Commit Graph
427 Commits
Author SHA1 Message Date
Kaoru0822andClaude Opus 5.5 fe677f6cf9 fix(rizin): keep debug targets off the debugger command stream (#8647)
* fix(rizin): keep debug targets off the debugger command stream

A Rizin debug target inherited Rizin's stdin, which is REA's command
stream. Once resumed, a target that reads stdin consumed REA's commands,
so close returned cleanup_incomplete and the one-shot CLI hung.

Route the target's stdin to the caller-selected TTY alongside stdout and
stderr. Before detaching, refuse a target whose stdin is still the command
stream, so a Rizin or backend that ignores the key gets a specific,
retained failure instead of a resumed target and a timeout.

Fixes #8642

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(rizin): keep the stdin test launcher's descriptors under dash

The launcher gated its target with `cat "$2" >/dev/null`. dash applies a
simple command's redirection to the shell itself until the command returns,
so on Ubuntu the waiting shell's fd 1 was /dev/null, and that shell is the
target REA reads in /proc. All 8 Linux-gated tests then failed the existing
output-descriptor check. macOS /bin/sh is bash, which redirects only in the
forked child, so this did not show locally.

Gate without any redirection. Production code is unchanged.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(rizin): reject unmodeled commands and own cleanup at acquisition

Address review of the stdin regression tests.

The launcher accepted any unknown line, so the marker that followed could
complete it, and assertions only checked that commands were present. An
added `dc` or a repeated `olj` still passed. It now records an unknown line
and exits, and the tests pin the exact command sequence.

Cleanup hung off module state assigned after setup finished, so a failed
setup left its directory and terminal child behind. Each resource now
registers its own finish hook when acquired, using createTestTempDirectory.

Success checks throw the typed error instead of asserting `.ok`, and the
refusal probe no longer sits inside a loop and conditional.

Production code is unchanged.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-05 18:38:12 +08:00
ShuaixinHuang 1dc83b160d fix(cli): align ADB directory and package query schemas (#8974)
* fix(cli): align ADB directory and package query schemas

* fix(cli): preserve ADB selector correction details
2026-11-05 17:30:06 +08:00
Adolanium 0686ea60f6 fix(cli): parse environment-serve --port and --host like rea mcp --http (#7092)
* fix(cli): parse environment-serve --port and --host like rea mcp --http

environment-serve declared --port as a number, so incur coerced the flag text with Number(): an empty --port= bound an ephemeral port instead of failing, and 0x1F90 or 1e3 were reinterpreted. --host accepted whitespace. docs/cli.md says these flags resolve like rea mcp --http, which accepts only decimal port text and a non-empty trimmed host. The flags now use the same rules and are refused before binding.

* refactor(cli): reuse the shared MCP listener port and host schemas
2026-11-05 15:39:46 +08:00
Edgar ArakelyanandClaude Opus 5.5 970969cb53 feat(desktop): capture and export apps installed from a downloaded .deb (#8954)
* feat(desktop): capture a Linux desktop application in use

Add `capture-desktop-application`, a CLI-only, Linux and X11 capture that
launches an installed desktop application, watches it while it is used and
writes capture Evidence plus SHA-256 addressed content:

- inventory: desktop entry, launch command, executable, package and its
  apt sources (or snap, flatpak, AppImage), Electron markers and candidate
  state directories;
- session: the launched process tree, client windows from xprop with the
  first application window time and a window match, and files held open;
- state: a stat walk of the home directory before launch, at checkpoints
  read from stdin, at stop and after exit, with created, modified, deleted
  and retyped paths and the content of changed files and state directories.

It refuses non-Linux hosts, missing DISPLAY or xprop, a non-empty output
folder and an application whose window is already open, and signals only
processes it started.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): own launched processes, confirm walk coverage and keep cancelled captures

- Launch through the owned provider path with a run token; release with
  SIGTERM, then the token-verified group cleanup, after every session.
  Processes without the token are never signalled; each records whether it
  carries it, and the session records whether cleanup was verified.
- Report creations and deletions only where a walk listed the nearest
  existing directory; count the rest as unconfirmed.
- Retain a file only when it is still the walked version, through owned
  no-follow reads; charge the budget only for new content; create files
  exclusively in a private output folder owned by the caller.
- Walk content roots outside the home directory, compare paths in their
  physical spelling, and run executables from the caller's directory.
- Refuse when the window list cannot be read, re-evaluate window ownership
  each sample, handle one queued request per sample with a bounded stdin
  queue, and write the capture with end reason `cancelled` on interruption.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep owned cleanup failures and fresh digests

- Allow a capture cancelled before any requested checkpoint to hold only the
  baseline.
- Retry an incomplete stop once; if cleanup is still unverified, write the
  capture and fail with the run token and process group as cleanup
  resources.
- Classify path changes after a walk (ENOTDIR and other selected-file
  errors) as changed_since_walk instead of failing the capture.
- Treat a non-directory ancestor as proof that nothing existed beneath it.
- Report a before digest only for the file version it was read from.
- Derive stderr_truncated from stderr's own byte counts.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* wip(desktop): state view over a capture folder

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep failed file-handle closes owned for retry

Content reads pass retainFailedClose, so a handle whose close fails stays
owned by the content store; the capture retries those closes after it is
written and fails with the output folder as the cleanup resource if one
still cannot be closed.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* feat(desktop): read a captured application's state

Add inspect-desktop-application-state, a CLI command that reads a capture
folder into the application's state: every retained or changed file with
its role and reasons, a typed JSON view of each version (SQLite through the
shared worker, dconf through a private dconf dump, JSON, XML, key files,
text) and the kinds of change between versions (lines, values, keys, rows).

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): report process and handle cleanup failures together

When both the launched processes and a retained file's handle remain
unresolved after the capture is written, one cleanup error now lists both
reasons and both resource sets.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* feat(desktop): export a captured application as an agentenv computer app

Add export-desktop-application, which writes an agentenv bundle with one
computer_app environment from a capture folder and its state view: the
apt package, a boot launch matched on the captured window class with a
window ready check, owned paths from the state roles, a seed of the
baseline files, data hooks that call agentenv's add/get/reset helpers
with a typed JSON view on get, a skill, a README and a deploy smoke task.
The desktop CLI commands now load their services lazily.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep state views faithful to the capture

- Read key files, XML attributes, dconf groups and SQLite tables into
  dictionaries without inherited properties, so captured keys such as
  __proto__ stay data.
- Version databases with their write-ahead log as of each checkpoint, and
  stage only digest-verified bytes for the SQLite and dconf readers.
- Detect the format per version, report format changes, keep JSON null and
  empty containers as values, keep XML text and preserved whitespace, and
  mark truncated views (including XML depth) and comparisons of them.
- Number versions and changes by checkpoint index, decide baseline
  presence from the captured type, and keep tagged SQLite integers, text
  bytes and blobs distinct.
- Carry the capture's limitations and omitted content forward, match state
  directories by their home path, index changes once per capture, keep
  failed handle closes owned, and finish the CLI through the shared owner.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep coverage, logs and handles honest in the state view

- Read coverage flags only from formats whose readers write them, so JSON
  fields named truncated stay data.
- Fail a SQLite version whose write-ahead log existed but was not retained
  or does not match its digest, instead of reading the database alone.
- Close retained content on every exit, including cancellation, and report
  a close that still fails together with the primary failure.
- Finish the CLI with the canonical operation name.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): export only what the computer can install and seed

- Refuse packages not from the Ubuntu 24.04 archive, since the computer
  installs by name from that archive.
- Start the launch command in the captured working directory.
- Respell the home path only in files the state view read as text.
- Report files that were not retained instead of dropping them silently.
- Load captured dconf keys for apps that own no files.
- Keep home-level files as owned paths; rename reserved Python class names.
- Mark truncated SQLite and text views in the class's get view, and read
  file types the way the state view does.
- Release the output tree through a resource scope, and read seeds through
  an owner closed on every exit.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep staged folders owned, symlinked state roots and XML values

- Stage database bytes in a private runtime root released through a
  resource scope, so a failed removal keeps its owner and is reported with
  the read's outcome.
- Report cleanup facts and owners from desktop failures instead of
  wrapping them as a plain adapter error.
- Record the state directories as walked, in their physical spelling, and
  match roles against both spellings, so files in a symlinked state
  directory are not mistaken for selected documents.
- Keep whitespace-only XML leaf values; drop only formatting between
  elements.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): read XML in the exported app the way the state view does

Keep whitespace-only leaf values and xml:space="preserve" text in the
generated get view; drop only formatting between elements.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): release retained handles with their owners, read older captures

- Release retained-content handles whose close failed through a resource
  scope on every exit; a release that fails again reports the exact handle
  owners. A read that finished keeps its bytes when only its close failed.
- Accept captures written before state directories were recorded, and say
  in the state view's limitations that symlinked state directories may be
  misclassed for them.
- Compute each XML element's whitespace context once instead of scanning
  siblings for every text run.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): boot without the working folder, bound XML, accept mirrors

- Try the captured working directory only when an argument is relative,
  and start the app even when that folder is missing.
- Cut the generated XML view at REA's node and depth limits, and keep one
  unreadable file from failing data/get.
- Accept Ubuntu 24.04 mirrors, not only the canonical hosts; PPAs and
  other repositories are still refused.
- Read seeds through the retained-content owner's new signature.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): state view review round

