact retained inputs through shared application workflows across 20 composition tools. Preserve domain-owned authentication, source closure, caller choices, coverage and resource admission. Validation includes public CLI/MCP regressions, local Codex terra/high trials and fresh-import real-artifact workflows. Measurements, failed attempts and coverage limits are recorded in docs/verification/evidence-input-composition-2026-10-31.md. Fixes #8293. Fixes #8281. Assisted-by: Suika (gensokyo-skills:suika-scatter-gather-planning) |
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23de10bb28 |
fix: streamline tests and preserve Darwin process ownership (#8275)
* test: strengthen suite guards and regression oracles * test: share JSON client registration contract * test: reuse fixtures and reduce repeated setup * fix(process): preserve ambiguous Darwin token ownership * test(process): bound child readiness waits |
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675d4076de |
test: strengthen regression oracles and cleanup ownership (#8152)
* test: strengthen suite oracles and cleanup ownership * test: reuse setup across independent scenarios (#8153) * Potential fix for pull request finding 'CodeQL / Improper code sanitization' Co-authored-by: Copilot Autofix powered by AI <62310815+github-advanced-security[bot]@users.noreply.github.com> --------- Co-authored-by: Copilot Autofix powered by AI <62310815+github-advanced-security[bot]@users.noreply.github.com> |
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c88e1b0b43 |
feat(guidance): search installed workflow sections (#6996)
* feat(guidance): search bundled REA workflow guidance * fix(guidance): address review findings * test(guidance): fix boundary and dispatcher coverage * test(setup): use supported doctor fixture runtime * fix(guidance): resolve CI conformance, coverage, and review findings * fix(guidance): own complete requests through shutdown * test(guidance): bound lifecycle gates and join failed work --------- Co-authored-by: Deepak-Kambala <deepakkambala07@gmail.com> Co-authored-by: gensokyo-dev <342580529+gensokyo-dev@users.noreply.github.com> |
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f60e42a9ae |
fix(mcp)!: bound validation work before tool dispatch (#7905)
Reuse the pinned SDK's combined array-element and object-member admission before canonical validation, deferred runtime loading and tool execution. Share a configurable finite allowance across eager/deferred HTTP and stdio, and project refusals to bounded, actionable transport resource errors. Preserve canonical CLI/application contracts, caller-selected input values, ordinary validation semantics and complete Evidence access. Exercise actual transport boundaries, real artifact/TShark workflows, packaged installation, continued service and downstream identity/capacity regressions. Fixes #7882 BREAKING CHANGE: MCP tool arguments now default to 1,024 combined array elements and object members per call. Select a larger positive finite REA_MCP_MAX_INPUT_ELEMENTS allowance and restart for larger inline inputs, or use retained/file selectors where supported. Inputs are never truncated. Assisted-by: Reimu (gensokyo-skills:reimu-incident-triage) Assisted-by: Kogasa (gensokyo-skills:kogasa-surprise-testing) Assisted-by: Yukari (gensokyo-skills:yukari-boundary-analysis) |
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570abe95f2 |
feat(android): link native declarations to static JNI candidates (#7472)
Link original DEX native declarations to per-ABI function exports and relocated static JNI table candidates through shared CLI/MCP workflows. Preserve global attribution ambiguity, exact provenance, partial coverage and retained Evidence; default MCP delivery to bounded summaries with filtered/batch pages. Use one immutable ELF relocation decoder with streaming IL2CPP materialization, cooperative bounded export/version parsing and bounded JNI state. Reuse validated session inventories without loading target libraries or executing JNI code. Validation: relevant type/lint/build and parser/domain/public CLI/MCP regressions; genuine four-ABI NDK fixtures and independent library/slot oracles; actual JDK/JADX Conscrypt workflows with retained-source removal. Full measurements and limitations are recorded in docs/verification/android-jni-bindings-2026-10-27.md. Closes #6403. |
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03f17cf41d |
feat(android): apply caller-selected R8 mapping evidence (#7456)
Apply caller-selected R8/ProGuard mappings to shared Android inspections, preserving raw identities, exact verification, ambiguity and provenance. Add retained summaries and bounded/cached parsing, with measured real R8/Conscrypt workflows and review fixes. Fixes #6329. Co-authored-by: 555aaditya <107977627+555aaditya@users.noreply.github.com> |
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2817d30ab2 |
fix(docs): preserve verification reports after experiment archival (#7462)
Move the retained allocation report and unchanged receipt JSON into verification documentation. Keep one report producer, repair current and archived links, document test-support ownership, and remove retired lint inputs. Fixes #7458. Validated focused/Python checks, report consistency, docs rendering, and real Bash CLI/MCP facts against an independent oracle. Greptile reviewed all seven files without comments. CI source/Windows/shard-8 failures match clean-main or existing-main controls; the requester authorized merging with those established failures. Codex review quota was unavailable. |
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365fb03e73 | chore: archive analysis efficiency experiments | ||
