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470
Commits
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d9c9e6ea67 | fix(cli): retain completed Evidence through finalization failures (#9469) | ||
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25d3c7237f | fix(paths): enforce selected path contracts at admission (#9465) | ||
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5044e20171 |
test: focus diagnostics and evidence checks on behavior (#9303)
* test: focus configuration diagnostics on their owners Preserve shape errors, selected paths, recovery guidance, and unchanged-file behavior across parser, setup, and uninstall boundaries. * test: focus artifact and evidence checks on behavior Retain format, identity, malformed-input, and cleanup coverage while removing fixed prose and closing the admitted test source. * refactor(debugger): use configured session admission limits * test: focus evidence and diagnostics on behavior * fix(test): restore verifier export and formatting * test(config): verify debugger limit ranges * test(rizin): keep fixture executable authoritative * test(rizin): isolate debugger fixture environment |
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b81da90354 |
feat(native): page retained procedure references (#8588)
* feat(native): page retained feature traces * fix(snapshot): retain linked source evidence for replay * test(snapshot): verify linked foreign evidence stays scoped * feat(native): page retained procedure references * docs(mcp): clarify imported residual questions * docs(mcp): guide trace reference classification * fix(cli): report result sources when Evidence publication fails A trace keeps linked sources on the result. Use those records for the undelivered source closure as well as the bundle, so a refused output does not report them as not captured. * ci: rerun pull request checks The merge of origin/main did not start the CI workflow for this head. * fix(native): document shared procedure endpoints and the required selector Describe kind shared and items.endpoints instead of inline procedure copies. State that procedure-references requires a positional selector or --procedure. * fix(native): count procedure-reference endpoints before keeping a row Include the shared endpoint table in the page budget, with JSON punctuation, and store a new procedure only when its row is accepted. * fix(native): measure a procedure endpoint once before its comparison key Size the candidate before building one canonical identity, and reuse that key for the selected-procedure and shared-endpoint checks. * fix(native): reject an oversized procedure endpoint before canonicalizing it When the JSON size already exceeds every stored identity, skip the canonical string and keep the row out of the page. * fix(native): describe procedure-reference direction and coverage Avoid execution wording in the tool description, and give the CLI direction option the help text the catalog requires. * fix(native): compare endpoint size with UTF-8 identity length Keep one running maximum of stored identity bytes. A multibyte selected procedure is recognized when its JSON no longer fits the page. * test(cli): count procedure-references as a dedicated command The MCP tool has a CLI command, so it is no longer an MCP-only exception. * test(native): catch the string-length endpoint comparison Use a 200,000-character multibyte selected procedure and a shorter ASCII endpoint so the old JavaScript length check drops the selected row. * ci: rerun after the binary-layout toolchain timeout The required check failed because the toolchain install exceeded 15 minutes. The same job completed on the previous head, and this commit does not change the procedure-reference behavior. * test: stabilize capture decoder exhaustion coverage --------- Co-authored-by: Cursor Agent <cursoragent@cursor.com> |
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887b99888e |
fix(ghidra)!: distinguish skipped overlays in byte search (#8608)
* fix(ghidra)!: distinguish skipped overlays in byte search BREAKING CHANGE: Byte search results require skipped_overlays; loaded overlays no longer appear in skipped_not_loaded. The Ghidra profile changes so prior snapshots are not replayed. * fix(cli): explain overlay byte search scope * test(ghidra): exercise overlay search cursor handoff * test(ghidra): avoid freezing byte search help wording * test(ghidra): classify search start as an address bound * docs(ghidra): match the raw lane's overlay coverage The raw Ghidra lane checks a manually created overlay block through MCP. Say that, and do not claim an overlapping-load ELF, CLI search, or snapshot cursor handoff. --------- Co-authored-by: Cursor Agent <cursoragent@cursor.com> |
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015a02d57b |
feat(ghidra)!: identify containing code and data (#8777)
* feat(ghidra)!: identify containing listed instructions * fix(ghidra): validate instruction containment status * fix(ghidra): validate containment coordinates * feat(ghidra): identify containing defined data * test(ghidra): correct snapshot and containment controls * docs(native): distinguish object and dynamic type sizes * docs(cli): retain incoming reference guidance * fix(mcp): clarify data object address guidance * test(ghidra): preserve defined data in reference fixtures |
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9109e6f6a7 |
fix(ghidra): guide ambiguous selector recovery (#8768)
* fix(ghidra): guide ambiguous procedure selection * test(ghidra): distinguish malformed selectors * fix(ghidra): distinguish ambiguous file mappings * fix(ghidra): name mapping inspection workflows * docs(mcp): expose strict Ghidra address selection * docs(cli): explain Ghidra qualified address selection * test(ghidra): cover published ambiguous selector codes MCP and projection tests use procedure_ambiguous and file_offset_ambiguous, and match the recovery main already publishes for those codes. * fix(ghidra): name the space-qualified address that avoids offset fallback file_offset_ambiguous now tells the caller to use a form such as ram:0x1000. A bare 0x selector repeats the file-offset lookup. The MCP test requires that route and inspect_native_load_image. --------- Co-authored-by: Cursor Agent <cursoragent@cursor.com> |
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56fb5219ce |
fix(cli): retain linked sources in function bundles (#8873)
* fix: preserve source closure during snapshot replay
* fix: revalidate restored snapshot sources lazily
* fix: bound and share source-closure checks
* fix(cli): retain function evidence sources in bundles
* fix(cli): preserve partially captured source closure
* test(ghidra): verify saved project evidence bundles
* fix(cli): retain sources across incomplete finalization
* fix: supervise function bundle verifier processes
* style(test): format CLI help default annotations (#9280)
(cherry picked from commit
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6ca4e1368c |
fix(cli): guide analysts to typed incoming references (#8514)
Co-authored-by: Cursor Agent <cursoragent@cursor.com> |
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352a846127 |
test: reduce brittle assertions and test-only runtime paths (#9289)
* test: focus assertions on behavioral evidence Prune redundant and wording-coupled checks while retaining diagnostic, parser, recovery, and cleanup coverage. * refactor: remove test-only wrappers and duplicate checks Exercise production operations through test fixtures, remove unused adapters, and keep managed-member uncertainty guidance under its existing owner. * test: focus process validation on diagnostic facts * refactor: remove test-only runtime helpers Move semantic evidence fixture setup out of runtime and remove unused Windows settle recovery helpers while checking configured defaults independently. * test: focus artifact diagnostics on format facts * test: verify retained cleanup guidance delivery |
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4bb53000a3 |
fix(ghidra): clarify function annotation selectors (#8584)
* fix(ghidra): clarify function annotation selectors * test(ghidra): compare catalog guidance with its contract --------- Co-authored-by: Cursor Agent <cursoragent@cursor.com> |
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e47bb152c2 |
feat(native): retry failed directory decompiles independently (#8811)
* feat(kuna): allow independent decompile retries
* fix(kuna): correct independent retry recovery
* feat(native): retain decompile export source facts
* test(native): verify historical export source facts
* test(kuna): bound retry lifecycle acknowledgement
* test(native): retain source after export conflict
* feat(kuna): allow independent decompile retries
* fix(kuna): correct independent retry recovery
* test(kuna): bound retry lifecycle acknowledgement
* feat(native): retry failed directory decompiles independently
* fix(native): guide directory retry after provider failure
* fix(native): point retry caveats to the journal
* style(test): format CLI help default annotations (#9280)
(cherry picked from commit
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81c09888bf |
feat(kuna): allow independent decompile retries (#8793)
* feat(kuna): allow independent decompile retries
* fix(kuna): correct independent retry recovery
* test(kuna): bound retry lifecycle acknowledgement
* style(test): format CLI help default annotations (#9280)
(cherry picked from commit
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f8bb792f15 |
fix(cli): stop restating schema defaults in help descriptions (#9278)
The help renderer appends "(default: X)" whenever the option field declares a
schema default, so descriptions that also spell the default out print it twice:
--block-size <value> Power-of-two block size from 256 to 65536 bytes
(default 4096) (default: 4096)
Remove the hand-written default from the eleven options that own a schema
default across inspect-byte-entropy, inspect-devicetree,
inspect-packet-capture, inspect-packet-fields, inspect-signal-decoders and
decode-signal-recording, matching the rule in cliDecimalField's contract that
the domain field owns bounds, defaults and help.
Options without a schema default keep their prose: --match_limit, --line_limit,
--limit and --packet_limit are nullable or optional, so the renderer emits no
annotation and the description is the only place the effective value appears.
Add a boundary test asserting each such option states its default exactly once,
so a restated default cannot come back unnoticed.