- Stage a retained -journal beside its database so the SQLite worker
  accepts an inactive journal and refuses a hot one; a -wal or -journal
  that existed but was not retained (including one omitted at the
  baseline) makes the version unreadable.
- Keep tables that read when another fails, and let cancellation and
  unfinished cleanup propagate instead of becoming view errors.
- Read text as a key file only when every line parses as one.
- Rank a file named in a window title or selected by the caller as a
  document even when the application holds it open; match titles on
  file-name boundaries; leave the display name out of dconf matching.
- Bound JSON and key file views (4 MiB, 500 levels, exact numbers) and
  report too-large, missing and altered retained content separately.
- Add no version or change while a database stays absent.
- Read staged databases in place instead of copying them again.
- Give Evidence the same limitations as the result.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): export review round

- Load captured dconf keys without D-Bus: install dconf-cli, compile the
  existing and captured key files into the user database, and warn on
  failure instead of stopping the server.
- Start relative-argument launches in the captured working directory,
  the home included, since the framework launches from the app folder;
  respell the home itself and option values under it.
- Read views in a thread, skip files over 64 MiB, align the generated
  readers with the state view's, and close SQLite connections.
- Never own the home or a shared base folder; map a symlinked state
  directory's files back to their home spelling.
- Report omitted files and unretained opened folders.
- Name the module so it cannot shadow another, and keep the class off
  the module's own names; derive names the bundle check accepts.
- Write seeds as they are read, and remove an unpublished bundle on
  failure.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): capture review round

- Ask the launch process group and token carriers to exit before
  killing them, on errors too; report incomplete cleanup with its facts.
- Count descendants of the launch as started by the capture even when
  their environment cannot be read; treat a reused pid as a new process.
- Follow symlinked desktop entries; name a flatpak's state after its
  application id; match flatpak windows by name only.
- Stop on end of input; refuse empty, duplicate and reserved checkpoint
  names; require whitespace after the checkpoint keyword.
- Stay on each walk root's device, and never walk or retain `/` or a
  directory containing the home; say so in the limitations.
- Refuse a window manager that does not publish _NET_CLIENT_LIST.
- Remove retained content when a capture fails before it is written.
- Skip reading a file larger than the remaining content budget.
- Record apt's archive origin for each package source.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): read an unset client list as no windows when supported

xfwm4 leaves _NET_CLIENT_LIST unset while it manages no windows, so the
capture refused an ordinary desktop with nothing open. Read
_NET_SUPPORTED with the list: an unset list means no windows when the
window manager supports it, and the capture is refused only when it
does not. `xprop`'s "no such atom" output now reads as unset too.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): accept packages by apt's archive origin

Accept a package source when apt reports its origin as Ubuntu for a
noble suite, so mirrors count and PPAs or other repositories that merely
have "ubuntu" in their URL do not. Captures made before origins were
recorded fall back to Canonical's own archive hosts. Seed reads report
why retained content could not be used.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* feat(desktop): capture and export apps from vendor apt repositories

A closed-source app installed from its vendor's apt repository, such as
Typora, can now be captured and exported as a computer app.

- The capture records each non-Ubuntu repository listing the installed
  version (uri, suite, components from apt's sources files, one-line or
  deb822) and the key that signs it: the signed-by key, or the trusted
  key that gpgv shows verifies the repository's signed index. The key
  is retained with the capture.
- The capture records the packages owning the libraries the executable
  loads (DT_NEEDED with RUNPATH and the linker cache, through REA's ELF
  readers), since a vendor package may not depend on them.
- The export declares a verified vendor repository as an AptSource with
  its key, installs a vendor package's library packages, and adds
  --no-sandbox to an Electron app's launch, since a container denies
  Chromium's sandbox.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): report a locked database at once in data/get

A database the running app holds locked made each data/get wait sqlite's
five-second busy timeout before reporting it. Record the Typora run in an
agentenv computer in the verification.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* perf(desktop): detect key files without splitting the whole text

Read lines one at a time and stop at the first that a key file view
would drop, instead of splitting a file of up to 64 MiB into arrays
before its format is known.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep symlinked homes and state folders under the home in exports

- Respell a path under its state folder's logical spelling only when that
  spelling is under the captured home, so a symlinked HOME keeps its
  files; pair walked and logical state folders only when the capture
  lists the same number, and match the innermost folder first.
- When two files map to one home path, keep the one present before the
  capture and name the other in the limitations.
- Read key files in the generated data/get with the state view's rule,
  checked against it by running the helper under python3.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): end captures on zombies and keep cleanup owners

- A zombie or dead process no longer keeps the session open.
- Remove only the partial capture file this run created.
- Keep the exact owners of handles and processes whose cleanup failed on
  the returned error, so a retry can release them; test the published
  capture's cleanup-failure branch with mixed outcomes and retries.
- Release the application once even when the exit checkpoint fails.
- A cancellation before the capture is written removes what it retained.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): vendor package review round

- Match apt sources through `apt-get indextargets`, which covers flat `./`
  and `/` suites and gives each release file and sources entry.
- Accept a key whose signature verifies even when the release carries
  another signature without a key here; keep only the verifying key from
  a keyring holding several (OpenPGP packet splitter).
- Install the package from its repository's release (`name/<release>`),
  declare one source per URI and suite, support only the capture host's
  architecture, and refuse Ubuntu Pro repositories.
- List only library packages the computer can install; walk libraries only
  for vendor installs, with RPATH inherited as ld.so does, normalized
  paths, and DT_NEEDED bounded while reading.
- Put --no-sandbox after the program an env wrapper launches; keep the
  gpgv folder's owner when its removal fails; respect --max-file-bytes for
  keys; wait 0.25 s on a busy SQLite database in data/get.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(desktop): keep the vendor spec's gpgv command on one line

A code span broken across lines left `<binary keyring>` for VitePress to
read as an unclosed HTML tag, so the docs build failed.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* feat(desktop): add a validated task to exported desktop applications

Each capture can now yield one agentenv task in its exported bundle. An
agent writes the task (a prompt plus declarative checks over the app's
data/get views); REA validates it and stays model-free.

- `describe-desktop-application-task` summarises a capture's net change
  per file (role, format, views before and after) and drafts checks.
- Checks: file presence, lines present/absent/counted, JSON-pointer values,
  SQLite rows and counts. REA keeps a task only if a check fails on the
  seed and every check passes on the captured end state; a file that was
  not retained at the baseline counts as absent, as the computer starts.
- `export-desktop-application --task` writes tasks/NAME.json (deploy,
  agent, skills, recording, prompt, verifier), a compiled verify.py that
  reads data/get, and an eval. A boundary test runs the verifier under
  python3 and checks it agrees with REA's evaluator on every check kind.
- Docs, spec and skill guidance, with the solve-rate recipe.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(desktop): keep the seed test in its own block

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(desktop): record the task verifier driven in an agentenv computer

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(desktop): record the Typora task run in an agentenv computer

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep task checks bounded, complete and attributable

- line_count counts lines holding a substring (contains) instead of
  matching a regular expression, which could stall the verifier on
  agent-written text and read differently in Python.
- value_equals of a whole object or array is undecided on a truncated
  view.
- The draft keeps a database whose rows changed under an unchanged hash,
  and a file whose truncated views match while it changed.
- A task file that cannot be read keeps the reader's detail, and a failed
  cleanup keeps the read failure as its primary.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): leave a file with one version out of the task draft

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(desktop): update the task verification's test counts

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(desktop): record the task solve rate with Claude Code and Sonnet 5.5

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* feat(desktop): capture and export apps installed from a downloaded .deb

capture-desktop-application --package-file reads the file's control fields
with dpkg-deb and records its SHA-256, size and dependencies when it holds the
installed package; the file itself is never kept. The library walk now also
runs for local installs.

export-desktop-application --package-url declares agentenv's
Download(url, sha256) for that file, its dependencies and library packages as
apt packages, and a run script that installs it with dpkg.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): seed app-named dotfiles and respell UTF-16 seeds

The capture now treats dotfiles in the home named after the application
(.varicad-cfg.ini, .notesrc) as state roots, so a file the app only reads
during the capture is still seeded. The exported seeding respells the
captured home in UTF-16 text files with a byte-order mark, keeping the mark.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): hold readiness until the app's own window shows

An exported app is ready only once a window of its class that the taskbar
lists is shown, so a splash screen of the class, which skips the taskbar, no
longer counts as the app being up.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* docs(desktop): record VariCAD captured, exported and run in an agentenv computer

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep exported views strict JSON for infinite and inexact numbers

The exported data/get spells infinite and negative-zero SQLite reals as REA's
SQLite reader does ("Infinity", "-Infinity", "-0"), and refuses a JSON file
holding a number that reading would change (1e999, integers past 2^53, -0,
rounded fractions) with the state view's own error, instead of a view with
an infinity in it.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep package-file facts tied to one file and URLs unechoed

- A --package-url refusal never repeats the URL, and credentials are checked
  before the scheme.
- The package file's identity must hold between dpkg-deb's read and the hash.
- A failed close keeps its cleanup owner even when the capture is cancelled.
- Readiness also ignores windows typed as splash screens.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): record database logs and keep state changes distinct

- A selected path that is not a directory brings its -wal and -journal as
  content roots, so the capture records whether they exist and retains them.
- The state view treats a file as absent only under recorded content roots
  and refuses a database whose log presence is unknown.
- JSON changes list containers too, so an array that becomes an object with
  the same members is a change.
- Key file entries escape the key as a JSON pointer segment, so [a/b] c and
  [a] b/c stay apart.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep watching through unread samples and late workers