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9eb8ba2b29 | refactor(cli): use builtin argument owner directly | ||
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329325049c | refactor(cli): retain typed analysis outcomes through delivery | ||
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9750486e78 |
fix(mcp): normalize compact schemas for strict gateways (#3806)
* fix(mcp): make compact schemas gateway compatible * test(mcp): bind input precision assertions to the advertised profile * test(mcp): own schema assertions and validator lifetimes --------- Co-authored-by: morluto <76467478+morluto@users.noreply.github.com> |
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5938581b37 | fix(async): own completion across test and provider boundaries | ||
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bdf15b9bd5 |
refactor(javascript): share the reconstruction input contract
Remove the reconstruction-only request schema and consume the canonical parsed JavaScript application input. Production already owns parsing at the service boundary; direct test seams now use that same schema instead of a weaker path contract. Preserve format, filesystem, source selection and lifecycle validation. Add a NUL-path regression for canonical admission and typed input-error projection. Verified 63 focused cases plus static, build, docs, discovery and duplication checks; no target execution or real-provider claims. |
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d68d03e88f |
test(mcp): consolidate fixture connection and cleanup ownership
Route application and provider-environment harnesses through the shared MCP connection owner. Join accepted handshakes during shutdown, retain each failed close for retry, preserve primary and independent cleanup failures, and release provider files only after their session closes. Surface BinarySession close Result errors in production and artifact fixture teardown. Add real SDK and descriptor-boundary regressions for startup races, concurrent cleanup, mixed failures and recovery. Use a provider-free plist for descriptor ownership so installed deep engines cannot change the test outcome. |
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c2caae88f8 |
refactor(cli): share process environment preparation
Give the launcher and shared command worker one lightweight owner for package-version binding, Windows empty-home handling and Android browser-cache defaults. Preserve per-command preparation and environment restoration, package the owner explicitly, and retain its package and JavaScript recovery CI scopes. Validation: dispatcher/version/shared-session, home fallback, evaluator/MCP/process cleanup and CI scope tests passed. Functional archive/install/repack, installed static CLI analysis and MCP checks passed; no real Codex/model trial or Windows/Termux runtime qualification was performed. |
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2bd981b017 | refactor(tests): consolidate compiled CLI session ownership | ||
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6021efd371 | refactor(browser): move bundle fixture composition out of runtime | ||
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8681752c7b |
fix(cli): share doctor argument ownership across dispatchers
Use the existing builtin argument split for the invalid-log-level doctor exemption, removing independent flag scanners from the launcher and reusable CLI test worker. Empty output values and doctor-looking command data now preserve configuration refusal precedence; shell completion stays transport data. Check fresh and shared frontends with production argument parsing, retain both doctor readiness paths, and verify non-doctor requests stop before the real launcher imports command handlers. |
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1be8e9601b | test(contracts): align catalog and admission fixtures with current contracts | ||
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5d2c8c2b78 |
feat(cli)!: export row-oriented results as JSON Lines (#5629)
* feat(cli): add JSON Lines output for row-oriented results (#5487) - Support opt-in JSON Lines format (--format jsonl) for row-oriented results and collection views with clear record boundaries - Preserve stable source identities and stream records deterministically line-by-line - Emit final coverage and limitation metadata as a distinct line with https://rea.dev/schemas/jsonl-coverage-v1.json to prevent confusion with data rows - Distinguish error outputs with https://rea.dev/schemas/jsonl-error-v1.json - Reject non-row-oriented results that lack record boundaries with an unreadable_output error - Document JSON Lines streaming conventions in docs/cli.md - Add boundary tests covering empty results, multiline strings, partial coverage, large fields, and non-row rejection * fix(cli): preserve diagnostics, provenance, and nested collections in JSONL * fix(cli): frame classified failures and reject unrepresented JSONL facets --------- Co-authored-by: gensokyo-dev <342580529+gensokyo-dev@users.noreply.github.com> |
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8d8d85ba22 | refactor(cli): share parsed output controls across consumers | ||
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+12 |
169512a35b |
feat(cli): report version and runtime with an explicit output format (#6530)
* feat(cli): report version and runtime with an explicit output format
`rea --version --json` and `--version --format <format>` ignored the format
and printed only the bare version, so support reports gathered the runtime
and platform by hand.