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c5301e6145 | feat(desktop): capture, draft, export and witness a task inside a build computer (#9045) | ||
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b31fc5d5fb |
fix(cli): advertise domain constraints for selector and path options (#9181)
* fix(cli): advertise domain constraints for selector and path options Android class, method, and mapping fields, ADB setting keys, and browser endpoints used bare strings in --schema. They now reuse the domain fields, so empty selectors, relative mapping paths, and malformed setting keys fail in the advertised schema. * fix(cli): keep selector limits when argument parsing rejects them Empty browser and Electron selectors now fail in the CLI parser, so their diagnostics are VALIDATION_ERROR with the one-character minimum. ADB setting keys stay on the selector repair path, which restores maximum 256 and the identifier pattern. * test(cli): assert empty-selector codes without frozen prose Empty browser and Electron selectors still fail as VALIDATION_ERROR too_small on the named field. The tests no longer copy Zod's sentence. * test(cli): compare endpoint diagnostics with the domain schema Browser and Inspector tests take custom issue text from the schema that owns it, and empty capture comparison must name both missing inspection fields. * fix(cli): remove duplicate merged schema import --------- Co-authored-by: Cursor Agent <cursoragent@cursor.com> |
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562779bd71 |
fix(mcp): advertise absolute paths for tools that reject relative inputs (#9179)
* fix(mcp): advertise absolute paths for tools that reject relative inputs The domain schemas accepted relative paths, then handlers rejected them with isAbsolute. Those inputs now use absoluteLocalPathStringSchema, and the duplicate handler checks are gone. * fix(javascript): own recovery path admission in the schema Relative recovery paths now fail in absoluteLocalPathStringSchema, including the additional_paths index. Drop the duplicate handler check, and make the CLI, MCP, and tools/list tests assert that schema fact. * test: assert absolute-path facts instead of error prose Recovery and web-script tests keep the field, format code, and regex expectation. They no longer freeze the schema's explanatory sentence. --------- Co-authored-by: Cursor Agent <cursoragent@cursor.com> |
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99db80a13e | fix(cli): reject non-decimal integer tokens on every numeric option (#9178) | ||
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48f5f30fd5 |
fix(cli): reject malformed dry-run literals before changes (#7870)
Fixes #7540. Retain every raw dryRun literal at the shared inert token binder before Incur boolean coercion; preserve parser-owned values, original execution, defaults and variadics. Return an actionable typed PARSE_ERROR before setup or environment publication. Validated 40 focused tests, independent nine-call compiled-CLI before/after configuration controls, check:fast and docs:check. Full technical CI 42302162266 passes, including all eight shards and required aggregates. Greptile reviews this head at 5/5; no completed Codex review of this head is available. The Author readiness-only exception is explicitly authorized; no human-review attestation is added. Assisted-by: Reimu (gensokyo-skills:reimu-incident-triage) |
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91d537098a | fix(setup): spell IDA and JADX in interactive completion (#9149) | ||
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d1103beb8d | fix(cli): reject non-decimal web capture deadlines (#9167) | ||
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fdd4aefd18 |
fix(cli): preserve literal Bash completion candidates (#9153)
* test(process): align symlink fixture with filesystem checkpoints * test(frida): assert the CLI spawn Evidence contract * test(mcp): use an unsupported analysis-view parent * test(browser): separate source-location line bounds from parity * fix(cli): preserve literal Bash completion candidates |
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9cdcdf3dff | fix(cli): reject non-decimal guidance search limits (#9165) | ||
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fbe7532fab |
fix(managed): surface capacity limits in member comparison
Preserve per-side capacity diagnostics in shared managed member comparisons and apply repeatable CLI type selection to both source inspections. Keep partial and historical unknown semantics intact, with one typed diagnostic projection and side schema. Validated with 159 focused tests, final-main CLI/MCP boundary checks, schema validation and official public WPF 8.0.32/8.0.33 assemblies. Full source Evidence remains available through the retained-record MCP workflow. No target execution or budget increase. Fixes #9021 Assisted-by: Reimu (gensokyo-skills:reimu-incident-triage) |
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1480a7c72e | docs(firmware): qualify component comparison workflows (#9143) | ||
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81f9f71f6d |
feat(rizin): select the decoder and map address for one-shot commands (#8991)
* feat(rizin): select the decoder and map address for one-shot commands execute_rizin_command and rea execute-rizin-command accept optional asm_arch, asm_bits, asm_cpu and base_address (CLI --asm-arch, --asm-bits, --asm-cpu and --base-address). REA passes them to Rizin before the artifact path as -a, -b, -e asm.cpu= and -m. Rizin 0.9.1 refuses -e asm.arch= and -e asm.bits= at startup, while -a and -b work in 0.7.4 and 0.9.1. Rizin applies -e settings after -a and -b. base_address is the address of file offset 0, as in REA's raw-binary inputs. REA checks only the spelling, because Rizin owns the arch and CPU vocabulary and its builds differ. The Homebrew build of Rizin 0.9.1 has no xtensa or riscv plugin; the official static Linux build of 0.7.4 has both. Evidence records each input and the complete argument list. When any input is set, Evidence also states that REA does not confirm the decoder or map that Rizin used: Rizin uses another value for one it cannot apply and exits 0. Rizin 0.9.1 keeps its default and reports the value on stderr, and Rizin 0.7.4 turned -b 8 for arm into 16 without a message. Calls without these inputs keep their argument list and Evidence. The real-provider gate tests/boundary/providers/RizinDecoderInputs.test.ts checks the effect of each flag through MCP with Rizin's own e asm.*, omlj and byte reads. It skips when no Rizin is on PATH. It passes with Rizin 0.9.1 (Homebrew, macOS arm64) and 0.7.4 (official static build, Linux x86_64). * docs(rizin): map multi-segment ESP32 images with om An ESP32-family app or bootloader image holds several segments, each loaded at its own address, so one base_address cannot map it. The recipe removes the default map with om-* and adds one om map per segment, using the segment offsets from the image format or from esptool image-info. It does not depend on an ESP image reader in REA. The offsets were checked against esptool 4.12.0 image_info on a synthetic two-segment ESP32 image. Rizin 0.9.1 and 0.7.4 mapped its segments at their load addresses. Rizin 0.7.4, whose static Linux build has the xtensa plugin, decoded the IRAM segment as nop.n, nop.n, ret.n and nop.n. * fix(rizin): read the file at base_address when a loader would claim it On Rizin 0.9.1, base_address could read 0xff at the mapped address with exit 0. -m maps the file, but Rizin still runs its format loaders, and a loose one can claim a raw image. Rizin 0.9.1's AVR loader matches when bytes 1 and 3 look like rjmp and turns io.va off, so reads use file offsets. The BIOS loader, in 0.7.4 and 0.9.1, matches a 64 KiB file with a jmp 16 bytes from its end and maps it at another address. An acceptance run on a raw ESP32-S3 segment hit the first case. With base_address, REA now passes -n together with -m. Rizin then skips the loaders and maps the whole file at the address: rizin.c calls rz_io_map_new at the -m address and leaves io.va at its default. The input therefore means a raw image, and Rizin loads no sections, symbols or entry point, even from an ELF file. Evidence states this in its own limitation, and the decoder limitation no longer covers the map. The real-provider gate adds an AVR-like and a BIOS-like image and reads below the base, at it, at the end of the image and past it. Without -n it fails on Rizin 0.9.1. It passes with Rizin 0.9.1 (Homebrew, macOS arm64) and 0.7.4 (official static build, Linux x86_64). The ESP om recipe now starts with e io.va=true, because reads use the maps only while io.va is on. * fix(rizin): advertise name patterns that compile in v mode The asm_arch and asm_cpu pattern ended its character class with an unescaped '-', which JavaScript's v (unicodeSets) mode rejects, so clients compiling advertised patterns in that mode could not use execute_rizin_command's schema. Escaping it keeps the same names valid in every mode, as main's own patterns write it. * fix(rizin): state what the decoder and map inputs leave unconfirmed The base_address limitation reported a map REA never observes and left out that -n keeps Rizin's default arch, bits and byte order. The asm_* limitation implied Rizin replaces a bad CPU, but e asm.cpu echoes any value. Compact schemas drop property descriptions, so the tool description now carries the raw-loading warning. The real-provider gate checks that asm_cpu changes a decode, and a base_address-only call. * docs(rizin): record the gate's full run on Rizin 0.7.4 * test(rizin): follow the test guide in the decoder input tests Focused tests resolve execute_rizin_command from its contract family, the harness owns the temporary directory before setup can fail, and guidance is compared with its owner, not with sentences from it. |
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5303199163 |
feat(api-contract): inspect local GraphQL SDL and field references (#9140)
* feat(api-contract): inspect local GraphQL SDL and field references * fix(api-contract): retain caller metadata and bound selection work |
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985b9eae96 |
feat(browser): import saved Playwright v10 trace evidence (#9127)
* feat(browser): import saved Playwright v10 trace evidence * fix(browser): preserve original Playwright ZIP member names |
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996977edf2 |
feat(cli): expose caller-selected reference-source path exclusions (#2630)
* feat(cli): expose caller-selected reference-source path exclusions Let import-reference-source accept a JSON array of Git-ignore rules and pass them to the existing importer before the source tree is opened. Fixes #2443 * docs(cli): use an effective reference exclusion negation * test(cli): expect entry_kind on reference-source exclusions Main records entry_kind on every historical source exclusion. The caller exclusion assertions still compared objects without that field, so the pruning test failed after merging main. Co-authored-by: Yunzhou Li <YunzhouLi-hub@users.noreply.github.com> * test(cli): record caller *.tmp over project ignore Caller exclusions are mandatory and override project rules, so project.tmp matched by *.tmp is caller-excluded. Align the pruning assertion with that result from the merged importer. --------- Co-authored-by: morluto <76467478+morluto@users.noreply.github.com> Co-authored-by: REA Maintenance <rea-maintenance@users.noreply.github.com> Co-authored-by: Cursor Agent <cursoragent@cursor.com> Co-authored-by: Yunzhou Li <YunzhouLi-hub@users.noreply.github.com> |
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f1bfa1cba2 |
fix(cli): honor the selected format for unknown mcp subcommands (#7802)
* fix(cli): honor the selected format for unknown mcp subcommands Incur 0.6.1 renders its unknown mcp subcommand rejection as TOON regardless of --format or --json. Report the same COMMAND_NOT_FOUND envelope in the explicitly selected format before dispatching to Incur, share the pinned mcp subcommand table with completions, and redact explicitly declared sensitive values from the diagnostic. Fixes #7691 * fix(cli): correct only the subcommand in the mcp suggestion The suggested command replaced every token equal to the unknown subcommand, including option values such as --command. Record each command token's argument position in the shared builtin split and replace only the subcommand position. * fix(cli): leave earlier Incur builtins and caller output flags intact Incur serves --llms, --llms-full and its update check before the mcp subcommand branch, so defer those invocations to Incur as well. Build the suggested command from the caller's arguments rather than the arguments adapted for Incur, so a delimited format and its columns remain in the suggestion. * fix(cli): ignore output values spelled like earlier Incur builtins The earlier-builtin check matched raw tokens, so an output flag value such as --columns --llms or --filter-output --llms deferred the rejection to Incur's TOON path. Check the arguments Incur receives and skip positions its builtin pass consumes as output values. * fix(cli): omit mcp suggestions that would not replay caller input Joining the corrected tokens with spaces re-tokenizes a value with whitespace or shell metacharacters when the suggestion is copied, and quoting differs between POSIX shells, cmd and PowerShell. Offer the corrected command only when every token is a plain shell word and no declared sensitive value was redacted; the message still names the suggested subcommand. * fix(cli): preserve safe MCP diagnostic output * fix(cli): omit mcp suggestions with words zsh expands zsh expands a word that starts with = to an executable path by default, so a copied suggestion such as --command =node would replace the caller's literal value. Treat =-leading words as non-replayable. * fix(cli): render mcp diagnostics through the document renderer Markdown output went through Incur's formatter, so caller text such as *oops* rendered as emphasis instead of literal text. Use REA's document renderer for every format, and redact declared sensitive literals from the fixed call-to-action strings as well as the message. * test(cli): keep the mcp correction on the subcommand after timing globals --------- Co-authored-by: morluto <76467478+morluto@users.noreply.github.com> |
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91d73a113e |
feat(contracts): inventory offline OpenAPI operation declarations (#9104)
* feat(contracts): inventory offline OpenAPI operation declarations * docs(contracts): link fixture provenance outside the docs site * fix(contracts): describe the shared API document byte allowance * fix(api-contract): preserve safe diagnostics and completed source facts |
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42aaef8bdb |
fix(cli): require absolute ADB device paths for file pull and push (#9048)