- An unreadable window list is unknown, not zero windows, and is named in
  the limitations.
- Before ending the session, live run-token carriers no parent link reached
  are tracked; an unreadable process table leaves the exit unknown.
- An env prefix's assignments find the program and name its XDG folders.
- flatpak run options that take a value are skipped with it, -- is honoured
  and a /arch/branch suffix is dropped from the id.
- State directories include the entry's full id.
- Path options refuse empty values; roots count toward the entry limit.
- A capture file whose close failed stays owned and is retried on discard.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): bound apt sources, keep older captures and cleanup owners

- Sources files parse into one stanza per line or deb822 paragraph with its
  URIs and suites kept as lists, so no URI x suite product is built.
- Repository architectures and release are optional, so captures written
  before they were recorded parse; the export treats them as unrestricted
  and unknown.
- Library sources are matched against every index of a declared
  repository's URI, suite and components.
- Two failures side by side keep both causes and both cleanup owners, and a
  host file whose close fails reports a lease on its handle.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): match escaped key file entries and suggest containers through members

- The draft's key file lookup uses the state view's escaped `group/key`, so a
  key holding `/` or `~` still gets its suggestion.
- JSON and XML changes now list containers too; the draft suggests an added
  or removed container through its listed members, and a container only
  when none of its members is listed.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): read relative PATH entries from the launch folder

A program, or an empty or relative PATH entry, is resolved from the folder the
program starts in, as the launch does, so `env PATH=. app` with the entry's
Path still finds the app.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* perf(desktop): compare JSON views on one shared path

JSON and XML changes are found by walking both trees with one shared pointer
path, building a pointer only for a listed value, so memory follows depth
rather than every container's full path. A pointer over 4096 characters is
counted but not listed. A 256-level document with 4000-character keys went
from about 251 MiB of heap to under 1 MiB.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep JSON Lines as text in the exported reader

The exported reader parses the whole text before an inexact number makes it
JSON with an error, so JSON Lines with an integer above 2^53 stay text as in
REA. Over-long integer spellings are unsafe without converting them. The
guide no longer claims large integers keep their value.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep the state-path help free of dash-led words

The CLI alias check reads `-wal` and `-journal` in help text as short flags,
so the help names the write-ahead log and rollback journal instead.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): never record or export apt source credentials

- Source URIs lose any user name and password as they are parsed, the way apt
  splits them, and so do index-target URIs and descriptions and the sources
  apt-cache policy lists, so matching works whether or not apt prints them.
- A repository whose entry held credentials is marked
  `uri_credentials_removed`, and the export refuses it, or an older capture
  whose URI still holds them, with a reason that names no URL.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): look programs up without normalizing their paths

Program paths and PATH entries are joined rather than resolved, so `..` after
a symbolic link means what it means to the launch. The lookup moves to its own
module.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): note inexact JSON numbers with a flag, not a list

The exported reader only needs to know whether any number was inexact, so it
keeps a boolean instead of every rejected spelling.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): refuse older captures that still hold apt credentials

A capture written before credentials were removed counted the credentialed
repository's libraries as installable, so the export refuses it whole and asks
for a new capture rather than declaring packages no source offers. Recorded
policy sources are redacted in export messages too.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(desktop): keep the credential fixture on an example host

A login on a real host reads as a secret to the commit scanner, so the older
capture's fixture uses apt.example.com like the other credential tests.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): tidy looked-up paths and search relative entries only for env

Empty and `.` segments are dropped from a looked-up program path, which keeps
`/snap/bin/` entries recognisable as snaps, while `..` is still left for the
kernel. Relative and empty PATH entries are searched only in the PATH an `env`
prefix sets, which travels with the exported launch; the host's own PATH does
not.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): keep excluded and unwalked database logs unknown

The capture records the paths every walk left out, and the state view treats
a log as absent only under content roots the baseline walked completely and
outside those exclusions, so an excluded or unvisited log leaves the database
unread rather than read without it.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): judge JSON numbers after duplicate keys settle

The exported reader marks an inexact number instead of flagging it during the
parse, then looks for marks in the parsed value, so a number a later duplicate
key overwrote no longer refuses the file, as in REA.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): redact a repository's policy source when it names it

An older capture whose policy source matched no sources entry kept that text
whole, and the export named the repository by it; the export now names it
without any user name or password.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): never signal the launch group on unknown membership

When the current read cannot observe a carrier's process group, the carrier
is signalled on its own instead of letting an older process-table row grant
a group-wide SIGTERM.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): look programs up in the launch's order and refuse host-relative finds

The lookup searches PATH as the launch does, an empty entry meaning the
launch folder, so inspection and launch name the same program. A program found
only through a relative or empty entry of the host's own PATH is refused,
since the exported computer would not have it; an env prefix's PATH travels
with the command.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): count unchecked paths and keep logs behind them unknown

Each walk counts the paths it could not stat and the directories on another
device it did not enter, and the checkpoint records it as `unchecked_paths`.
The state view treats a log as absent only when the baseline left nothing
unchecked, so a log whose stat failed stays unknown.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* perf(desktop): scan parsed JSON with one iterator per level

The check for marked numbers walks the parsed value with an iterator per
nesting level instead of copying each container's children; a million-entry
array went from about 15.7 MiB to 8.1 MiB of peak traced memory.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(desktop): start a relative program from its captured folder

An exported launch whose program path is relative, such as `./app` from an
entry's Path, now changes to the captured working directory first, as it
already did for relative arguments.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-05 15:14:04 +08:00
morlutoandCursor Agent f1622fc8b4 feat(native): page retained feature traces (#8585)
* feat(native): page retained feature traces

* fix(snapshot): retain linked source evidence for replay

* test(snapshot): verify linked foreign evidence stays scoped

* docs(mcp): clarify imported residual questions

* docs(mcp): guide trace reference classification

* fix(cli): report result sources when Evidence publication fails

A trace keeps linked sources on the result. Use those records for the
undelivered source closure as well as the bundle, so a refused output
does not report them as not captured.

* ci: rerun pull request checks

The merge of origin/main did not start the CI workflow for this head.

---------

Co-authored-by: Cursor Agent <cursoragent@cursor.com>
2026-11-05 03:26:31 +08:00
morluto 78d7bf3ea0 docs(native): clarify memory and file byte sources (#8829)
* docs(native): clarify memory and file byte sources

* docs(native): qualify Ghidra fixup coverage
2026-11-05 01:41:39 +08:00
Ha1baraA1 bd7002b441 fix(cli): export source Evidence for native value traces (#8297)
* fix(cli): export source Evidence for native value traces

* fix(cli): export source Evidence for native value traces

* fix(cli): preserve trace completeness in summaries
2026-11-04 19:56:50 +08:00
Wenyu Chiou e416ce1983 fix(cli): preserve Markdown validation error cells (#7978)
fix(cli): preserve markdown validation error cells
2026-11-04 19:54:29 +08:00
Abel YagubyanandAbelo9996 1dc9e8774d fix(cli): keep marker-only Markdown paragraph facts literal (#7813)
Fixes #7634

Co-authored-by: Abelo9996 <Abelo9996@users.noreply.github.com>
2026-11-04 19:48:12 +08:00
Beqa 54146627f0 fix(cli): emit compact JSON validation errors for demangle-swift (#7622)
* fix(cli): emit compact JSON validation errors for demangle-swift

Piped and redirected --json argument diagnostics went through Incur's
always-indented Formatter, bypassing REA's destination-aware writer.
Buffer non-TTY SDK JSON like JSONL and rewrite through writeJsonOutput.

* fix(cli): keep token-count for piped SDK JSON documents

Compact JSON rewrite for non-TTY SDK output returned early before
token controls, so --llms/--schema --format json --token-count printed
the document instead of its count.

* fix(cli): do not token-count non-document JSON captures

Completion hooks and other non-JSON --json pipe output must stay verbatim;
token-count on non-JSON SDK captures applies only with sdkDocumentControls.

* test(cli): assert demangle JSON validation by code, not wording
2026-11-04 19:40:27 +08:00
2SinceJuly 1dd70f6c2b fix(cli): seal in-process Evidence before publishing (#8468)
* fix(cli): seal in-process Evidence before publishing

The CLI rebuilt a plain bundle from records it had already authenticated,
so writeEvidenceBundle cloned and authenticated the complete analyzed
graph again at the final checkpoint. On a default heap that second copy
could exceed available memory after minutes of analysis and discard the
whole run.

Seal the in-process bundle once so publication can stream the canonical
form without the redundant authentication copies. The regression test
fails on the previous behavior with resource_constraint under a one-byte
heap allowance.

Fixes #8411

* fix(cli): preserve the heap check for mutable Evidence

Only seal the publication bundle when every record is already immutable.
Mutable producer records keep the writer's existing heap check instead of
being copied before that check. The regression now covers the safe
fallback and lets the shared temporary-directory fixture own cleanup.