A root --version request that selects a format now renders a documented
report: package name and version, JavaScript runtime and version, platform,
architecture, and whether the runtime satisfies the supported range. It
contains no paths, environment values, user or host names, and starts no
provider. Plain --version is unchanged, --help keeps precedence, and other
output controls keep Incur's plain version.
The runtime verdict uses a new shared supportsJavaScriptRuntime rule that
rea doctor now uses too, so both judge Bun by its Node.js compatibility
version. mcp doctor's private JSON/format renderer moves to cliOutput as
renderCliDocument and is shared with the version report.
Closes #5483
* refactor(errors): centralize input failure construction
Carry caller messages through the existing schema issue owner instead of constructing and discarding an intermediate input error. Remove forwarding schema helpers and migrate equivalent constructors across investigation, firmware, dylib, process, and screenshot workflows while preserving diagnostic paths and causes.
* docs(readme): add Roman Urdu edition (#6499)
* docs(readme): add Roman Urdu edition
Register ur-Latn with a pending website catalog and preserve English command examples.
Script-tag handling follows morluto's shared helper proposed in PR #2043 (
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23def04096 | test(apktool): own lifecycle fixtures and process observations | ||
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37e92e430b | refactor(javascript): centralize package and JSON document facts | ||
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8451b961ad |
feat(artifacts): make ASAR header admission configurable (#6209)
* feat(artifacts): make ASAR header admission configurable ASAR header/index admission was a fixed 16 MiB with no override, so operators with large Electron indexes could only extract the archive. REA_ASAR_MAX_HEADER_BYTES now sets it (default 16777216, maximum 268435456). One owner resolves the effective admission for the classification probe, inventory, ASAR reader and Electron file scope, including the Electron header cache budget. Startup and doctor validate the setting; admission refuses an invalid value instead of falling back. Recovery and error details name the effective value and its source. Fixes #6176 Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(artifacts): resolve ASAR header admission from the caller's environment The admission read process.env, so composition roots that select their own environment (createDirectAnalysis, createServer, CLI, optional observation factories) could not raise or lower it, and an ambient value leaked into callers that left it unset. Nothing reads process.env now. ArtifactProvider and extraction resolve the admission from their environment; JavaScript analysis parses it from the environment its server or CLI caller passes and refuses an invalid value; the Electron and V8 providers receive it from their factories. Inventory, nested ASAR readers, classification probes and Electron page authorization carry that one value. A header cached by Electron under a larger admission is refused for a smaller one. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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c1a0561bf3 | refactor(mobile): retain inventory sources at the projection boundary | ||
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647717c050 |
perf(javascript): reuse the source-analysis worker within a process (#5819)
* perf(javascript): reuse the source-analysis worker within a process Each analyze-javascript-application call started a new Node worker. That startup, not fixture IO or the shared CLI session, dominated the slow loader-review and factory-completion files. Park one healthy worker on the artifact resource scope and on the CLI process. Stop it when the scope, session, or one-shot process ends. Do not reuse after failure, cancellation, or a different heap or timeout. Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(cli): close the JavaScript worker when dispatch throws Minimal dispatcher runtimes now export a no-op closeCliJavaScriptResources, and CLI dispatch plus output rendering always await that cleanup. A dispatch failure and a cleanup failure are both reported. Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(artifacts): report close-hook failures with retained cleanup When retained cleanup and the scope close hook both fail, the close error keeps both causes and both resource labels. The pending owners and the hook stay registered so the next close retries each path. Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(javascript): stop a replaced analysis worker before the next one starts A heap or timeout change now closes the parked worker before constructing its replacement. The scope retains that process only when the close fails. Co-authored-by: morluto <morluto@users.noreply.github.com> * style: format worker-reuse close and launch helpers Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(cli): report a failed JavaScript worker shutdown before exit Share one in-flight close and drop the CLI scope only after it succeeds, so a later caller retries a worker that is still owned. The one-shot exit callback writes that failure and exits non-zero, while a closed stdout pipe still exits 141. Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(javascript): keep a worker parked during an overlapping limit change Claim the scope slot only when it is still empty after the replaced worker closes. A concurrent analysis that parked another healthy worker keeps that process, and the extra worker is closed through its own port. Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(artifacts): run later close hooks when an earlier hook fails Run every registered close hook on each close. One failure is returned unchanged, and several failures are aggregated so a later hook is not skipped. Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(javascript): fail a limit change when the previous worker stays alive A failed close used to be retained and then ignored, so MCP could return a successful analysis while the old process and its replacement were both owned. The request now fails before the replacement is constructed, and the still-live worker stays owned for a later close. Co-authored-by: morluto <morluto@users.noreply.github.com> --------- Co-authored-by: Cursor Agent <cursoragent@cursor.com> Co-authored-by: morluto <morluto@users.noreply.github.com> |
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0ad42752d3 |
perf(test): reuse one compiled CLI for the remaining hot command files (#5784)
Go, IL2CPP, dylib resolution, and application-workflow tests were still starting a compiled CLI for every command. They now reuse one process per file. Warm focused runs dropped from 40s, 46s, 35s, and 21s to 14s, 21s, 20s, and 2s. Co-authored-by: Cursor Agent <cursoragent@cursor.com> |
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71b696582b |
perf(test): reuse one compiled CLI for export-binding parity (#5679)
* perf(test): reuse one compiled CLI for export-binding parity The slow export-binding cases each spawned the compiled CLI three times. One warm process now serves those JSON commands from a single command instance, so startup and retained registrations are paid once per file. Co-authored-by: morluto <morluto@users.noreply.github.com> * style(test): format the warm CLI session oxfmt --check rejected the session and its worker. Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(test): report warm CLI shutdown, deadlines, and exit status A compiled CLI session that needed a signal after stdin closed reported success. A command that never answered left later checks waiting, and a failure recorded only on process.exitCode was returned as status 0. Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(test): close the warm CLI worker when a status check fails The failure-then-success case only closed the compiled worker after both assertions passed. Register the close with the test so a failed check still stops the child. Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(test): retain a timed-out compiled CLI worker until it exits A request deadline cleared the child before SIGKILL was observed. The next command could start a replacement, and close could miss the original process. Retired workers stay owned until exit, and a failed stop remains for a later close to retry. Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(test): reject a compiled CLI launch that close interrupts Closing during the ready handshake detached the child before the launch promise settled. The queued command then waited on the startup timer. Close now rejects that startup before the child is detached. Co-authored-by: morluto <morluto@users.noreply.github.com> --------- Co-authored-by: Cursor Agent <cursoragent@cursor.com> Co-authored-by: morluto <morluto@users.noreply.github.com> |
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ccfaf520b7 |
perf(test): reuse one compiled CLI process per JavaScript application file (#5676)
* perf(test): reuse one compiled CLI process per JavaScript application file analyzeJavaScriptDirectory CLI cases were still starting a fresh process after stdio MCP reuse. Keep one compiled process for the same child environment so later cases skip Node and CLI startup. Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(test): bound shared CLI worker lifetime Retire a worker that reports a fatal failure before resolving that command, and wait for it to exit before the next command starts. Join a session frame once its bytes are complete instead of copying the unfinished buffer on every chunk. Restart the shared process after 32 commands or a reported 1 GiB resident set so one file does not keep a single heap high-water mark. Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(test): retire a shared CLI worker after a transport failure A malformed session frame rejected the command and sent SIGTERM without clearing the worker. signalCode stays unset until the process exits, so the next queued command could write to that same process. Transport failures now use the fatal-reply retirement path and the queue waits for that exit. Co-authored-by: morluto <morluto@users.noreply.github.com> --------- Co-authored-by: Cursor Agent <cursoragent@cursor.com> Co-authored-by: morluto <morluto@users.noreply.github.com> |
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949966712e |
fix(files): preserve physical read failures across late cancellation
Tag physical read outcomes at the owning boundary and preserve opaque caller cancellation reasons through JSON pipelines and reference imports. Share named bounded-read options across consumers and retain failed cleanup ownership for retry. Closes #5686 |
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7dd6941393 | refactor(test): share browser and apktool fixture lifecycles | ||
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5518363aa6 | test(artifacts): compare matching resource-root workflows | ||
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c38f96fa69 |