pull-adb-file and push-adb-file declared device-path as any non-empty string. The CLI schema advertised a relative path as valid, and the service then refused it under the MCP field name. Reuse the shared device_path fields, and keep the regex constraint in CLI field errors as list-adb-directory does. |
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08bc52104a |
fix(cli): preserve Unicode edge whitespace in Markdown tables (#8915)
* fix(cli): preserve Unicode edge whitespace in Markdown tables * fix(cli): bound Markdown whitespace encoding to linear time --------- Co-authored-by: gongfpp <22683417+gongfpp@users.noreply.github.com> |
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6430f395a8 |
fix(cli): reject non-decimal pyc and BEAM limit options (#9060)
inspect-python-pyc and inspect-erlang-beam took their max-* limits through Number(), so 0x10 meant 16 and 1e2 meant 100. Admit decimal text only through cliDecimalField, which now keeps the shared field's description for help. |
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d3a4fc87cd |
fix(cli): stop completion after the option terminator (#9064)
* test(process): align symlink fixture with filesystem checkpoints * test(frida): assert the CLI spawn Evidence contract * test(mcp): use an unsupported analysis-view parent * test(browser): separate source-location line bounds from parity * fix(cli): stop completion after the option terminator |
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a74ce4512c |
fix(cli): reject non-decimal desktop application limits (#9061)
inspect-desktop-application took --max_entries and --max_probe_bytes through Number(), so 0x1 examined one entry and 1e1 ten. Admit decimal text only and keep the shared fields' bounds and defaults. |
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415ddb74c0 |
fix(cli): publish the GPU inventory digest format in the CLI schema (#9062)
inspect-gpu-code-objects declared --expected_sha256 as any string. The CLI schema accepted an upper-case digest, as PowerShell's Get-FileHash prints it, and the command then refused it as invalid_request. Reuse the shared lowercase SHA-256 field so argument parsing refuses it with the CLI field name. |
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3708538e85 |
feat(javascript): compare static endpoints with HAR captures (#9090)
* feat(javascript): compare static endpoints with HAR captures * test(javascript): preserve original HAR fixture bytes during formatting * test(javascript): load the byte-preserved HAR fixture |
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f1212b9e4e | fix(cli): reject non-decimal native UI and command deadline options (#8920) | ||
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c363f3e27b |
feat(desktop): pick seed and end by checkpoint, and keep the capture host out of bundles (#9037)
* feat(desktop): capture a Linux desktop application in use Add `capture-desktop-application`, a CLI-only, Linux and X11 capture that launches an installed desktop application, watches it while it is used and writes capture Evidence plus SHA-256 addressed content: - inventory: desktop entry, launch command, executable, package and its apt sources (or snap, flatpak, AppImage), Electron markers and candidate state directories; - session: the launched process tree, client windows from xprop with the first application window time and a window match, and files held open; - state: a stat walk of the home directory before launch, at checkpoints read from stdin, at stop and after exit, with created, modified, deleted and retyped paths and the content of changed files and state directories. It refuses non-Linux hosts, missing DISPLAY or xprop, a non-empty output folder and an application whose window is already open, and signals only processes it started. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): own launched processes, confirm walk coverage and keep cancelled captures - Launch through the owned provider path with a run token; release with SIGTERM, then the token-verified group cleanup, after every session. Processes without the token are never signalled; each records whether it carries it, and the session records whether cleanup was verified. - Report creations and deletions only where a walk listed the nearest existing directory; count the rest as unconfirmed. - Retain a file only when it is still the walked version, through owned no-follow reads; charge the budget only for new content; create files exclusively in a private output folder owned by the caller. - Walk content roots outside the home directory, compare paths in their physical spelling, and run executables from the caller's directory. - Refuse when the window list cannot be read, re-evaluate window ownership each sample, handle one queued request per sample with a bounded stdin queue, and write the capture with end reason `cancelled` on interruption. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep owned cleanup failures and fresh digests - Allow a capture cancelled before any requested checkpoint to hold only the baseline. - Retry an incomplete stop once; if cleanup is still unverified, write the capture and fail with the run token and process group as cleanup resources. - Classify path changes after a walk (ENOTDIR and other selected-file errors) as changed_since_walk instead of failing the capture. - Treat a non-directory ancestor as proof that nothing existed beneath it. - Report a before digest only for the file version it was read from. - Derive stderr_truncated from stderr's own byte counts. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * wip(desktop): state view over a capture folder Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep failed file-handle closes owned for retry Content reads pass retainFailedClose, so a handle whose close fails stays owned by the content store; the capture retries those closes after it is written and fails with the output folder as the cleanup resource if one still cannot be closed. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): read a captured application's state Add inspect-desktop-application-state, a CLI command that reads a capture folder into the application's state: every retained or changed file with its role and reasons, a typed JSON view of each version (SQLite through the shared worker, dconf through a private dconf dump, JSON, XML, key files, text) and the kinds of change between versions (lines, values, keys, rows). Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): report process and handle cleanup failures together When both the launched processes and a retained file's handle remain unresolved after the capture is written, one cleanup error now lists both reasons and both resource sets. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): export a captured application as an agentenv computer app Add export-desktop-application, which writes an agentenv bundle with one computer_app environment from a capture folder and its state view: the apt package, a boot launch matched on the captured window class with a window ready check, owned paths from the state roles, a seed of the baseline files, data hooks that call agentenv's add/get/reset helpers with a typed JSON view on get, a skill, a README and a deploy smoke task. The desktop CLI commands now load their services lazily. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep state views faithful to the capture - Read key files, XML attributes, dconf groups and SQLite tables into dictionaries without inherited properties, so captured keys such as __proto__ stay data. - Version databases with their write-ahead log as of each checkpoint, and stage only digest-verified bytes for the SQLite and dconf readers. - Detect the format per version, report format changes, keep JSON null and empty containers as values, keep XML text and preserved whitespace, and mark truncated views (including XML depth) and comparisons of them. - Number versions and changes by checkpoint index, decide baseline presence from the captured type, and keep tagged SQLite integers, text bytes and blobs distinct. - Carry the capture's limitations and omitted content forward, match state directories by their home path, index changes once per capture, keep failed handle closes owned, and finish the CLI through the shared owner. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep coverage, logs and handles honest in the state view - Read coverage flags only from formats whose readers write them, so JSON fields named truncated stay data. - Fail a SQLite version whose write-ahead log existed but was not retained or does not match its digest, instead of reading the database alone. - Close retained content on every exit, including cancellation, and report a close that still fails together with the primary failure. - Finish the CLI with the canonical operation name. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): export only what the computer can install and seed - Refuse packages not from the Ubuntu 24.04 archive, since the computer installs by name from that archive. - Start the launch command in the captured working directory. - Respell the home path only in files the state view read as text. - Report files that were not retained instead of dropping them silently. - Load captured dconf keys for apps that own no files. - Keep home-level files as owned paths; rename reserved Python class names. - Mark truncated SQLite and text views in the class's get view, and read file types the way the state view does. - Release the output tree through a resource scope, and read seeds through an owner closed on every exit. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep staged folders owned, symlinked state roots and XML values - Stage database bytes in a private runtime root released through a resource scope, so a failed removal keeps its owner and is reported with the read's outcome. - Report cleanup facts and owners from desktop failures instead of wrapping them as a plain adapter error. - Record the state directories as walked, in their physical spelling, and match roles against both spellings, so files in a symlinked state directory are not mistaken for selected documents. - Keep whitespace-only XML leaf values; drop only formatting between elements. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): read XML in the exported app the way the state view does Keep whitespace-only leaf values and xml:space="preserve" text in the generated get view; drop only formatting between elements. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): release retained handles with their owners, read older captures - Release retained-content handles whose close failed through a resource scope on every exit; a release that fails again reports the exact handle owners. A read that finished keeps its bytes when only its close failed. - Accept captures written before state directories were recorded, and say in the state view's limitations that symlinked state directories may be misclassed for them. - Compute each XML element's whitespace context once instead of scanning siblings for every text run. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): boot without the working folder, bound XML, accept mirrors - Try the captured working directory only when an argument is relative, and start the app even when that folder is missing. - Cut the generated XML view at REA's node and depth limits, and keep one unreadable file from failing data/get. - Accept Ubuntu 24.04 mirrors, not only the canonical hosts; PPAs and other repositories are still refused. - Read seeds through the retained-content owner's new signature. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): state view review round - Stage a retained -journal beside its database so the SQLite worker accepts an inactive journal and refuses a hot one; a -wal or -journal that existed but was not retained (including one omitted at the baseline) makes the version unreadable. - Keep tables that read when another fails, and let cancellation and unfinished cleanup propagate instead of becoming view errors. - Read text as a key file only when every line parses as one. - Rank a file named in a window title or selected by the caller as a document even when the application holds it open; match titles on file-name boundaries; leave the display name out of dconf matching. - Bound JSON and key file views (4 MiB, 500 levels, exact numbers) and report too-large, missing and altered retained content separately. - Add no version or change while a database stays absent. - Read staged databases in place instead of copying them again. - Give Evidence the same limitations as the result. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): export review round - Load captured dconf keys without D-Bus: install dconf-cli, compile the existing and captured key files into the user database, and warn on failure instead of stopping the server. - Start relative-argument launches in the captured working directory, the home included, since the framework launches from the app folder; respell the home itself and option values under it. - Read views in a thread, skip files over 64 MiB, align the generated readers with the state view's, and close SQLite connections. - Never own the home or a shared base folder; map a symlinked state directory's files back to their home spelling. - Report omitted files and unretained opened folders. - Name the module so it cannot shadow another, and keep the class off the module's own names; derive names the bundle check accepts. - Write seeds as they are read, and remove an unpublished bundle on failure. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): capture review round - Ask the launch process group and token carriers to exit before killing them, on errors too; report incomplete cleanup with its facts. - Count descendants of the launch as started by the capture even when their environment cannot be read; treat a reused pid as a new process. - Follow symlinked desktop entries; name a flatpak's state after its application id; match flatpak windows by name only. - Stop on end of input; refuse empty, duplicate and reserved checkpoint names; require whitespace after the checkpoint keyword. - Stay on each walk root's device, and never walk or retain `/` or a directory containing the home; say so in the limitations. - Refuse a window manager that does not publish _NET_CLIENT_LIST. - Remove retained content when a capture fails before it is written. - Skip reading a file larger than the remaining content budget. - Record apt's archive origin for each package source. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): read an unset client list as no windows when supported xfwm4 leaves _NET_CLIENT_LIST unset while it manages no windows, so the capture refused an ordinary desktop with nothing open. Read _NET_SUPPORTED with the list: an unset list means no windows when the window manager supports it, and the capture is refused only when it does not. `xprop`'s "no such atom" output now reads as unset too. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): accept packages by apt's archive origin Accept a package source when apt reports its origin as Ubuntu for a noble suite, so mirrors count and PPAs or other repositories that merely have "ubuntu" in their URL do not. Captures made before origins were recorded fall back to Canonical's own archive hosts. Seed reads report why retained content could not be used. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): capture and export apps from vendor apt repositories A closed-source app installed from its vendor's apt repository, such as Typora, can now be captured and exported as a computer app. - The capture records each non-Ubuntu repository listing the installed version (uri, suite, components from apt's sources files, one-line or deb822) and the key that signs it: the signed-by key, or the trusted key that gpgv shows verifies the repository's signed index. The key is retained with the capture. - The capture records the packages owning the libraries the executable loads (DT_NEEDED with RUNPATH and the linker cache, through REA's ELF readers), since a vendor package may not depend on them. - The export declares a verified vendor repository as an AptSource with its key, installs a vendor package's library packages, and adds --no-sandbox to an Electron app's launch, since a container denies Chromium's sandbox. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): report a locked database at once in data/get A database the running app holds locked made each data/get wait sqlite's five-second busy timeout before reporting it. Record the Typora run in an agentenv computer in the verification. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * perf(desktop): detect key files without splitting the whole text Read lines one at a time and stop at the first that a key file view would drop, instead of splitting a file of up to 64 MiB into arrays before its format is known. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep symlinked homes and state folders under the home in exports - Respell a path under its state folder's logical spelling only when that spelling is under the captured home, so a symlinked HOME keeps its files; pair walked and logical state folders only when the capture lists the same number, and match the innermost folder first. - When two files map to one home path, keep the one present before the capture and name the other in the limitations. - Read key files in the generated data/get with the state view's rule, checked against it by running the helper under python3. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): end captures on zombies and keep cleanup owners - A zombie or dead process no longer keeps the session open. - Remove only the partial capture file this run created. - Keep the exact owners of handles and processes whose cleanup failed on the returned error, so a retry can release them; test the published capture's cleanup-failure branch with mixed outcomes and retries. - Release the application once even when the exit checkpoint fails. - A cancellation before the capture is written removes what it retained. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): vendor package review round - Match apt sources through `apt-get indextargets`, which covers flat `./` and `/` suites and gives each release file and sources entry. - Accept a key whose signature verifies even when the release carries another signature without a key here; keep only the verifying key from a keyring holding several (OpenPGP packet splitter). - Install the package from its repository's release (`name/<release>`), declare one source per URI and suite, support only the capture host's architecture, and refuse Ubuntu Pro repositories. - List only library packages the computer can install; walk libraries only for vendor installs, with RPATH inherited as ld.so does, normalized paths, and DT_NEEDED bounded while reading. - Put --no-sandbox after the program an env wrapper launches; keep the gpgv folder's owner when its removal fails; respect --max-file-bytes for keys; wait 0.25 s on a busy SQLite database in data/get. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): keep the vendor spec's gpgv command on one line A code span broken across lines left `<binary keyring>` for VitePress to read as an unclosed HTML tag, so the docs build failed. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): add a validated task to exported desktop applications Each capture can now yield one agentenv task in its exported bundle. An agent writes the task (a prompt plus declarative checks over the app's data/get views); REA validates it and stays model-free. - `describe-desktop-application-task` summarises a capture's net change per file (role, format, views before and after) and drafts checks. - Checks: file presence, lines present/absent/counted, JSON-pointer values, SQLite rows and counts. REA keeps a task only if a check fails on the seed and every check passes on the captured end state; a file that was not retained at the baseline counts as absent, as the computer starts. - `export-desktop-application --task` writes tasks/NAME.json (deploy, agent, skills, recording, prompt, verifier), a compiled verify.py that reads data/get, and an eval. A boundary test runs the verifier under python3 and checks it agrees with REA's evaluator on every check kind. - Docs, spec and skill guidance, with the solve-rate recipe. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * test(desktop): keep the seed test in its own block Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): record the task verifier driven in an agentenv computer Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): record the Typora task run in an agentenv computer Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep task checks bounded, complete and attributable - line_count counts lines holding a substring (contains) instead of matching a regular expression, which could stall the verifier on agent-written text and read differently in Python. - value_equals of a whole object or array is undecided on a truncated view. - The draft keeps a database whose rows changed under an unchanged hash, and a file whose truncated views match while it changed. - A task file that cannot be read keeps the reader's detail, and a failed cleanup keeps the read failure as its primary. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): leave a file with one version out of the task draft Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): update the task verification's test counts Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): record the task solve rate with Claude Code and Sonnet 5.5 Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): capture and export apps installed from a downloaded .deb capture-desktop-application --package-file reads the file's control fields with dpkg-deb and records its SHA-256, size and dependencies when it holds the installed package; the file itself is never kept. The library walk now also runs for local installs. export-desktop-application --package-url declares agentenv's Download(url, sha256) for that file, its dependencies and library packages as apt packages, and a run script that installs it with dpkg. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): seed app-named dotfiles and respell UTF-16 seeds The capture now treats dotfiles in the home named after the application (.varicad-cfg.ini, .notesrc) as state roots, so a file the app only reads during the capture is still seeded. The exported seeding respells the captured home in UTF-16 text files with a byte-order mark, keeping the mark. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): hold readiness until the app's own window shows An exported app is ready only once a window of its class that the taskbar lists is shown, so a splash screen of the class, which skips the taskbar, no longer counts as the app being up. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): record VariCAD captured, exported and run in an agentenv computer Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep exported views strict JSON for infinite and inexact numbers The exported data/get spells infinite and negative-zero SQLite reals as REA's SQLite reader does ("Infinity", "-Infinity", "-0"), and refuses a JSON file holding a number that reading would change (1e999, integers past 2^53, -0, rounded fractions) with the state view's own error, instead of a view with an infinity in it. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep package-file facts tied to one file and URLs unechoed - A --package-url refusal never repeats the URL, and credentials are checked before the scheme. - The package file's identity must hold between dpkg-deb's read and the hash. - A failed close keeps its cleanup owner even when the capture is cancelled. - Readiness also ignores windows typed as splash screens. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): record database logs and keep state changes distinct - A selected path that is not a directory brings its -wal and -journal as content roots, so the capture records whether they exist and retains them. - The state view treats a file as absent only under recorded content roots and refuses a database whose log presence is unknown. - JSON changes list containers too, so an array that becomes an object with the same members is a change. - Key file entries escape the key as a JSON pointer segment, so [a/b] c and [a] b/c stay apart. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep watching through unread samples and late workers - An unreadable window list is unknown, not zero windows, and is named in the limitations. - Before ending the session, live run-token carriers no parent link reached are tracked; an unreadable process table leaves the exit unknown. - An env prefix's assignments find the program and name its XDG folders. - flatpak run options that take a value are skipped with it, -- is honoured and a /arch/branch suffix is dropped from the id. - State directories include the entry's full id. - Path options refuse empty values; roots count toward the entry limit. - A capture file whose close failed stays owned and is retried on discard. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): bound apt sources, keep older captures and cleanup owners - Sources files parse into one stanza per line or deb822 paragraph with its URIs and suites kept as lists, so no URI x suite product is built. - Repository architectures and release are optional, so captures written before they were recorded parse; the export treats them as unrestricted and unknown. - Library sources are matched against every index of a declared repository's URI, suite and components. - Two failures side by side keep both causes and both cleanup owners, and a host file whose close fails reports a lease on its handle. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): match escaped key file entries and suggest containers through members - The draft's key file lookup uses the state view's escaped `group/key`, so a key holding `/` or `~` still gets its suggestion. - JSON and XML changes now list containers too; the draft suggests an added or removed container through its listed members, and a container only when none of its members is listed. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): read relative PATH entries from the launch folder A program, or an empty or relative PATH entry, is resolved from the folder the program starts in, as the launch does, so `env PATH=. app` with the entry's Path still finds the app. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * perf(desktop): compare JSON views on one shared path JSON and XML changes are found by walking both trees with one shared pointer path, building a pointer only for a listed value, so memory follows depth rather than every container's full path. A pointer over 4096 characters is counted but not listed. A 256-level document with 4000-character keys went from about 251 MiB of heap to under 1 MiB. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep JSON Lines as text in the exported reader The exported reader parses the whole text before an inexact number makes it JSON with an error, so JSON Lines with an integer above 2^53 stay text as in REA. Over-long integer spellings are unsafe without converting them. The guide no longer claims large integers keep their value. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep the state-path help free of dash-led words The CLI alias check reads `-wal` and `-journal` in help text as short flags, so the help names the write-ahead log and rollback journal instead. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): never record or export apt source credentials - Source URIs lose any user name and password as they are parsed, the way apt splits them, and so do index-target URIs and descriptions and the sources apt-cache policy lists, so matching works whether or not apt prints them. - A repository whose entry held credentials is marked `uri_credentials_removed`, and the export refuses it, or an older capture whose URI still holds them, with a reason that names no URL. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): look programs up without normalizing their paths Program paths and PATH entries are joined rather than resolved, so `..` after a symbolic link means what it means to the launch. The lookup moves to its own module. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): note inexact JSON numbers with a flag, not a list The exported reader only needs to know whether any number was inexact, so it keeps a boolean instead of every rejected spelling. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): refuse older captures that still hold apt credentials A capture written before credentials were removed counted the credentialed repository's libraries as installable, so the export refuses it whole and asks for a new capture rather than declaring packages no source offers. Recorded policy sources are redacted in export messages too. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * test(desktop): keep the credential fixture on an example host A login on a real host reads as a secret to the commit scanner, so the older capture's fixture uses apt.example.com like the other credential tests. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): tidy looked-up paths and search relative entries only for env Empty and `.` segments are dropped from a looked-up program path, which keeps `/snap/bin/` entries recognisable as snaps, while `..` is still left for the kernel. Relative and empty PATH entries are searched only in the PATH an `env` prefix sets, which travels with the exported launch; the host's own PATH does not. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep excluded and unwalked database logs unknown The capture records the paths every walk left out, and the state view treats a log as absent only under content roots the baseline walked completely and outside those exclusions, so an excluded or unvisited log leaves the database unread rather than read without it. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): judge JSON numbers after duplicate keys settle The exported reader marks an inexact number instead of flagging it during the parse, then looks for marks in the parsed value, so a number a later duplicate key overwrote no longer refuses the file, as in REA. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): redact a repository's policy source when it names it An older capture whose policy source matched no sources entry kept that text whole, and the export named the repository by it; the export now names it without any user name or password. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): never signal the launch group on unknown membership When the current read cannot observe a carrier's process group, the carrier is signalled on its own instead of letting an older process-table row grant a group-wide SIGTERM. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): look programs up in the launch's order and refuse host-relative finds The lookup searches PATH as the launch does, an empty entry meaning the launch folder, so inspection and launch name the same program. A program found only through a relative or empty entry of the host's own PATH is refused, since the exported computer would not have it; an env prefix's PATH travels with the command. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): count unchecked paths and keep logs behind them unknown Each walk counts the paths it could not stat and the directories on another device it did not enter, and the checkpoint records it as `unchecked_paths`. The state view treats a log as absent only when the baseline left nothing unchecked, so a log whose stat failed stays unknown. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * perf(desktop): scan parsed JSON with one iterator per level The check for marked numbers walks the parsed value with an iterator per nesting level instead of copying each container's children; a million-entry array went from about 15.7 MiB to 8.1 MiB of peak traced memory. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): start a relative program from its captured folder An exported launch whose program path is relative, such as `./app` from an entry's Path, now changes to the captured working directory first, as it already did for relative arguments. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): read zipped documents and name XML elements in task checks - A file that starts as a zip archive gets a `zip` view listing its entries in archive order, each with its own format and view, within limits on entries, bytes and expansion; the exported Python reader matches it. - A pointer segment applied to an array may be a selector, `[KEY=VALUE]` or `[@KEY=VALUE]` for XML attributes, matching exactly one member, so checks name elements instead of positions that shift between saves and versions. - `value_equals` takes an optional numeric `tolerance`, comparing numbers and numeric strings. - Changes inside zip views are listed by selector, and the task draft suggests name-addressed checks. FreeCAD's `.FCStd` is the first case: a hole cut into a plate is verified from the zipped `Document.xml` on files from both FreeCAD 0.21 and 1.0. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): record the desktop entry's package and app profiles in any case - A launch from a desktop entry records the package that owns the entry, so the export installs the app the entry starts (Writer, not only libreoffice-common); the program's own package is kept as executable_package when it differs. - State folders match the app's names ignoring letter case, as direct children of the XDG folders and the home, so GIMP's ~/.config/GIMP profile is seeded and reset; roles follow the same rule. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): read namespaced XML alike in REA and the exported verifier The exported Python reader now names XML elements and attributes as the document spells them (svg, text:p, sodipodi:docname, xml:space), with namespace declarations kept as attributes, which is what REA's view already produced. Export therefore accepts checks into Inkscape SVGs, LibreOffice content.xml and namespaced XML inside zips, and the draft suggests them. expat replaces ElementTree: one pass with namespace processing refuses what REA's parser refuses, and a streaming pass builds the view within the same node and depth limits. Text splits at CDATA, comments and processing instructions as REA's DOM splits it. Fixtures are real Inkscape 1.2.2 and LibreOffice 24.2 saves. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): install the program's own package and keep unknown owners unknown - When the desktop entry's package does not own the program it runs, the export installs the program's package too. The capture records why it cannot (executable_package_reason), and the export then refuses. - The export owns a state folder in the letter case the app wrote it, as the state roles already did, so data/get and data/reset cover a profile folder the app created during the capture. - A dpkg-query that fails or exits 2 or higher leaves the package unknown instead of reading as "no owner". Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep selector checks undecided on partial views and pair members one to one - A selector check is undecided while an array it searched may be missing members: a cut zip listing, or a truncated XML or entry view. Both evaluators agree. - Diffs pair the members of two versions one to one, so two new elements can no longer both match the same old one and hide an addition. - The task draft descends into JSON values and readable entries added whole, and never suggests an element by its position, last step included. - The export's namespace refusal also checks XML entries inside the value a pointer names, such as the whole listing. - The exported reader keeps REA's 500-level JSON depth limit, so one deep entry no longer hides the rest of the archive, and treats an entry whose data runs past its declared size as damaged. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): check approved packages against the repositories the export keeps The capture approved library packages and the program's package against every repository with a verified key, but the export can still leave a repository out: its key dropped by the content budget, an architecture restriction, or a conflicting key. Each repository now records the packages only it supplies (`supplies`). The export drops stranded library packages with a limitation, and refuses when the program's own package is stranded. Captures without `supplies` behave as before. The install limitations move to appExportInstallLimitations.ts to keep appExportInstall.ts under the line limit. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): compare type changes in place, keep empty values and unread entries honest - When an array becomes another type, its members are compared with what their pointers name there, so values that are still present no longer look removed. - The draft checks an added empty array or object by equality. - The exported reader's JSON depth check keeps one iterator per level and copies no wide list, back to the memory peak before the check. - An entry whose view could not be read is no `null` value: the draft suggests no check on it, and a check into its view fails in both evaluators with the read error. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): decide entry view checks only on entries with a view, and walk JSON depth by level - A check into an archive entry's view needs an entry read in a format with a view. A binary or unread entry's `view` of `null` no longer passes a `null` or absence check, in either evaluator, and the draft suggests no absence inside an entry that ends without a view. - REA's JSON depth check keeps one iterator per level instead of queuing a pair per member, so 800,000 nulls need 18 MiB instead of more than 64. The helper came with the state view; its Python twin was fixed here. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): refuse an export whose desktop entry runs a program no package owns When a package owns the desktop entry but no package owns the program it runs, such as one in ~/.local/bin first on PATH, the capture keeps the entry's package and records why the program cannot be installed. Export refuses instead of installing a package that does not bring that program. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): bound zip entry reads, export metadata checks, and diff by the evaluator's pointer rules - The exported reader inflates a zip entry at most 64 KiB at a time and stops a byte past its declared size, so a forged small size no longer holds the whole stream in memory (77.5 MiB to 0.1 MiB on a 32 KiB bomb). - The namespace refusal applies only to checks that depend on an entry's XML, so checks on an entry's name, size or digest, or on its absence, export. - Diffs find a member's counterpart by the evaluator's pointer rules, so a selector step across a type change no longer reports a present value removed. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): read at most 1,000 zip directory records, and index arrays once per diff - Both zip readers now read the central directory a record at a time, keep the first 1,000 file records and count the rest, then hand the library an archive whose directory holds only those. Directories are told apart as zip.js does, so the Python reader stops listing attribute-marked directories as files. 600,000 entries now peak at 1.3 MiB in Python (was 293.6 MiB) and need 24 MiB of heap in REA. - The exported Python zip reader moves to appExportPythonZip.ts. - Diffs look members up through an index built once per compared array, so 20,000 selector keys against 20,000 members take 31 ms, not 5.4 s. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): pick seed and end by checkpoint, and keep the capture host out of bundles - Export, task export and the task draft take --seed-checkpoint and --end-checkpoint, so one capture can make the seed in the app and then the edit; the defaults stay the baseline and the last version. - Capture reads apt's lists folder and trusted keys from apt-config, so a user-space apt-get update under APT_CONFIG is found, and starts the app without AGENTENV_* variables. - Capture records the host name and user. Export rewrites user@host, the host name as a whole name and the captured home in text, UTF-16 and dconf seeds, ships SEED_HOME=/home/user instead of the capture user's home, lists scrubbed and unscrubbable seeds, and refuses checks that name the host. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): check tasks against the shipped seed and scrub JSON and XML by value - Task validation reads the seed as the bundle ships it, after the scrub, so a task whose end value the scrub writes into the seed is refused. - JSON strings and XML text, attribute values, comments and CDATA are scrubbed as their decoded values and rewritten only when they change, so syntax stays valid and escaped identities are found. - One leftover search covers every shipped file's path and contents, generated module and dconf keys included; the strict whole-name rule is kept for replacing only. - A host named localhost is never replaced, but user@localhost is. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): resolve a record's selector keys together, and follow Zip64 locators without sentinels - The diff resolves all of a record's selector-shaped keys in one lookup: conditions are normalized per field, selectors grouped by field set, and only the values asked for are kept, so retained memory grows with the keys, not members times field sets (68 MB to 5.5 MB, 76 MB to 4.9 MB on the reported cases). - Both zip readers follow a Zip64 locator just before the end record whatever the classic record holds, as zipfile does, so valid Zip64 archives with ordinary classic values read again. The exported module's synthetic tail carries a real Zip64 end record, so bytes that only look like a locator no longer make zipfile refuse it. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): scrub JSON values only, with a scanner whose stack does not grow with string length JSON seeds are walked one string at a time, finding each closing quote with indexOf and a backslash count instead of a backtracking regex, so a 16,000,000-character string no longer overflows the stack. Member names are never rewritten, so two keys cannot collide; a name holding the host leaves the file in unscrubbed_files. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): scrub dconf and UTF-16 seeds by format, search check values for the host, and gate checks on the selected ends - dconf: the host scrub ran over the whole key file, so on a host named `true` `wrap=true` became an invalid `wrap=localhost`. Only decoded GVariant string values are scrubbed now; keys, groups, bytestrings, dictionary keys and object paths ship as captured and are reported. - Task identity: the host search read the serialized check, whose field names (`file`, `kind`) and default ids matched hosts of those names. It now reads the check's string values only. - Value checks: the text-file refusal read every recorded version; it now reads only the shipped seed and the end. - UTF-16 seeds: the plain scrubber renamed JSON keys and XML names; the decoded text's format now picks the scrubber, keeping the byte order mark. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): pair members by identity first, build selectors lazily, and refuse oversized and deep text before building a view - Pairing: an element with an identifier (name, id, xid, *:id) pairs only by it, so an unchanged id still names an edited element instead of a removal and an addition, and two objects of one type are never paired as a rename. Selectors keep the tag apart from each attribute condition and spell only the chosen one, so a long tag with many attributes no longer multiplies. - Size: REA's detection and the exported reader decide JSON with a scanner that builds no value, and refuse a view over the parsed-view limit before building it, in files and zip entries alike. - Deep text: the exported reader confirms the whole text is JSON before reporting a nesting depth error, as REA reads it. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): count a selector's matches over every sibling while identified elements choose only their identifiers Identity-first pairing also dropped an identified sibling's other attributes from the counts that prove a selector names one member, so a shared attribute such as `color` or `fill` could be chosen though it matched two siblings: the diff reported present elements removed and drafts lost their checks. Counting now covers every attribute of every sibling; only the choice is limited to an identified element's tag and identifiers. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): tell a UTF-16 seed's format without building it, and scrub XML without one piece per token Choosing the scrubber for a decoded UTF-16 seed ran the full state detection, which built the whole XML document (or JSON value), so a large seed within the capture limit could exhaust memory at export. A syntax pass now decides the format (the JSON token scan, and the XML parser's events keeping only the open elements), and the XML scrubber copies out only the spans it changes. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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ad518cff65 |