* test(cli): keep a distinct mutable source in the publication regression

Seal the main record and give the mutable source its own evidence ID so
the map cannot replace it before the bundle guard runs.
2026-11-04 19:32:44 +08:00
hhangandhhang f8ec48095a fix(cli): guide delimited analysis view exports (#8730)
Co-authored-by: hhang <169027046+xu91102@users.noreply.github.com>
2026-11-04 19:10:35 +08:00
Abduallah Jamal 47cedcc93a fix(cli): reject empty artifact command targets before resolution (#8834) 2026-11-04 16:47:46 +08:00
morluto c3647ade1e fix(objdump)!: preserve unknown executable identity (#8824)
* fix(objdump)!: preserve unknown executable identity

* fix(objdump): avoid claiming rejected architecture output

* fix(objdump): align launch errors with command identity

* test(objdump): avoid coupling identity checks to wording

* test(objdump): align launch failure expectations
2026-11-04 02:01:44 +08:00
ShuaixinHuang 510e83eadc fix(firmware): recommend the operation-specific engine (#8668) 2026-11-03 09:17:33 +08:00
Kaoru0822andClaude Opus 5.5 144843ccc2 fix(debugger): let REA exit when a debugger could not be stopped (#8652)
* fix(debugger): let REA exit when a debugger could not be stopped

`rea debug-with-gdb` and `rea debug-with-rizin` printed cleanup_incomplete
and set exit status 1, but the retained child and its pipes kept the event
loop alive, so the process never exited. A stdio MCP server whose client
disconnected hung the same way.

closeOwnedDebuggerSessions is the owner both managers finish through. It now
unreferences retained sessions, as supervised providers already do after
incomplete cleanup, restores the references on retry, and names the retained
process IDs. The one-shot commands report those IDs, since no later command
can retry. Debugger ownership, signals and detach behavior are unchanged.

GDB cleanup requests also no longer hold the host until their 120 s command
deadline, because cleanup already bounds its own wait.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(debugger): name retained debuggers when an MCP server shuts down

An MCP server that exits with a retained debugger logged only "REA provider
cleanup failed" and "could not close cleanly", so nothing named the process
left for the caller to check. The PIDs were on OwnedDebuggerCleanupError, but
each shutdown reporter read only the outer aggregate's message, and the debug
failure_cause description dropped the field too.

The failure type now lives in its own dependency-free module with one reader
that walks composed failures. The shutdown report, the server's onclose log,
the debug description and the one-shot CLI all use it, and the shutdown report
writes the same remediation the CLI returns.

The fake debuggers now model each request exactly, with real reply shapes, and
a request they do not model fails the test.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(debugger): compare retained-debugger guidance with its formatter

The new checks froze the wording "Check process ... and its target".
docs/testing.md asks guidance checks to compare with the owning formatter,
alongside independent checks of the facts. They now do, and each still proves
the process ID is named, because a formatter comparison alone would pass if the
formatter dropped it.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-02 05:16:34 -08:00
Kaoru0822andClaude Opus 5.5 710fad8acf feat(evidence): discover missing Evidence links without transferring records (#8633)
* feat(evidence): discover missing Evidence links without transferring records

An agent could only learn that a retained record's source was absent by reading
complete records or by having a downstream analysis refuse. The summary said
nothing about links, and complete-record retention was easy to mistake for
source closure.

- Add detail: links to get_evidence_bundle and CLI inspect-evidence-bundle:
  paged link rows with retained or missing status and no record payloads, for
  selected records against the whole session or file.
- Add retained-closure traversal, the walk composed workflows require, reporting
  complete or incomplete. Direct reads make no closure claim.
- Count direct and missing direct links in the summary.

Fixes #8454

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(evidence): count a repeated Evidence link once in every delivery

The Evidence schema does not deduplicate evidence_links, so the summary counted
a repeated link twice while link rows and counts reported it once. Both now read
one helper for a record's distinct direct links.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(evidence): validate link delivery against the advertised schemas

The test never called tools/list, so neither the shared validator nor the MCP
client checked its replies against what each profile advertises. A schema that
rejected the links result could have passed. Fetch the advertised definition and
validate every request and reply against it.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-02 05:14:34 -08:00
Kaoru0822andClaude Opus 5.5 3f4aff2f22 fix(cli): keep captured source Evidence when one-shot delivery never commits (#8632)
* fix(cli): keep captured source Evidence when one-shot delivery never commits

A completed observation that was cancelled at final close, failed cleanup, or
never reached bundle commit returned its evidence links but dropped the source
records the invocation had already captured. The caller could neither read those
records nor tell whether they were missing, captured or written.

Report the closure at publishCliAnalysisEvidence, the shared boundary every
--evidence_output command uses. details.source_closure carries authentic captured
records within 64 KiB and explicit omissions: not_captured for a link this
invocation holds no record for, and not_inlined for a captured record outside this
response. A committed bundle keeps its receipt instead, nothing is written after
cancellation, and successful delivery is unchanged.

Fixes #8589

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(cli): keep the typed failure when collecting source closure cannot finish

A captured source with a data-sized evidence_links array made
pending.push(...links) exceed V8's call-argument limit. On final-close
cancellation or a refused publication that RangeError replaced the original typed
failure, which is the one outcome this delivery step exists to preserve.

Walk the closure through a Set, which is a deduplicating breadth-first queue, so
no link becomes a call argument and each link costs one lookup however often it
repeats. undeliveredSourceClosure now owns authentication and never throws: if
examining the closure fails, it reports collection_failure with the bounded error
type and an unknown closure state, and the original failure is still returned.

Fault the final-close tests on the scope the command gave to matching, after
matching completed, and assert that close was reached, so a moved close fails
instead of passing on an earlier one.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-02 00:50:19 -08:00
Kaoru0822andClaude Opus 5.5 85013da0ce fix(cli): describe one-shot timeouts for an invocation whose session has ended (#8535)
* fix(cli): describe one-shot timeouts for an invocation whose session has ended

A one-shot CLI analysis that reached a provider deadline told its caller
that the Ghidra session remained usable and reported a runtime-editable
limit applying to the next operation, although the command had already
released its provider session and runtime.

The shared error projection now takes an explicit caller lifetime.
Providers keep guidance that holds only for a continuing caller (session
reuse, same-session runtime updates) apart from the request outcome, and
the presentation adds it only for a continuing caller. One-shot owners
(runDirectAnalysis, runProviderAnalysis, finishAnalysisCommand and the
JavaScript application command) project for the invocation: details.limit
reports scope rea-invocation, applies_at next_invocation and the launch
environment seed, and the remediation leads with that setting for a new
invocation. MCP output keeps its runtime-update and same-session guidance.

Covers the Ghidra decompile timeout, decompiler failure, regex stack
exhaustion and startup timeout, the shared regex deadline, the Kuna
decompile timeout and the Hopper startup timeout.

Fixes #8311

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* fix(cli): project composed child failures for the caller lifetime

Cleanup composition embedded its primary and cleanup failures as
continuing-caller projections, and baked the primary's message and the
cleanup's remediation into the composed error. A one-shot command whose
Ghidra startup timed out while shutdown also failed therefore still
reported a rea-runtime limit and update_analysis_settings in
details.diagnostics.primary_error.

childFailureDiagnostics now snapshots each embedded child at composition
for both lifetimes when its projection depends on the caller, so cleanup
history keeps its composition-time state and the final projection selects
the caller's form. composedCallerGuidance re-attributes message and
remediation with their continuing-only parts kept separate. Error copies
and redaction keep the invocation diagnostics. The Hopper startup timeout
now carries its continuing guidance on the error like the other producers.

Invocation limits keep agent_editable and rea_restart_required, with
values that hold for a new invocation, so only scope and applies_at
change and environment is added.

In existing-project mode a decompile timeout or a cancelled session now
says the next session copies and opens REA_GHIDRA_PROJECT_PATH again
rather than repeating import and analysis.

Tests compare delivered guidance with the owning formatters and constants
instead of freezing prose.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-01 08:57:32 -08:00
Kaoru0822andClaude Opus 5.5 eb39a07966 feat(evidence): read selected complete records without the whole bundle (#8528)
* feat(evidence): read selected complete records without the whole bundle

get_evidence_bundle could discover a record by exact ID, but reading it
required the complete canonical bundle: complete + filters was rejected,
and inspect_analysis_view refuses parents without a view, such as
annotations, pseudocode sources and native traces.

- Add detail: records, a page (offset, limit; default 0, 8) of the
  complete matching records in canonical bundle order. Records keep their
  original IDs, subjects, providers and readback; missing_evidence_links
  names direct links of the returned records that are not retained.
- The selection is labelled as historical and not an importable bundle;
  complete keeps returning the canonical bundle, and offset/limit
  require detail: records.
- Filters keep one owner shared by summary and records delivery, for the
  MCP session and the CLI's inspect-evidence-bundle.
- An oversized record page now advises a smaller limit or one
  evidence_id; whole-bundle overflow guidance mentions record reads.

Fixes #8307

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

* test(evidence): compare record-selection guidance with its owners

Assert the record-selection limitations and oversized-page guidance
against their owning constants, and check the reported limit facts
separately, instead of pinning explanatory phrases.

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
2026-11-01 08:56:58 -08:00
gensokyo-dev e18594b247 refactor(composition): unify capability bindings and cleanup ownership (#8441)
Bind typed service creation, observed availability and retryable cleanup in one composition owner. Reuse selected CLI/MCP factories and canonical contract groups without copying provider operation inventories.

Closes #8429. Refs #740.

Validated paired real application workflows, actual local Codex CLI Terra/high use, complete Evidence and Unknown checkpoint parity, compiler-backed import boundaries, SDK schemas and final real mixed routing. Automated review findings were fixed at their producing owners. Existing exact-base CodeQL alerts are documented on the PR under the owner-authorized unrelated-check exception; no global alerts or security rules were changed.

Assisted-by: Suika (gensokyo-skills:suika-scatter-gather-planning)
2026-11-01 13:30:21 +08:00
gensokyo-dev a989c0e458 refactor(evidence): unify retained inputs across domains (#8299)
Declare logical Evidence sources once and resolve exact retained inputs through
shared application workflows across 20 composition tools. Preserve domain-owned
authentication, source closure, caller choices, coverage and resource admission.