test(cli): keep IPC trace input under the Linux spawn limit (#5673)
* test(cli): keep IPC trace input under the Linux spawn limit The listener-callsite CLI builds one trace argument from the full application Evidence document. On 4 KiB-page Linux that string exceeds MAX_ARG_STRLEN, so spawn throws E2BIG before the command starts. Keep the document in a file, require the spawned argv to fit the single-argument budget, and lock that budget through the test process registry. Co-authored-by: morluto <morluto@users.noreply.github.com> * test(process): size the spawn ceiling from ARG_MAX and MAX_ARG_STRLEN A payload at the single-string limit still fails execve with E2BIG when the stack shrinks ARG_MAX below the rest of the image. Accept only the bytes that fit both budgets, and skip that success spawn when the fixed argv and environment already fill ARG_MAX. Co-authored-by: morluto <morluto@users.noreply.github.com> * style(test): format files rejected by oxfmt in static checks check:ci:fast failed format:check on the CLI fixture import and, after merging main, on the admission test's new command-abort case. Co-authored-by: morluto <morluto@users.noreply.github.com> --------- Co-authored-by: Cursor Agent <cursoragent@cursor.com> Co-authored-by: morluto <morluto@users.noreply.github.com> |
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40428da1dd |
perf(test): reuse one stdio MCP server per JavaScript application file (#5658)
* perf(test): reuse one stdio MCP server per JavaScript application file Repeated analyzeJavaScriptDirectory MCP cases started a full server for every case. Share one file-scoped server and compile cache so later cases skip that startup while CLI cases still launch a fresh process. Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(test): close in-flight shared MCP startup with the file File teardown waits for a stdio session that is still starting, skips a server once close has begun, and still closes one registered during that wait. The later-case reuse test can run without the earlier case. Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(test): keep a failed MCP handshake when cleanup fails The shared session reports the startup error and carries the cleanup failure as its cause. A cleanup that failed stays owned and is retried on close without running a cleanup that already succeeded. Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(test): fail shared MCP cleanup when the rejection has no reason A cleanup rejection of undefined still fails the drain and stays owned. Close caches completion only after every retained cleanup succeeds, so a later close can release it. Co-authored-by: morluto <morluto@users.noreply.github.com> * fix(test): keep one MCP server while failed cleanup is retained A later call retries retained cleanup before opening another server. The new server starts only after that cleanup succeeds. Co-authored-by: morluto <morluto@users.noreply.github.com> --------- Co-authored-by: Cursor Agent <cursoragent@cursor.com> Co-authored-by: morluto <morluto@users.noreply.github.com> |
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e9fc8fb30c |
fix(javascript): preserve runtime path bytes and Electron ownership (#4941)
* fix(javascript): preserve literal percent runtime paths * fix(javascript): ignore resolve prefixes before the final anchor * fix(electron): retain application roots for loadFile declarations * fix(electron): resolve loadFile from enclosing application package * fix(electron): retain outer application root across package scopes * fix(electron): derive application ownership from inventoried packages * fix(electron): retain resolved package entrypoint ownership * fix(electron): preserve competing application ownership * fix(electron): retain invalid and omitted runtime ownership * fix(electron): preserve omitted module ownership and runtime paths * fix(electron): preserve proven roots before confining page paths * fix(electron): retain possible owners behind missing imports * fix(electron): distinguish absent imports and owned page candidates * fix(electron): keep unavailable JSON out of owner gaps * fix(electron): retain exact loader formats and default entry status * fix(electron): retain unavailable entrypoint ownership candidates * test(ghidra): preserve Windows Node probe prerequisites * test(ghidra): assert cancellation during profile shutdown * fix(electron): separate examined imports from frontend ownership * fix(electron): retain unavailable directory entrypoint owners * test(jeb): retain Linux ownership prerequisite in isolation * fix(javascript): retain unchecked loader ownership and literal main paths * fix(javascript): preserve runtime paths and call-site module aliases * fix(javascript): bound module alias traversal and preserve projections * fix(javascript): retain host module and nested artifact path boundaries * fix(javascript): preserve ESM and archive module loader provenance * test(javascript): distinguish unmapped containers from missing exports * fix: retain default module aliases and Electron builtin imports * fix: preserve host file URL and inward ASAR ownership * fix: preserve CommonJS file URL classification in CI fixtures * fix: retain bound module loaders and Windows entrypoint uncertainty * fix: retain ASAR uncertainty and invalidate changed Electron app roots * fix(javascript): retain ownership uncertainty across loader boundaries * fix(javascript): preserve loader sources and bound alias queries * fix(javascript): retain destructured loader sources * fix(javascript): preserve