feat(artifacts): select extraction entries and output destination (#4031)
* feat(artifacts): select extraction entries and output destination Refs morluto/rea#3490 * fix(artifacts): omit absent selection from execution parameters * fix(artifacts): protect source directories and verify public selection * fix(artifacts): keep optional selection inputs JSON-safe * fix(artifacts): separate reader ownership from selected destinations Validate complete reader inventory independently from collisions among selected output entries. Use occurrence-parent ownership instead of filename prefixes so independently owned PyInstaller entries remain selectable while nested-reader members remain refused. Validate advertised MCP schemas through the shared acceptance helper and add real PyInstaller/ASAR and excluded-entry regressions. * fix(artifacts): advertise absolute extraction destinations Reuse the shared host-absolute local path schema instead of an opaque refinement so SDK-converted JSON Schema preserves the runtime constraint. Extend the advertised-path and MCP-handler regression matrix for extract_artifact.output_root. * fix(contracts): advertise unique extraction occurrence IDs --------- Co-authored-by: gensokyo-dev <gensokyo-dev@users.noreply.github.com> |
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f76be69428 |
fix(cli): reject non-decimal byte-entropy window options (#8919)
* fix(cli): reject non-decimal byte-entropy window options * fix(cli): admit artifact numeric options as decimals Keyed-archive offset and limit, asset-catalog paging, and interface-builder budgets use the same decimal token check as byte-entropy windows. Defaulted fields stay numbers. --------- Co-authored-by: Cursor Agent <cursoragent@cursor.com> Co-authored-by: morluto <76467478+morluto@users.noreply.github.com> |
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560674e2de |
feat(native): report binary hardening for ELF, PE and Mach-O (#8524)
* feat(native): report binary hardening for ELF, PE and Mach-O Documents inspect_binary_hardening and its CLI equivalent, including per-property states, supporting evidence, read budgets, and one report per Mach-O slice. Explains that missing protection imports remain unknown, signature presence does not establish validity, and hardened runtime requires inspect_signature. Adds hardening links throughout the documentation. The supplied diff also removes the advanced CodeQL workflow and configuration, along with snapshot-binding mismatch guidance. * fix(native): validate declared payloads and dynamic tables before hardening rows Run the shared range checks for ELF, read imports from the dynamic tables rather than section metadata, and keep an unresolved symbol count apart from an absent table. Check every Mach-O command before building rows and retain only the offsets the rows need. Make the verifier's readelf output wide, check the emitted format before parsing Mach-O, and place the sources before the libraries in the link. * fix(native): share Mach-O segment admission with hardening reads A segment with a section count its cmdsize cannot hold passed the hardening reader and could enable restrict_segment. Move the size, section count and file range checks to a shared admission that readMachoImage and the hardening reader both use, and pin the ELF load-size case with a regression test. * fix(hardening): reject Mach-O section payloads past the slice and empty ELF interpreters Segment admission never checked each section's payload range, so a file-backed section past the slice still produced rows. Decode sections with the section header owner and mark the slice malformed when a payload leaves it; zero-fill and empty sections own no file bytes and are exempt. admitInterp accepted a NUL first byte in a longer extent, which counted an empty interpreter as PIE evidence. It now requires a nonempty path. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01KuWHGvzJkrhCqjtEHUwqyH * fix(native): read CFG instrumentation from decoded GuardFlags Use the IMAGE_GUARD_CF_INSTRUMENTED flag that guardFlagRecord already decodes instead of masking the raw GuardFlags word a second time. * fix(native): reject ELF table spans a second PT_LOAD remaps The hardening reader mapped DT_STRTAB, DT_SYMTAB and hash tables through the one PT_LOAD containing the table's first address. A second PT_LOAD starting inside the table could map the rest of it from other file bytes and the reader still reported parsed import evidence. Cap each mapping at the next PT_LOAD that starts inside it, reject a requested range that crosses that boundary, and stop hash reads at the same limit, matching the conflicting-mapping refusal in readElfSymbols. * fix(native): dedupe ELF note tables only on shared boundaries The hardening reader dropped any note table whose bytes another table already covered. A covering SHT_NOTE can hold a non-GNU note whose descriptor is itself a complete GNU property note, while PT_NOTE names that inner note directly. Walking only the outer stream missed the GNU marker and reported CET disabled. Drop an alias only when it starts and ends on boundaries of admitted tables, which are note boundaries of the walked streams. Any other covered alias leaves the feature rows unknown, as a partial overlap already does. * fix(native): admit every Mach-O symbol record after a canary match The Mach-O stack protector scan returned as soon as it found an undefined ___stack_chk_fail, so a later undefined symbol whose n_strx lay outside the string table was never checked. The same damaged table parsed or failed as malformed depending only on record order. Keep the match and finish the bounded record walk. Records after the match are only checked against the string table bounds, so their names are not read or charged to the scan budget. The ELF reader already admits its whole symbol table before matching names. * fix(native): accept ELF load aliases with the same file translation The hardening reader treated every PT_LOAD that starts inside a table, or that also contains the table's address, as a conflicting mapping. A load with the same address-to-file translation names the same file bytes, so tables it overlaps still have one interpretation, and the canonical ElfLoadMap already merges such spans. Treat equivalent loads as one interpretation. A load with a different translation, or the zero-filled tail of an equivalent load, still ends the usable range, so a remapped table is still rejected. * fix(native): keep same-span ELF note tables with different alignments unknown A section and a program header that share endpoints were treated as one note stream even when their effective note alignments differed. Walking the same bytes at 4 and 8 can frame different notes, so dropping the second table could hide a GNU property word and report CET or BTI as disabled. Require matching effective alignment at both endpoints, and no alignment change inside the covered span, before treating a table as an alias. Otherwise mark the feature rows unknown. The fixture's .note.gnu.property section now declares the class's note alignment, as toolchains emit it. * refactor(native): read LC_SYMTAB through the shared fixed-word decoder Move the Mach-O fixed uint32 command layouts out of MachoCommandNames into domain/apple/machoLoadCommands so there is one owner of those offsets. MachoCommandNames and the hardening reader now both decode through it; the hardening reader keeps its own bounds and import policy. * fix(native): skip Mach-O common definitions in canary imports A common definition sets N_UNDF|N_EXT like an import but stores its allocation size in n_value. An object holding only `int __stack_chk_fail;` therefore reported stack_protector: enabled. Require a zero n_value before an undefined external counts as an import, for both nlist widths. * refactor(native): read linkedit data commands through the shared fixed-word decoder readMachoLinkeditDataCommand reproduced the dataoff/datasize offsets that FIXED_WORD_FIELDS already owns. Take the command and decode through decodeMachoFixedWordFields, as readMachoSymtabCommand does, keeping the truncation and endianness behavior. * fix(native): skip empty SHT_NOTE sections in ELF hardening A zero-sized SHT_NOTE owns no bytes, so the section directory marks it not file-backed and the hardening reader rejected the whole image as malformed, while readElfImage accepted the same bytes. Skip empty note sections before the file-backing check; they have nothing to walk. * fix(scripts): run hardening verifier commands through the shared owner The binary hardening verifier started its probes and compiler drivers with raw spawnSync, which bypassed the src/process/ supervision that AGENTS.md requires. Every launch now goes through createVerifierCommands, and the temporary root is removed only after the owner closes cleanly. * fix(scripts): clean up hardening verifier commands on Ctrl-C SIGINT or SIGTERM ended Node before withVerifierCleanup ran, so detached compiler trees and the temporary root could outlive the verifier. The verifier now turns those signals into an abort that every owned command receives, so cleanup closes the owner and removes the root before exit. * fix(scripts): fail the hardening verifier when a signal lands outside a command Only the owned commands read the interruption signal, so a SIGINT or SIGTERM during the final cleanup or between commands was recorded and then dropped, and the verifier exited 0. After cleanup settles, the verifier now throws the interruption reason. A failure the operation or its cleanup already raised still leaves first and is not replaced. * fix(native): fail Mach-O slices with a malformed encryption command The hardening reader turned every malformed status from the shared encryption reader into an unknown `encrypted` row, so a short LC_ENCRYPTION_INFO_64 or an encrypted range past the slice still left the slice parsed with a full report. Only two conflicting encryption commands stay an unknown row now. Any other encryption defect fails the slice like other structural command failures. * fix(native): ignore STB_LOCAL undefined ELF symbols as imports A local undefined __stack_chk_fail or __memcpy_chk is never resolved against another object, so it does not establish an external import. Skip STB_LOCAL bindings when reading protector signs, and give the fixture's positive symbols STB_GLOBAL binding. --------- Co-authored-by: Matt Van Horn <455140+mvanhorn@users.noreply.github.com> Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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fe677f6cf9 |
fix(rizin): keep debug targets off the debugger command stream (#8647)
* fix(rizin): keep debug targets off the debugger command stream A Rizin debug target inherited Rizin's stdin, which is REA's command stream. Once resumed, a target that reads stdin consumed REA's commands, so close returned cleanup_incomplete and the one-shot CLI hung. Route the target's stdin to the caller-selected TTY alongside stdout and stderr. Before detaching, refuse a target whose stdin is still the command stream, so a Rizin or backend that ignores the key gets a specific, retained failure instead of a resumed target and a timeout. Fixes #8642 Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * test(rizin): keep the stdin test launcher's descriptors under dash The launcher gated its target with `cat "$2" >/dev/null`. dash applies a simple command's redirection to the shell itself until the command returns, so on Ubuntu the waiting shell's fd 1 was /dev/null, and that shell is the target REA reads in /proc. All 8 Linux-gated tests then failed the existing output-descriptor check. macOS /bin/sh is bash, which redirects only in the forked child, so this did not show locally. Gate without any redirection. Production code is unchanged. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * test(rizin): reject unmodeled commands and own cleanup at acquisition Address review of the stdin regression tests. The launcher accepted any unknown line, so the marker that followed could complete it, and assertions only checked that commands were present. An added `dc` or a repeated `olj` still passed. It now records an unknown line and exits, and the tests pin the exact command sequence. Cleanup hung off module state assigned after setup finished, so a failed setup left its directory and terminal child behind. Each resource now registers its own finish hook when acquired, using createTestTempDirectory. Success checks throw the typed error instead of asserting `.ok`, and the refusal probe no longer sits inside a loop and conditional. Production code is unchanged. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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1dc83b160d |
fix(cli): align ADB directory and package query schemas (#8974)
* fix(cli): align ADB directory and package query schemas * fix(cli): preserve ADB selector correction details |
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0686ea60f6 |
fix(cli): parse environment-serve --port and --host like rea mcp --http (#7092)
* fix(cli): parse environment-serve --port and --host like rea mcp --http environment-serve declared --port as a number, so incur coerced the flag text with Number(): an empty --port= bound an ephemeral port instead of failing, and 0x1F90 or 1e3 were reinterpreted. --host accepted whitespace. docs/cli.md says these flags resolve like rea mcp --http, which accepts only decimal port text and a non-empty trimmed host. The flags now use the same rules and are refused before binding. * refactor(cli): reuse the shared MCP listener port and host schemas |
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970969cb53 |
feat(desktop): capture and export apps installed from a downloaded .deb (#8954)