Validation includes public CLI/MCP regressions, local Codex terra/high trials
and fresh-import real-artifact workflows. Measurements, failed attempts and
coverage limits are recorded in docs/verification/evidence-input-composition-2026-10-31.md.

Fixes #8293.
Fixes #8281.

Assisted-by: Suika (gensokyo-skills:suika-scatter-gather-planning)
2026-10-31 14:45:21 +00:00
Entrpi e6d0618979 feat(artifacts): inventory and extract ESP flash layouts (#8228)
* feat(artifacts): inventory and extract ESP32 firmware images

ESP32-family app and bootloader images (magic 0xE9) had no reader, so
open_binary refused OTA downloads, app partitions and bootloaders.

Add the esp-image container format behind inspect_artifact and
extract_artifact. A pure decoder reads each byte once and keeps only
fixed-size fields. Derived facts cover the chip, from a table cited to
ESP-IDF v6.1; segment classification as ESP-IDF's should_map and
should_load; checksum and appended SHA-256 results; app and bootloader
descriptors; Secure Boot v2 signature blocks, observed and unverified;
and undescribed trailing byte ranges. Truncation and undescribed bytes
make coverage unknown. ESP8266 images are refused with a specific
reason, and ciphertext stays unrecognized.

Add the format to every target, Evidence, snapshot, live-summary and
artifact vocabulary, document it, and add an optional verify:esp-images
lane that compares esptool-built images with esptool image-info and
espsecure signature-info-v2.

Refs #3615

* test(artifacts): run the ESP image lane on esptool v5.6.0

The lane compared descriptor fields only when esptool image-info printed
one, so a descriptor that REA reports and esptool does not print passed
without comparison. Compare the descriptor kind in both directions.

Record that the lane passed for all 13 images with esptool and espsecure
v5.6.0, the version the layout facts cite, as well as with 4.12.0.

* refactor(artifacts): define ESP image layout sizes once

The decoder and the derived facts each defined the segment-header,
appended-digest and flash-sector sizes, the erased-byte scan and the
offset formatter. Define them once with the other fixed-layout structures
and import them in both places. The signature slot count is the one
constant that drives the slot scan.

Correct the observedEnd comment: it is the end of the last chunk read.

* fix(artifacts): report ESP-IDF's segment length limit by chip

ESP-IDF's verify_segment_header rejects a segment of 16 MiB or more
unless the chip maps flash through 32-bit cache addresses
(SOC_SPI_MEM_SUPPORT_CACHE_32BIT_ADDR_MAP: ESP32-S3, P4, C5, C61, H4 and
S31 in v6.1). Record that capability in the chip table and add a
limitation for such segments; unknown chips get none.

`loaded` repeats should_load. It does not mean the bootloader accepts the
segment: verify_load_addresses still rejects one outside the chip's RAM,
which REA does not model. Say so in the docs, the skill reference and the
inventory limitation.

* test(artifacts): check ESP lane tools first and verify extraction

The lane started work before checking its tools, so a missing RISC-V
target, ld.lld, esptool or espsecure surfaced as a raw spawn or command
error. Check each one before building and name the variable to set. Warn
when esptool is not v5.6.0, the release the layout facts cite.

Assert each segment's class for the ESP32-C3 app, its variants and the
bootloader, as the Xtensa image already did. Extract the app and the
signed image through the CLI and compare every file with the bytes at
esptool's segment offsets or in the appended signature sector; the
source's SHA-256 must be unchanged and equal the reported root_sha256.

* docs(artifacts): state what the ESP image lane does not establish

The Verification section listed the lane's checks but not its gaps: only
ESP32-C3 and ESP32 images come from a real producer, no real project
build, OTA download or flash dump is inspected, no signature is verified,
and the lane does not run in CI.

Record the timing of the final lane run on esptool v5.6.0.

* fix(artifacts): compare ESP segment declarations

Segment entries hash only their data, so compare_artifacts reported a
segment that moved to another load address with the same bytes as
unchanged; only the image itself changed. Compare each segment's
load_addr and data_len as its declaration, as Node SEA and PyInstaller
members are compared, and count a changed declaration as a metadata
change, also when content is unavailable.

Header offsets are layout and the classification is derived, so neither
is compared.

* test(artifacts): run ESP lane commands as owned process trees

The lane ran its tools through execFile. A timeout killed only the direct
child, so a linker or assembler that Clang or GCC had started could keep
running while the lane removed its workspace. Run every command through
createVerifierCommands, check the tools inside withVerifierCleanup, and
remove the workspace only after commands.close() has stopped every tree;
a failed close keeps the workspace.

Only a nonzero exit now counts as a refusal or an expected esptool
failure; timeouts and spawn failures propagate. Supervising each command
roughly doubles the lane's run time.

* test(artifacts): cancel ESP decoding after its first decoded chunk

The cancellation test requested cancel or close on setImmediate, which
can land while the file is still being opened and checked, so it never
showed that decoding had started. It also passed against a reader that
ignored both requests while decoding. Acknowledge the decoder's first
chunk, then cancel or close, join the operation, and assert that no
later chunk reaches the decoder and that the reader ends closed.

* docs(artifacts): record which ESP metadata comparison ignores

Segments are compared by their declaration. The image's and the
signature blocks' format_metadata are not: every field comes from their
own bytes, which content comparison already covers, and a block's
image_digest_matches follows the image's content.

* feat(artifacts): inventory and extract ESP flash layouts

A whole-flash dump of an ESP32-family chip was read as its bootloader
image, with the partition table, apps and data left as undescribed bytes,
or refused when it began with erased flash. Read it as an esp-flash-image
container instead.

The partition table is decoded as esp_partition_table_verify accepts it
and is found at the caller's partition_table_offset, at the default
0x8000, or by scanning 0x1000-aligned sectors for a table whose MD5
verifies, which the inventory reports as derived. The bootloader is
located at its chip's ROM bootloader offset. Each partition is an entry
with its declaration in flat format_metadata; the bootloader and app
partitions carry ESP image facts from the existing streaming decoder; the
otadata records are reported with a selection derived without rollback or
anti-rollback, and the running partition stays unknown. One unreadable
partition does not hide the others, and extraction writes every partition,
nvs_keys included, as ordinary data.

Flash layouts are detected before single ESP images. The scan runs only
when an ESP image sits at a ROM bootloader offset, and is refused when a
bootloader at another chip's offset shows that the dump does not start at
flash address 0. open_binary gains flash_offset and partition_table_offset,
which require format esp-flash-image and are part of the snapshot target
identity; the CLI takes them with --target-format esp-flash-image.
Comparison treats a partition's label, type, subtype, range and flags as
its declaration.

* test(artifacts): verify ESP flash layouts with gen_esp32part, merge-bin and otatool

Add the optional verify:esp-flash lane. It builds default and relocated
partition tables with ESP-IDF's gen_esp32part.py, assembles dumps with
esptool merge-bin, including one written from flash 0x1000, and writes
OTA records with otatool through flash_file_tool.py, which replaces
parttool's esptool calls with reads and writes of the dump file.

It compares REA's bootloader and app facts with esptool image-info, every
partition with gen_esp32part.py's decoding of the extracted table, and the
OTA records and derived slot with otatool read_otadata after each switch.
It also checks extracted bytes and source integrity, the scan and caller
table offsets, flash_offset on the 0x1000 dump, a corrupted app beside
valid partitions and a truncated dump. ESP32 linker scripts place the
conformance bootloader and app in ESP32 address ranges.

* fix(artifacts): read ESP flash layouts as the bootloader does

Read the partition table as bootloader_utility_load_partition_table
does: the last factory, otadata and same-subtype OTA declaration wins,
and a limitation names repeats. Plan each otadata record within its
partition and the dump. An otadata partition smaller than two sectors
selects none, the bootloader's INVALID_INDEX; a record the dump lacks
leaves the selection unknown while the other record stays reported. The
fallbacks follow the bootloader's indexes: ota_0-fallback and
factory-fallback name no partition when the table declares none, and the
assumptions add GPIO holds and deep-sleep wake.

Refuse a dump whose bootloader contradicts its origin before the default
table offset is tried, whether flash_offset was omitted or given, and keep
the ESP image reader's ESP8266 refusal. A table never lies inside the
located bootloader image, so single app images are no longer scanned. An
explicit esp-flash-image selection is decided before other container
signatures, and the native commands' --target-format no longer takes it.
Say when no bootloader confirms the default origin.

Exempt the primary bootloader and partition_table entries of ESP-IDF 5.3
from placement limits, report every region inside a longer one, and name
partitions by index when labels repeat ignoring case. Keep an undecodable
label's bytes in label_hex and compare them. Word undescribed ranges as
starting at a byte that is not erased, and treat a short erased region as
erased.

Add an MCP compare_artifacts test for partition declarations, reader
identity and close tests, scan edge cases, the 0x2000 ROM offset and a
literal otatool CRC.

* test(artifacts): verify ESP primary layout entries and the otadata fallback

Build a table with the primary bootloader and partition_table entries
that gen_esp32part.py fills from --primary-bootloader-offset, and check
that REA reads it with complete coverage, no overlap or misplacement
limitation, and a table that agrees with gen_esp32part's decoding. Erase
the otadata with otatool after the slot switches and check the records
against read_otadata and the factory fallback.