loader uncertainty at resolution boundaries * fix(javascript): preserve callable and package launch ownership * fix(javascript): preserve captured values across member reads * test(process): assert tagged filesystem cancellation failures * fix(javascript): preserve inventory bases and invocation read timing * fix(javascript): preserve ownership across indirect and unread loads * test(javascript): order fixture directory creation on Windows * test(javascript): share ordered filesystem fixture writer * fix(javascript): unify loader provenance and package validation * fix(javascript): preserve captured Node require loader values * fix(javascript): preserve loader invocation authority * fix(javascript): verify generic loader invocation authority * fix(javascript): preserve conditional loader method alternatives * fix(javascript): require proven factories for source association * fix(javascript): honor replaced Electron app path setters * fix(javascript): prove path and assignment source ownership * fix(javascript): retain native delegate eligibility through shared writes * fix(process): settle stale baseline errors after confirmed absence * fix(javascript): preserve assignment and path boundary evidence * fix(javascript): prove source-directory resolve anchors * fix: preserve application path provenance and portable schemas * fix(javascript): retain CommonJS exported setter effects * fix: isolate Linux identity observations and retain native module exports * fix(javascript): preserve published app and helper provenance * fix(javascript): normalize typed stores and native path fixtures |
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10f1994fe1 |
feat(environment): serve an environment manifest as a replay environment (#4975)
Serve retained capture Evidence as a bounded MCP replay environment with discovery. Preserve default stdio, caller-selected facts and complete source Evidence. Fix numeric fidelity, argument identity, startup cancellation and bounded discovery, query/path matching and output metadata. Verify real recorded API data and public CLI/MCP workflows; preserve explicit gaps for Windows and third-party hosts. Co-authored-by: Edgar Arakelyan <edgar.arakelyan@scale.com> Co-authored-by: gensokyo-dev <gensokyo-dev@users.noreply.github.com> Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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60bd646478 |
feat(mcp): add opt-in streamable HTTP transport (#4955)
Add an explicit Streamable HTTP entry for environment/gateway hosts while keeping stdio registrations and default behavior. Preserve the shared provider/session owner across DELETE and replacement; fence and drain tool/completion work before handover or teardown. Bound HTTP input and plain-response admission, cancel refused bodies, join whole exchanges and asynchronous response cleanup before provider hooks, gate startup readiness, and reject queued HTTP/1.1 pipelining while retaining sequential keep-alive. Validation: 8 static/build tasks, 83 adapter tests and registry metadata pass. A real installed gh binary produces seven equivalent CLI/stdio/HTTP reports with DELETE/replacement and clean signal shutdown. Broader local native-provider/ownership failures reproduce on clean main and are documented with limitations in the PR. Co-authored-by: Edgar Arakelyan <edgar.arakelyan@scale.com> Co-authored-by: gensokyo-dev <342580529+gensokyo-dev@users.noreply.github.com> |
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093ce695f0 |
fix(tests): preserve temporary fixture ownership
Normalize shared test fixture prefixes using the hygiene verifier ownership rule. Preserve caller labels, existing owned names, and third-party caches; cover retained fixtures and exact cleanup through subprocess regressions. |
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9d5b931875 |
perf(tests): reuse MCP connections within source matrices
Reuse test-owned stdio MCP connections within two stateless source-analysis matrices while retaining every original CLI/MCP scenario, schema/Evidence checks and test-finished cleanup. Add cross-input identity controls. Validation: 23 focused public-workflow tests and complete check:ci passed; stale-response fault detected. Exact-head hosted CI and available review passed. Pinned workload measurements and their limits are recorded in the PR. Refs #4737. |
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55cef2566a |
perf(tests): reuse CLI compilation for exported binding checks
Reuse the existing CLI compilation policy in the exported binding acceptance matrix. Own and clean a fresh cache per file while preserving caller cache and coverage choices, all 92 cases, and every live CLI/MCP request and oracle. Fixes #4079 Co-authored-by: Kaoru0822 <208281322+kaoru0822-kitauji@users.noreply.github.com> |
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11d38cbc00 |
test(mcp): verify retained Interface Builder limits
Verify retained hierarchy limits and summary identity through the production artifact-only composition and real MCP SDK, alongside compiled CLI controls. Deep-provider selection is a separate lane. Co-authored-by: Aliciawque <166712943+Aliciawque@users.noreply.github.com> |
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4d4631ac94 |
test: harden verification fixtures and runtime coverage
Use exact discovered test identities, production MCP sessions and byte-exact setup backups. Add CLI signal cleanup coverage and independent Ghidra, Go and firmware verification assertions; prune redundant test configuration and preserve platform limits. |