* feat(desktop): capture a Linux desktop application in use Add `capture-desktop-application`, a CLI-only, Linux and X11 capture that launches an installed desktop application, watches it while it is used and writes capture Evidence plus SHA-256 addressed content: - inventory: desktop entry, launch command, executable, package and its apt sources (or snap, flatpak, AppImage), Electron markers and candidate state directories; - session: the launched process tree, client windows from xprop with the first application window time and a window match, and files held open; - state: a stat walk of the home directory before launch, at checkpoints read from stdin, at stop and after exit, with created, modified, deleted and retyped paths and the content of changed files and state directories. It refuses non-Linux hosts, missing DISPLAY or xprop, a non-empty output folder and an application whose window is already open, and signals only processes it started. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): own launched processes, confirm walk coverage and keep cancelled captures - Launch through the owned provider path with a run token; release with SIGTERM, then the token-verified group cleanup, after every session. Processes without the token are never signalled; each records whether it carries it, and the session records whether cleanup was verified. - Report creations and deletions only where a walk listed the nearest existing directory; count the rest as unconfirmed. - Retain a file only when it is still the walked version, through owned no-follow reads; charge the budget only for new content; create files exclusively in a private output folder owned by the caller. - Walk content roots outside the home directory, compare paths in their physical spelling, and run executables from the caller's directory. - Refuse when the window list cannot be read, re-evaluate window ownership each sample, handle one queued request per sample with a bounded stdin queue, and write the capture with end reason `cancelled` on interruption. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep owned cleanup failures and fresh digests - Allow a capture cancelled before any requested checkpoint to hold only the baseline. - Retry an incomplete stop once; if cleanup is still unverified, write the capture and fail with the run token and process group as cleanup resources. - Classify path changes after a walk (ENOTDIR and other selected-file errors) as changed_since_walk instead of failing the capture. - Treat a non-directory ancestor as proof that nothing existed beneath it. - Report a before digest only for the file version it was read from. - Derive stderr_truncated from stderr's own byte counts. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * wip(desktop): state view over a capture folder Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep failed file-handle closes owned for retry Content reads pass retainFailedClose, so a handle whose close fails stays owned by the content store; the capture retries those closes after it is written and fails with the output folder as the cleanup resource if one still cannot be closed. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): read a captured application's state Add inspect-desktop-application-state, a CLI command that reads a capture folder into the application's state: every retained or changed file with its role and reasons, a typed JSON view of each version (SQLite through the shared worker, dconf through a private dconf dump, JSON, XML, key files, text) and the kinds of change between versions (lines, values, keys, rows). Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): report process and handle cleanup failures together When both the launched processes and a retained file's handle remain unresolved after the capture is written, one cleanup error now lists both reasons and both resource sets. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): export a captured application as an agentenv computer app Add export-desktop-application, which writes an agentenv bundle with one computer_app environment from a capture folder and its state view: the apt package, a boot launch matched on the captured window class with a window ready check, owned paths from the state roles, a seed of the baseline files, data hooks that call agentenv's add/get/reset helpers with a typed JSON view on get, a skill, a README and a deploy smoke task. The desktop CLI commands now load their services lazily. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep state views faithful to the capture - Read key files, XML attributes, dconf groups and SQLite tables into dictionaries without inherited properties, so captured keys such as __proto__ stay data. - Version databases with their write-ahead log as of each checkpoint, and stage only digest-verified bytes for the SQLite and dconf readers. - Detect the format per version, report format changes, keep JSON null and empty containers as values, keep XML text and preserved whitespace, and mark truncated views (including XML depth) and comparisons of them. - Number versions and changes by checkpoint index, decide baseline presence from the captured type, and keep tagged SQLite integers, text bytes and blobs distinct. - Carry the capture's limitations and omitted content forward, match state directories by their home path, index changes once per capture, keep failed handle closes owned, and finish the CLI through the shared owner. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep coverage, logs and handles honest in the state view - Read coverage flags only from formats whose readers write them, so JSON fields named truncated stay data. - Fail a SQLite version whose write-ahead log existed but was not retained or does not match its digest, instead of reading the database alone. - Close retained content on every exit, including cancellation, and report a close that still fails together with the primary failure. - Finish the CLI with the canonical operation name. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): export only what the computer can install and seed - Refuse packages not from the Ubuntu 24.04 archive, since the computer installs by name from that archive. - Start the launch command in the captured working directory. - Respell the home path only in files the state view read as text. - Report files that were not retained instead of dropping them silently. - Load captured dconf keys for apps that own no files. - Keep home-level files as owned paths; rename reserved Python class names. - Mark truncated SQLite and text views in the class's get view, and read file types the way the state view does. - Release the output tree through a resource scope, and read seeds through an owner closed on every exit. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep staged folders owned, symlinked state roots and XML values - Stage database bytes in a private runtime root released through a resource scope, so a failed removal keeps its owner and is reported with the read's outcome. - Report cleanup facts and owners from desktop failures instead of wrapping them as a plain adapter error. - Record the state directories as walked, in their physical spelling, and match roles against both spellings, so files in a symlinked state directory are not mistaken for selected documents. - Keep whitespace-only XML leaf values; drop only formatting between elements. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): read XML in the exported app the way the state view does Keep whitespace-only leaf values and xml:space="preserve" text in the generated get view; drop only formatting between elements. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): release retained handles with their owners, read older captures - Release retained-content handles whose close failed through a resource scope on every exit; a release that fails again reports the exact handle owners. A read that finished keeps its bytes when only its close failed. - Accept captures written before state directories were recorded, and say in the state view's limitations that symlinked state directories may be misclassed for them. - Compute each XML element's whitespace context once instead of scanning siblings for every text run. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): boot without the working folder, bound XML, accept mirrors - Try the captured working directory only when an argument is relative, and start the app even when that folder is missing. - Cut the generated XML view at REA's node and depth limits, and keep one unreadable file from failing data/get. - Accept Ubuntu 24.04 mirrors, not only the canonical hosts; PPAs and other repositories are still refused. - Read seeds through the retained-content owner's new signature. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): state view review round - Stage a retained -journal beside its database so the SQLite worker accepts an inactive journal and refuses a hot one; a -wal or -journal that existed but was not retained (including one omitted at the baseline) makes the version unreadable. - Keep tables that read when another fails, and let cancellation and unfinished cleanup propagate instead of becoming view errors. - Read text as a key file only when every line parses as one. - Rank a file named in a window title or selected by the caller as a document even when the application holds it open; match titles on file-name boundaries; leave the display name out of dconf matching. - Bound JSON and key file views (4 MiB, 500 levels, exact numbers) and report too-large, missing and altered retained content separately. - Add no version or change while a database stays absent. - Read staged databases in place instead of copying them again. - Give Evidence the same limitations as the result. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): export review round - Load captured dconf keys without D-Bus: install dconf-cli, compile the existing and captured key files into the user database, and warn on failure instead of stopping the server. - Start relative-argument launches in the captured working directory, the home included, since the framework launches from the app folder; respell the home itself and option values under it. - Read views in a thread, skip files over 64 MiB, align the generated readers with the state view's, and close SQLite connections. - Never own the home or a shared base folder; map a symlinked state directory's files back to their home spelling. - Report omitted files and unretained opened folders. - Name the module so it cannot shadow another, and keep the class off the module's own names; derive names the bundle check accepts. - Write seeds as they are read, and remove an unpublished bundle on failure. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): capture review round - Ask the launch process group and token carriers to exit before killing them, on errors too; report incomplete cleanup with its facts. - Count descendants of the launch as started by the capture even when their environment cannot be read; treat a reused pid as a new process. - Follow symlinked desktop entries; name a flatpak's state after its application id; match flatpak windows by name only. - Stop on end of input; refuse empty, duplicate and reserved checkpoint names; require whitespace after the checkpoint keyword. - Stay on each walk root's device, and never walk or retain `/` or a directory containing the home; say so in the limitations. - Refuse a window manager that does not publish _NET_CLIENT_LIST. - Remove retained content when a capture fails before it is written. - Skip reading a file larger than the remaining content budget. - Record apt's archive origin for each package source. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): read an unset client list as no windows when supported xfwm4 leaves _NET_CLIENT_LIST unset while it manages no windows, so the capture refused an ordinary desktop with nothing open. Read _NET_SUPPORTED with the list: an unset list means no windows when the window manager supports it, and the capture is refused only when it does not. `xprop`'s "no such atom" output now reads as unset too. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): accept packages by apt's archive origin Accept a package source when apt reports its origin as Ubuntu for a noble suite, so mirrors count and PPAs or other repositories that merely have "ubuntu" in their URL do not. Captures made before origins were recorded fall back to Canonical's own archive hosts. Seed reads report why retained content could not be used. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): capture and export apps from vendor apt repositories A closed-source app installed from its vendor's apt repository, such as Typora, can now be captured and exported as a computer app. - The capture records each non-Ubuntu repository listing the installed version (uri, suite, components from apt's sources files, one-line or deb822) and the key that signs it: the signed-by key, or the trusted key that gpgv shows verifies the repository's signed index. The key is retained with the capture. - The capture records the packages owning the libraries the executable loads (DT_NEEDED with RUNPATH and the linker cache, through REA's ELF readers), since a vendor package may not depend on them. - The export declares a verified vendor repository as an AptSource with its key, installs a vendor package's library packages, and adds --no-sandbox to an Electron app's launch, since a container denies Chromium's sandbox. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): report a locked database at once in data/get A database the running app holds locked made each data/get wait sqlite's five-second busy timeout before reporting it. Record the Typora run in an agentenv computer in the verification. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * perf(desktop): detect key files without splitting the whole text Read lines one at a time and stop at the first that a key file view would drop, instead of splitting a file of up to 64 MiB into arrays before its format is known. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep symlinked homes and state folders under the home in exports - Respell a path under its state folder's logical spelling only when that spelling is under the captured home, so a symlinked HOME keeps its files; pair walked and logical state folders only when the capture lists the same number, and match the innermost folder first. - When two files map to one home path, keep the one present before the capture and name the other in the limitations. - Read key files in the generated data/get with the state view's rule, checked against it by running the helper under python3. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): end captures on zombies and keep cleanup owners - A zombie or dead process no longer keeps the session open. - Remove only the partial capture file this run created. - Keep the exact owners of handles and processes whose cleanup failed on the returned error, so a retry can release them; test the published capture's cleanup-failure branch with mixed outcomes and retries. - Release the application once even when the exit checkpoint fails. - A cancellation before the capture is written removes what it retained. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): vendor package review round - Match apt sources through `apt-get indextargets`, which covers flat `./` and `/` suites and gives each release file and sources entry. - Accept a key whose signature verifies even when the release carries another signature without a key here; keep only the verifying key from a keyring holding several (OpenPGP packet splitter). - Install the package from its repository's release (`name/<release>`), declare one source per URI and suite, support only the capture host's architecture, and refuse Ubuntu Pro repositories. - List only library packages the computer can install; walk libraries only for vendor installs, with RPATH inherited as ld.so does, normalized paths, and DT_NEEDED bounded while reading. - Put --no-sandbox after the program an env wrapper launches; keep the gpgv folder's owner when its removal fails; respect --max-file-bytes for keys; wait 0.25 s on a busy SQLite database in data/get. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): keep the vendor spec's gpgv command on one line A code span broken across lines left `<binary keyring>` for VitePress to read as an unclosed HTML tag, so the docs build failed. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): add a validated task to exported desktop applications Each capture can now yield one agentenv task in its exported bundle. An agent writes the task (a prompt plus declarative checks over the app's data/get views); REA validates it and stays model-free. - `describe-desktop-application-task` summarises a capture's net change per file (role, format, views before and after) and drafts checks. - Checks: file presence, lines present/absent/counted, JSON-pointer values, SQLite rows and counts. REA keeps a task only if a check fails on the seed and every check passes on the captured end state; a file that was not retained at the baseline counts as absent, as the computer starts. - `export-desktop-application --task` writes tasks/NAME.json (deploy, agent, skills, recording, prompt, verifier), a compiled verify.py that reads data/get, and an eval. A boundary test runs the verifier under python3 and checks it agrees with REA's evaluator on every check kind. - Docs, spec and skill guidance, with the solve-rate recipe. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * test(desktop): keep the seed test in its own block Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): record the task verifier driven in an agentenv computer Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): record the Typora task run in an agentenv computer Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep task checks bounded, complete and attributable - line_count counts lines holding a substring (contains) instead of matching a regular expression, which could stall the verifier on agent-written text and read differently in Python. - value_equals of a whole object or array is undecided on a truncated view. - The draft keeps a database whose rows changed under an unchanged hash, and a file whose truncated views match while it changed. - A task file that cannot be read keeps the reader's detail, and a failed cleanup keeps the read failure as its primary. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): leave a file with one version out of the task draft Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): update the task verification's test counts Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): record the task solve rate with Claude Code and Sonnet 5.5 Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * feat(desktop): capture and export apps installed from a downloaded .deb capture-desktop-application --package-file reads the file's control fields with dpkg-deb and records its SHA-256, size and dependencies when it holds the installed package; the file itself is never kept. The library walk now also runs for local installs. export-desktop-application --package-url declares agentenv's Download(url, sha256) for that file, its dependencies and library packages as apt packages, and a run script that installs it with dpkg. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): seed app-named dotfiles and respell UTF-16 seeds The capture now treats dotfiles in the home named after the application (.varicad-cfg.ini, .notesrc) as state roots, so a file the app only reads during the capture is still seeded. The exported seeding respells the captured home in UTF-16 text files with a byte-order mark, keeping the mark. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): hold readiness until the app's own window shows An exported app is ready only once a window of its class that the taskbar lists is shown, so a splash screen of the class, which skips the taskbar, no longer counts as the app being up. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * docs(desktop): record VariCAD captured, exported and run in an agentenv computer Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep exported views strict JSON for infinite and inexact numbers The exported data/get spells infinite and negative-zero SQLite reals as REA's SQLite reader does ("Infinity", "-Infinity", "-0"), and refuses a JSON file holding a number that reading would change (1e999, integers past 2^53, -0, rounded fractions) with the state view's own error, instead of a view with an infinity in it. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep package-file facts tied to one file and URLs unechoed - A --package-url refusal never repeats the URL, and credentials are checked before the scheme. - The package file's identity must hold between dpkg-deb's read and the hash. - A failed close keeps its cleanup owner even when the capture is cancelled. - Readiness also ignores windows typed as splash screens. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): record database logs and keep state changes distinct - A selected path that is not a directory brings its -wal and -journal as content roots, so the capture records whether they exist and retains them. - The state view treats a file as absent only under recorded content roots and refuses a database whose log presence is unknown. - JSON changes list containers too, so an array that becomes an object with the same members is a change. - Key file entries escape the key as a JSON pointer segment, so [a/b] c and [a] b/c stay apart. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep watching through unread samples and late workers - An unreadable window list is unknown, not zero windows, and is named in the limitations. - Before ending the session, live run-token carriers no parent link reached are tracked; an unreadable process table leaves the exit unknown. - An env prefix's assignments find the program and name its XDG folders. - flatpak run options that take a value are skipped with it, -- is honoured and a /arch/branch suffix is dropped from the id. - State directories include the entry's full id. - Path options refuse empty values; roots count toward the entry limit. - A capture file whose close failed stays owned and is retried on discard. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): bound apt sources, keep older captures and cleanup owners - Sources files parse into one stanza per line or deb822 paragraph with its URIs and suites kept as lists, so no URI x suite product is built. - Repository architectures and release are optional, so captures written before they were recorded parse; the export treats them as unrestricted and unknown. - Library sources are matched against every index of a declared repository's URI, suite and components. - Two failures side by side keep both causes and both cleanup owners, and a host file whose close fails reports a lease on its handle. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): match escaped key file entries and suggest containers through members - The draft's key file lookup uses the state view's escaped `group/key`, so a key holding `/` or `~` still gets its suggestion. - JSON and XML changes now list containers too; the draft suggests an added or removed container through its listed members, and a container only when none of its members is listed. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): read relative PATH entries from the launch folder A program, or an empty or relative PATH entry, is resolved from the folder the program starts in, as the launch does, so `env PATH=. app` with the entry's Path still finds the app. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * perf(desktop): compare JSON views on one shared path JSON and XML changes are found by walking both trees with one shared pointer path, building a pointer only for a listed value, so memory follows depth rather than every container's full path. A pointer over 4096 characters is counted but not listed. A 256-level document with 4000-character keys went from about 251 MiB of heap to under 1 MiB. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep JSON Lines as text in the exported reader The exported reader parses the whole text before an inexact number makes it JSON with an error, so JSON Lines with an integer above 2^53 stay text as in REA. Over-long integer spellings are unsafe without converting them. The guide no longer claims large integers keep their value. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep the state-path help free of dash-led words The CLI alias check reads `-wal` and `-journal` in help text as short flags, so the help names the write-ahead log and rollback journal instead. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): never record or export apt source credentials - Source URIs lose any user name and password as they are parsed, the way apt splits them, and so do index-target URIs and descriptions and the sources apt-cache policy lists, so matching works whether or not apt prints them. - A repository whose entry held credentials is marked `uri_credentials_removed`, and the export refuses it, or an older capture whose URI still holds them, with a reason that names no URL. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): look programs up without normalizing their paths Program paths and PATH entries are joined rather than resolved, so `..` after a symbolic link means what it means to the launch. The lookup moves to its own module. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): note inexact JSON numbers with a flag, not a list The exported reader only needs to know whether any number was inexact, so it keeps a boolean instead of every rejected spelling. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): refuse older captures that still hold apt credentials A capture written before credentials were removed counted the credentialed repository's libraries as installable, so the export refuses it whole and asks for a new capture rather than declaring packages no source offers. Recorded policy sources are redacted in export messages too. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * test(desktop): keep the credential fixture on an example host A login on a real host reads as a secret to the commit scanner, so the older capture's fixture uses apt.example.com like the other credential tests. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): tidy looked-up paths and search relative entries only for env Empty and `.` segments are dropped from a looked-up program path, which keeps `/snap/bin/` entries recognisable as snaps, while `..` is still left for the kernel. Relative and empty PATH entries are searched only in the PATH an `env` prefix sets, which travels with the exported launch; the host's own PATH does not. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): keep excluded and unwalked database logs unknown The capture records the paths every walk left out, and the state view treats a log as absent only under content roots the baseline walked completely and outside those exclusions, so an excluded or unvisited log leaves the database unread rather than read without it. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): judge JSON numbers after duplicate keys settle The exported reader marks an inexact number instead of flagging it during the parse, then looks for marks in the parsed value, so a number a later duplicate key overwrote no longer refuses the file, as in REA. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): redact a repository's policy source when it names it An older capture whose policy source matched no sources entry kept that text whole, and the export named the repository by it; the export now names it without any user name or password. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): never signal the launch group on unknown membership When the current read cannot observe a carrier's process group, the carrier is signalled on its own instead of letting an older process-table row grant a group-wide SIGTERM. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): look programs up in the launch's order and refuse host-relative finds The lookup searches PATH as the launch does, an empty entry meaning the launch folder, so inspection and launch name the same program. A program found only through a relative or empty entry of the host's own PATH is refused, since the exported computer would not have it; an env prefix's PATH travels with the command. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): count unchecked paths and keep logs behind them unknown Each walk counts the paths it could not stat and the directories on another device it did not enter, and the checkpoint records it as `unchecked_paths`. The state view treats a log as absent only when the baseline left nothing unchecked, so a log whose stat failed stays unknown. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * perf(desktop): scan parsed JSON with one iterator per level The check for marked numbers walks the parsed value with an iterator per nesting level instead of copying each container's children; a million-entry array went from about 15.7 MiB to 8.1 MiB of peak traced memory. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> * fix(desktop): start a relative program from its captured folder An exported launch whose program path is relative, such as `./app` from an entry's Path, now changes to the captured working directory first, as it already did for relative arguments. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com> |
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f1622fc8b4 |
feat(native): page retained feature traces (#8585)
* feat(native): page retained feature traces * fix(snapshot): retain linked source evidence for replay * test(snapshot): verify linked foreign evidence stays scoped * docs(mcp): clarify imported residual questions * docs(mcp): guide trace reference classification * fix(cli): report result sources when Evidence publication fails A trace keeps linked sources on the result. Use those records for the undelivered source closure as well as the bundle, so a refused output does not report them as not captured. * ci: rerun pull request checks The merge of origin/main did not start the CI workflow for this head. --------- Co-authored-by: Cursor Agent <cursoragent@cursor.com> |
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78d7bf3ea0 |
docs(native): clarify memory and file byte sources (#8829)
* docs(native): clarify memory and file byte sources * docs(native): qualify Ghidra fixup coverage |
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bd7002b441 |
fix(cli): export source Evidence for native value traces (#8297)
* fix(cli): export source Evidence for native value traces * fix(cli): export source Evidence for native value traces * fix(cli): preserve trace completeness in summaries |