* fix(artifacts): keep ESP flash coverage complete for a dump cut short

An esptool merge-bin dump ends after the last part it wrote, usually inside
its last partition. Such a partition made the layout's coverage unknown, so
artifact comparison of two merge-bin dumps reported every unchanged
partition as unknown.

The partition table names every partition whatever the file's length, so a
partition cut short or left out by the end of the file hides no entry. As
the ESP image reader does for a cut-short segment, its entry holds the bytes
the file has and an entry limitation gives the declared size; a partition
with no bytes stays in partitions_outside_dump. Coverage stays complete
unless undescribed bytes remain or no bootloader is located. An MCP
compare_artifacts test of two dumps that end inside ota_0 now classifies
every partition, and fails on the old rule.

* fix(artifacts): report written bytes in ESP partitions, erased slots included

An app slot is erased for ESP-IDF's bootloader when its image header bytes
are erased flash, and REA reported only that status. A slot can still hold
data further in: a dump read from a device held a complete older app image
1 MiB into an OTA slot reported as erased, with no limitation.

Each partition entry now records where the bytes the dump holds are
written, relative to the partition: written_offset, the first byte that is
not 0xFF, written_end, just past the last, and written_bytes, how many are
not 0xFF. They are null for a partition outside the dump. The status stays
erased, which is the bootloader's view, and a limitation names an erased
app slot that holds written bytes and says they are not read as an image.
The reader reads every partition byte once more to find them.

* fix(artifacts): derive the ESP boot selection for every partition table

The boot selection lived inside otadata, so a table without an otadata
partition, the common factory-only layout, had none. ESP-IDF's
bootloader_utility_get_selected_boot_partition returns the factory index
when the table declares no otadata partition.

Move it to a top-level boot_selection that every layout has. Its basis
names the bootloader's branch: otadata, factory-fallback and ota_0-fallback
from the records, no-otadata for a table without otadata, none for the
bootloader's INVALID_INDEX, and unknown when the dump lacks a record the
bootloader reads, which replaces the null selection. running_partition
moves with it, and otadata keeps its partition index and records. The
assumptions name what each branch leaves out: no records assumption
without otadata, and none for none or unknown. The real-tool lane checks
no-otadata on a table gen_esp32part built without otadata.

* fix(artifacts): say when an ESP image is a flash dump read from 0x1000

An ESP32 dump read from flash 0x1000, as read-flash 0x1000 or merge-bin
--target-offset 0x1000 writes it, opened automatically as its bootloader
image with a megabyte of undescribed bytes and no next probe. The flash
reader refuses that origin, but nothing told an agent which flash_offset to
pass.

espFlashDumpOrigin owns the inference: an image of a chip whose ROM loads
the bootloader from flash R, at file offset F, is the bootloader of a dump
read from R - F when a partition table sits where that origin puts 0x8000.
The ESP image reader asks it for a non-app image at file offset 0, so the
result does not depend on how the reader was created, and records
flash_dump {flash_offset, table_file_offset}, null otherwise, with a
limitation that says to reopen the file as esp-flash-image with that
flash_offset. inspect_artifact proposes the same open_binary call as a next
probe, and the flash reader's misplaced-origin refusal names the offset.

* perf(artifacts): summarize nested ESP images in the flash layout summary view

The summary view returned an ESP flash layout's root facts whole, so each
app partition and the bootloader carried every segment and signature
block, about half of a dump's summary.

The summary view now gives each nested image a summary instead of its
facts: status, chip, entry point, segment count, load ranges (each mapped,
loaded or unclassified segment's address and declared length), the
checksum and appended SHA-256 statuses, coverage and limitations. Complete
detail keeps the full facts, every segment included, and the retained
Evidence is unchanged. On a 16 MiB device dump the summary's root falls
from 5,141 to 2,657 bytes, and the summary Evidence from 10,038 to 7,554.

* test(artifacts): expect the misplaced image the ESP bootloader search reports

8a748d3cc added misplacedImage to the bootloader search, which the
locator uses to name the origin a misplaced bootloader implies, but one
test still compared the search result without it. Expect the image's
chip and file offset, and no image for an unknown chip.

* fix(artifacts): give every ESP partition from the dump's start an entry

After ecbc1a772 kept coverage complete for a dump cut short, a partition
wholly past the end of the file still had no entry, only a
partitions_outside_dump row. Comparing a merge-bin dump with a full device
read then reported that partition as added or removed, as if one table
did not declare it.

Every partition from the dump's first byte on is now an entry holding the
bytes the file has: none for one past the end, with a limitation saying
the file holds none of its bytes, no image facts and null written fields.
partitions_outside_dump keeps only partitions that begin before the dump's
first byte, and coverage is unknown when one does, since it has no entry.
Two dumps that lack the same partition now compare it as unchanged, and a
dump against a longer one reports the partition as changed; an MCP test
of a merge-bin dump against a full one checks that no path is added or
removed.

Unlike the ESP image reader, which marks a truncated image's coverage
unknown because later segments and signature blocks may be hidden, the
flash reader can list every partition from the table whatever the file's
length; only the entry limitation follows the image reader.

* fix(artifacts): select no ESP app from a partition table the bootloader rejects

boot_selection followed bootloader_utility_get_selected_boot_partition but
not the table check before it. For a table whose MD5 does not match, or
that has a second MD5 entry, esp_partition_table_verify fails, the
bootloader selects no app and resets. REA still derived a slot from the
otadata records, although the table's own limitation said the bootloader
rejects it.

The selection now has basis none, with no assumptions, for a table the
decoder marks invalid. It also follows two more branches of the
bootloader: an otadata partition at offset 0, which the bootloader takes
for none, selects the factory index as no-otadata, and a table without an
OTA app selects its fallback even when the dump lacks a record, since the
bootloader then ignores the records.

The bootloader also rejects a table whose partitions end past the flash
size in its header. REA does not model that check; the format guide says
so.

* fix(artifacts): require the ESP dump origin's table to follow the image

espFlashDumpOrigin named a later flash origin whenever a partition table
decoded where that origin puts 0x8000. Bytes inside the image's own
segments could be read that way, so an ESP32 bootloader whose segment data
held table-shaped bytes at file offset 0x7000 was reported as a dump read
from 0x1000.

The table must now start at or after the image's end, the rule the locator
already applies to the default table. The ESP image reader passes the
image_end it decoded, or the file size for a truncated image; the flash
reader's refusal passes the end of the misplaced image's segments. The
bootloader search drops its misplaced flag, which only restated
misplacedImage, and the next probe formats offsets with offsetText.

Reader tests cover the 0x1000 and 0x2000 ROM offsets, a standalone
bootloader, bytes that begin like a table, an app with a table at 0x7000
and a table inside a segment; without the boundary check, three of them
fail.

* fix(artifacts): give the ESP flash summary its own kind and each image's identity

The summary view's ESP flash root kept kind esp-flash-image, so a consumer
bound to kind could not tell an image's summary from its full facts, and
the advertised schema held two objects with the same kind const. It is now
esp-flash-image-summary.

The per-image summary also dropped the descriptor, which is what tells two
app slots apart, and named each image only by its partition index, which
the summary view, having no entry rows, could not resolve. Each nested
image now carries its entry path from the layout plan, in both views. The
summary adds the descriptor kind with its identifying fields (an app's
project_name, version, idf_ver, secure_version and app_elf_sha256; a
bootloader's version, idf_ver and secure_version), the signature block
count and each load range's classification. Its enums and fields derive
from the schemas that own them.

An MCP test reads a dump with an app in ota_0 and an erased ota_1 that
holds older bytes: it checks both summaries, that the summary's inventory
Evidence is the one the complete view returns with full facts, and the
erased slot's written range.

* test(artifacts): cover cancel and close during the ESP written-bytes scan

The written-bytes pass reads every byte of each partition the dump holds,
checking that the reader is open before each chunk, but only app decoding
had a cancellation and close test. A data partition, which only that pass
reads, now holds 9 MiB; once the scan has examined its first chunk, a
cancel rejects preparation with the caller's reason and a close with
unavailable, and the scan examines no further chunk.

The erased-slot test now asserts the whole set of erased-slot limitations,
so factory, ota_0 and nvs, which the bootloader reads or which are not app
slots, are shown to have none.

* docs(artifacts): re-time the ESP flash lane and state only observed causes

The lane ran again after its assertions changed; both esptool runs passed,
and the timed run's figures replace the earlier ones. The erased-slot
paragraph no longer names a cause for the older bytes, which REA cannot
observe, and the skill reference states that every table has a
boot_selection in its own sentence, with the none basis for a table the
bootloader rejects.

* fix(artifacts): retire ESP flash members as the ESP image reader does

#7498's maintainer commits made the ESP image reader keep a member owned
until its consumer closes it, retire fully buffered bytes when
cancellation arrives after production, and refuse to finish an inventory
paused across close. The ESP flash reader was copied from the earlier
reader. Main's shared stored-member lifecycle cases failed two of eight
against it: a paused inventory completed after close, and buffered member
bytes stayed readable after cancellation.

Give the flash reader the same lifecycle and run the shared cases against
it.

* docs(artifacts): re-time the ESP flash lane after merging main

The lane passed again with esptool v5.6.0 and 4.12.0 on the merge of upstream main. Record the v5.6.0 run's time and peak resident set.

* fix(artifacts): read ESP image Evidence recorded before flash_dump

The flash layout work made `flash_dump` a required field of the
`esp-image` root metadata. Evidence recorded before it has no such
field, so newer REA rejected records that were valid when they were
made: `compare_artifacts` and `inspect_analysis_view` reported
`evidence_integrity_mismatch` for them.

The field is now optional when read. A record without it parses as it
is, so the graph digest it commits to still matches; nothing fills the
field in. The image reader still writes it for every image, and the
inspection probe reads a missing field as no hint.

A regression test recommits an image inventory without the field and
passes it inline to `compare_artifacts` and `inspect_analysis_view`.
Against a server built with the required field, `compare_artifacts`
rejects it.

* fix(artifacts): stop the ESP flash gap scan when the reader closes

The scan for the first written byte in each undescribed gap checked
only the caller's signal. `close()` marks the reader closed and waits
for preparation, so it waited while the rest of a long erased gap was
read.

The gap scan now takes the reader's open check, as the written-bytes
scan and the image decoder do, and checks it before each chunk. Tests
cancel or close the reader after the scan's first chunk of a 9 MiB
erased gap and confirm that no later chunk is examined.

* fix(artifacts): name ESP partitions with Windows device labels by index

The safe-label rule accepted labels such as `NUL`, `con` or `COM1`, so
extraction wrote `partitions/NUL.bin`. Windows reserves those names
before any extension, and ordinary Windows tools cannot use such a
file.

A label that is a Windows device name (`CON`, `PRN`, `AUX`, `NUL`,
`COM0`-`COM9` and `LPT0`-`LPT9`, any case, alone or before a dot) now
takes the existing index fallback. The partition metadata and the
entry's source path keep the label.

* fix(artifacts): read ESP flash partitions' written bytes in one pass

Each partition got its own scan of the bytes the dump holds, so
partitions declared over the same bytes read them again and again.
Overlaps only add limitations, so a crafted table reached this normally:
94 overlapping partitions over a 32 MiB dump would examine about 3 GiB
before the first entry.

The reader now reads the bytes the partitions cover once. Partition
boundaries cut them into segments; one pass counts each segment's
written bytes and bounds, and each partition's extent is the sum of the
segments inside it. Every partition keeps its own declaration, extent
and limitations. The pass checks the reader's open state before each
chunk, as the per-partition scan did.

A test declares 60 partitions over one MiB, 40 over all of it and 20
over its first half, and checks each partition's extent and the
overlap limitations. The reader reads 1,113,256 bytes of the
1,114,112-byte dump; one scan per partition read 52,493,480.

* test(artifacts): fail the ESP lanes on failed commands and refusals

`otatool` turned a nonzero exit into returned text, which its callers
discarded, and `inspect()` returned `{ refused }`, which the flash lane
never checked. A failed command then surfaced later as a slot
assertion, an output-parser error or a TypeError, hiding its cause.

Commands the lanes need to succeed now reject with the output they
exited with: `otatool` and `inspect()` do so through a shared
`failedCommand`. An expected refusal is opt-in: `refusal()` returns
REA's output and fails the lane when REA opens the file. The ESP image
lane's two ESP8266 cases use it.

Checked by calling `otatool` on a file without a table, `inspect()` on a
file REA refuses and `refusal()` on a file REA opens; each rejects with
its cause.

* fix(artifacts): require a partition entry in an ESP partition table

The decoder counted the slot, not the partitions, so a lone MD5 entry
over the empty prefix, followed by the terminator, decoded as a table
with no partitions. Default and caller-selected detection then accepted
that empty layout, although the guide requires one partition.

A table now needs one partition entry before its terminator. An MD5
entry alone is refused as `entry 1 at 0x20 ends the table before any
partition entry`. The cases cover the decoder and both automatic and
caller-selected location.

* fix(artifacts): decode an image shared by ESP app partitions once

Each app partition got its own decode, so app partitions declared over
the same bytes decoded and hashed the same image again and again, the
same pattern the written-bytes scan had. With 60 app partitions over
one 960 KiB image the reader read 64,029,736 bytes of a 1,114,112-byte
dump.

Regions with the same file range now share one decode; each keeps its
own copy of the facts. Partitions with different ranges still decode
separately, because truncation can change the facts: at most one decode
per partition the table holds, each within its partition.

A test declares 60 app partitions over one image, 40 holding all of it
and 20 cutting it short, and expects three decodes: the bootloader, the
whole image and the cut one. The 60-partition dump now reads
2,161,864 bytes, as a dump with one app partition does.
2026-10-31 15:24:32 +08:00
gensokyo-devandhhang 0ffed7a48c feat(android): trace callers of external DEX methods (#8154)
Resolve exact external method targets from directly encoded DEX invokes.
Preserve complete caller identity, bounded position evidence and follow-up
selectors. Report aggregate position coverage independently of the caller
inventory, and reuse bounded prototype facts within the exact session.

Absorbs #8096. Fixes #7811.

Co-authored-by: hhang <169027046+xu91102@users.noreply.github.com>
2026-10-31 01:07:18 +08:00
morlutoandCursor Agent 395b598383 refactor(admission): own inspector, web, and CLI state per host (#8058)
* refactor(admission): own inspector, web, and CLI state per host

Replace the process-global inspector, web-bundle, guidance, and JavaScript
counters with objects a host passes in, so independent instances do not
share admission or cleanup.

* fix(admission): keep worker and file cleanup on the host

Web-bundle and JavaScript workers retry only their host registry, and
each Inspector admission authorizes and closes its own file scope.
Browser providers can share one web-bundle admission.

* test(inspector): gate one admission's file cleanup

The isolation test delayed the first ArtifactResourceScope.retryCleanup
call, so a second call on a shared ElectronFileScope still finished.
Hold first.files.retryCleanup until the other admission's close
finishes, then release and join before restoring the method.

---------

Co-authored-by: Cursor Agent <cursoragent@cursor.com>
2026-10-30 05:23:33 +08:00
a108a1b817 fix(cli): report incomplete debugger cleanup as typed outcomes (#8021)
* fix(cli): report incomplete debugger cleanup as typed outcomes

debug-with-gdb and debug-with-rizin hand-rolled final cleanup in
try/finally blocks: a failed or interrupted final close only logged
and assigned the process exit status, so callers still received
complete successful Evidence with no typed error or partial
observation.

Both commands now route through the shared close owner used by the
other one-shot CLI commands (deliverCliAnalysisEvidence /
finishAnalysisCommand) via a small closeDebuggerCommandSession
helper. A rejected closeAll projects as ProviderCleanupError, which
the owner turns into cleanup_incomplete retaining the completed
Evidence as partial observation; a signal observed after finalization
projects as cancelled with the same retained observation. The
per-session close failure still only logs, preserving the rule that
the retained owner's closeAll decides completion.

Fixes #7378. Fixes #7429.

* test(cli): reject unmodeled GDB requests in cleanup regressions

* test(cli): match modeled GDB requests exactly

* Update tests/boundary/cli/gdbStartupCleanupCli.test.ts

Co-authored-by: greptile-apps[bot] <165735046+greptile-apps[bot]@users.noreply.github.com>

---------

Co-authored-by: morluto <76467478+morluto@users.noreply.github.com>
Co-authored-by: greptile-apps[bot] <165735046+greptile-apps[bot]@users.noreply.github.com>
2026-10-29 20:52:03 +08:00
morlutoandCursor Agent e124bdfc54 fix(cli): preserve literal Markdown rendering (#7938)
* fix(cli): preserve literal Markdown rendering

* fix(cli): retain literal Markdown attributes

* fix(cli): preserve literal punctuation in markdown

* test(cli): update escaped empty object expectations

* style(cli): format the literal empty-object Markdown expectation

* test(mcp): assert bundle path issues by field

compare_bundles reports each relative path as an invalid_format issue
instead of one joined diagnostic sentence.

* test(flutter): assert ABI selector refusals as structured issues

inspect_dart_aot reports the ABI label as an issue on path abi. The
message is the selector contract, without an abi: prefix.

---------

Co-authored-by: Cursor Agent <cursoragent@cursor.com>
2026-10-29 20:07:17 +08:00
c88e1b0b43 feat(guidance): search installed workflow sections (#6996)
* feat(guidance): search bundled REA workflow guidance

* fix(guidance): address review findings

* test(guidance): fix boundary and dispatcher coverage

* test(setup): use supported doctor fixture runtime

* fix(guidance): resolve CI conformance, coverage, and review findings

* fix(guidance): own complete requests through shutdown

* test(guidance): bound lifecycle gates and join failed work

---------

Co-authored-by: Deepak-Kambala <deepakkambala07@gmail.com>
Co-authored-by: gensokyo-dev <342580529+gensokyo-dev@users.noreply.github.com>
2026-10-29 16:47:10 +08:00
STDquantum f25d1e3e9f fix(cli): preserve Amp MCP registration settings (#7995)
* fix(cli): preserve Amp registration environment and report failures (#7538, #7536)

* fix(cli): normalize equals-form mcp add agents before Incur parses them (#7538)

* fix(cli): remove the Amp settings backup after a verified registration (#7538)

* fix(cli): secure Amp registration backups

* test(cli): cover Amp registration backup permissions

* fix(cli): retain Amp registration recovery backups

* fix(cli): create private Amp recovery copies

* test(cli): fix Amp backup assertion typing

* fix(cli): preserve typed Amp backup failures

* fix(cli): handle Amp backup cleanup failures
2026-10-29 15:23:42 +08:00
RRFZ 4fbce5c122 fix(cli): reject empty IPS and PE import targets before resolution (#7963)
inspect-apple-ips and inspect-pe-imports were the two commands in the
binary diagnostics group whose positional target was still a plain
string. An empty argument passed CLI validation, was resolved to the
working directory, and failed later as a non-file input, unlike their
siblings (inspect-elf-notes, inspect-pe-certificates and others) that
already reject it at validation.

Declare both targets with the shared nonempty, NUL-free local path
schema the rest of the file uses. Explicit "." is unchanged.

Fixes #7421
2026-10-29 13:43:25 +08:00
morluto 419a211304 fix(cli): preserve caller paths in format inspections (#7855)
* fix(cli): preserve caller paths in format inspections

* fix(cli): retain caller path on partial evidence

* test(cli): preserve caller path in adapter parity checks

* test(rust): account for retained caller path

* fix(wasm): compare shared cli and mcp evidence
2026-10-29 09:26:22 +08:00
RRFZ 6db024dc96 fix(cli): reject empty native and managed targets before resolution (#7956)
Local file commands in the core binary, native, managed and native-tool
CLI groups declared their positional target as a plain string. An empty
argument therefore reached path admission, where it resolved to the
working directory, as docs/cli.md says it never should.

Declare those targets with the shared nonempty, NUL-free local path
schema already used by analyze, so the CLI rejects them as a
VALIDATION_ERROR naming the field before any analysis runner is called.
Explicit "." is unchanged.

Fixes #7436
Fixes #7404
2026-10-29 08:31:12 +08:00
morluto 5147b6e306 fix(environment)!: attribute source errors to caller fields (#7900)
* fix(environment): attribute source file errors to caller fields

* style(environment): format source admission tests
2026-10-29 08:12:09 +08:00
morluto c7722c8eeb fix(cli): honor token controls for builtin documents (#7897) 2026-10-29 08:11:19 +08:00
morluto 3a512303d9 fix(cli)!: refuse lossy text output (#7852)
* fix(cli)!: refuse lossy text output

* fix(cli): retain failure identity on text refusal

* fix(cli): check failed TOON token windows

* test(cli): bound keyed archive case duration
2026-10-29 08:09:49 +08:00
Wenyu Chiou 3142f7b0dd fix(adb): align CLI selector schemas with canonical inputs (#7722)
* fix(adb): align CLI selector schemas with canonical inputs

Reuse canonical selector constraints for ADB CLI admission and cover schema, parser, and inert provider boundaries. Independent source review approved tree bc722f8d1b1f8d014be29533e6845c6f897d5918; full contribution checks remain pending.

* test(adb): expect CLI serial validation refusal

Independent review approved staged diff 35418e6994339af838b490be51278fd41b9f8e3e. Focused serial refusal test, lint, and formatting passed with existing dependencies.

* test(adb): assert CLI selector validation stage

Independent review approved staged diff a1164a8dcf1df1f0d60323d7a53a69ee2bfdffeb. Focused dispatch tests, targeted lint and formatting passed using existing dependencies.

* fix(adb): retain safe selector validation constraints

Independent review: review_ci_delta APPROVE for diff 18748a3b4b112dc96b95f7c1099bd479e1d1587b. Focused tests, typecheck and targeted lint passed; the aggregate check remains limited by a matching baseline Knip finding.
2026-10-29 07:44:43 +08:00
morluto f9acfdcf49 fix(cli): retain committed evidence receipts on output failure (#7906) 2026-10-29 05:11:02 +08:00
morluto 76c7698ac9 fix(cli)!: preserve native value input diagnostics (#7889) 2026-10-29 05:10:28 +08:00
morluto e03ff93913 fix(frida): retain selected discovery endpoint on failure (#7892) 2026-10-29 05:04:53 +08:00
gensokyo-devandEntrpi 37827af591 feat(artifacts): compare inventories from Evidence sources (#7869)
* feat(artifacts): compare artifacts by Evidence reference and from the CLI

compare_artifacts made agents send back the complete inventory Evidence
that REA already retains, and the CLI had no artifact comparison.

Each side of compare_artifacts now takes exactly one of: complete inline
Evidence (unchanged), {kind: "retained-evidence", evidence_id}, or
{kind: "evidence-file", path, evidence_id?}. The two references are the
sources inspect_analysis_view accepts; both tools now compose one
definition in evidenceReference.ts. A summary still resolves to its exact
retained parent, and every source form gives the same comparison Evidence.
An unresolvable retained reference is refused with a typed missing
reference error.

The application layer owns source resolution and the comparison Evidence,
so MCP and the new `rea compare-artifacts` command share one workflow.
readEvidenceFileSource reports bundle-selection refusals at the caller's
own field path.

* refactor(artifacts): resolve compare_artifacts sides like compare_functions

compare_functions, compare_wasm_interfaces and the JavaScript application
comparisons name each side with evidenceInputSchema and resolve it with
resolvePairedEvidenceRequest. compare_artifacts reached the same result
for inline and retained sides through its own dispatch.

evidenceSourceInputSchema now extends evidenceInputSchema with the
Evidence-file reference, and resolvePairedEvidenceSources sends inline and
retained sides to the same resolveEvidenceInput and file sides to the
shared Evidence file reader. compare_artifacts uses both, so the forms it
shares with compare_functions are parsed and resolved by one owner. The
advertised input schema is unchanged.

* docs(cli): point rea compare to compare-artifacts for inventory contents

rea compare (compare_bundles) compares records by Evidence identity and
explicit pairs and never reads artifact contents, so two build
inventories stay unresolved there. Its help and the CLI guide now name
compare-artifacts for that comparison.

* fix(artifacts): resolve summary parents within Evidence source bundles

* perf(evidence): reuse file-owned immutable authentication proofs

* test(evidence): inject failures at both authentication boundaries

---------

Co-authored-by: Entrpi <entrpi@proton.me>
2026-10-29 03:12:03 +08:00
morluto 60ab4da329 fix(cli): correct completion options and setup guidance (#7851)
* fix(cli): align MCP doctor completion with its options

* fix(cli): explain zsh completion initialization

* fix(cli): include launcher timing in doctor completion

* style(cli): format doctor completion schema
2026-10-29 01:28:04 +08:00
gensokyo-dev c77735fa83 fix(setup)!: bind managed registrations to selected installation
Use one command owner for setup, client writers, Gemini policy and CLI defaults.
Migrate recognized runner registrations with backups and remove runner prewarm.
Retain unknown identities and exercise real offline npm, CLI and MCP workflows.

Fixes #7757

BREAKING CHANGE: managed MCP registrations use the selected absolute runtime
and REA entry script, including package-runner cache paths. Keep that installation
available or restore it before setup; unknown registrations require confirmed
manual repair. Setup no longer returns prewarm or emits its progress events.

Assisted-by: Reimu (gensokyo-skills:reimu-incident-triage)
Assisted-by: Kogasa (gensokyo-skills:kogasa-surprise-testing)
Assisted-by: Yukari (gensokyo-skills:yukari-boundary-analysis)
2026-10-28 11:34:28 +00:00
gensokyo-dev 3b242491a4 fix(cli): attribute keyed archive errors to archive argument (#7731)
* fix(cli): attribute keyed archive errors to archive argument

* test(cli): assert input-error projection reference reuse
2026-10-28 16:48:20 +08:00
gensokyo-dev 6a226bd092 fix(apple): validate keyed archive selectors consistently (#7728) 2026-10-28 16:01:17 +08:00
gensokyo-dev 0e4b806db1 fix(cli): preserve missing-selection Markdown token windows (#7726) 2026-10-28 15:23:00 +08:00
gensokyo-dev a0a1962e06 fix(cli): validate byte queries before opening targets (#7723) 2026-10-28 15:00:01 +08:00
5ae77656e7 feat(workflows): expose guided prompts through CLI and MCP (#6995)
* feat(workflows): expose guided prompts through CLI and MCP

* fix(workflows): address guided workflow review findings

* fix(workflows): preserve scoped contracts and actionable validation

* test(workflows): allow bounded CLI startup on shared hosts

* test(workflows): audit guidance effects and content provenance

* perf(workflows): defer rendering and separate catalog scope

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Co-authored-by: Deepak-Kambala <deepakkambala07@gmail.com>
Co-authored-by: gensokyo-dev <342580529+gensokyo-dev@users.noreply.github.com>
2026-10-28 14:12:39 +08:00
gensokyo-dev 3d5c73f35c fix(cli): retain JSONL parser diagnostics under token counting (#7705) 2026-10-28 11:48:31 +08:00
aa6f6436c9 feat(cli): add CSV and TSV analysis views (#7254)
* feat(cli): add CSV and TSV analysis views

Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>

* Update tests/boundary/cli/filteredArrayOutput.test.ts

Co-authored-by: greptile-apps[bot] <165735046+greptile-apps[bot]@users.noreply.github.com>

* Update src/cli.ts

Co-authored-by: greptile-apps[bot] <165735046+greptile-apps[bot]@users.noreply.github.com>

* fix(cli): address delimited export review feedback

* fix(cli): format delimited output block in cliResultOutput

* fix(cli): retain delimited view uncertainty and align completions

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Co-authored-by: Copilot <223556219+Copilot@users.noreply.github.com>
Co-authored-by: greptile-apps[bot] <165735046+greptile-apps[bot]@users.noreply.github.com>
Co-authored-by: gensokyo-dev <342580529+gensokyo-dev@users.noreply.github.com>
2026-10-28 11:27:40 +08:00
PM baec375c34 fix(cli): validate outline-depth before numeric coercion (#7505)
Fixes morluto/rea#7425

Signed-off-by: pqminh27 <minh8a1hb@gmail.com>
2026-10-28 05:16:49 +08:00