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synced 2026-10-27 18:05:59 +00:00
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Commits
| Author | SHA1 | Date | |
|---|---|---|---|
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4f8cfe86c9 | ||
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fb91d5dd90 |
No files matched your search
@@ -0,0 +1,34 @@
|
||||
ISANTEPLUS_VERSION=v2.3.7
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||||
ISANTEPLUS_DB_VERSION=v2.2.1
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||||
|
||||
# Global
|
||||
TZ=America/Los_Angeles
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||||
RESTART=unless-stopped
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||||
# COMPOSE_PROJECT_NAME="hie-botswana"
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||||
ROOT_URL=uwdigi.org
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||||
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||||
# Traefik
|
||||
VERSION=latest
|
||||
LOG=DEBUG
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||||
|
||||
# ACME DNS-01 challenge
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PROVIDER=route53
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||||
RESOLVER=1.1.1.1:53,8.8.8.8:53
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EMAIL=pmanko@uw.edu
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||||
|
||||
# ISANTEPLUS
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||||
ADMIN_PASSWORD=Admin123
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||||
|
||||
#ISANTEPLUS_DB
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||||
DB_SERVER_NAME=isanteplus-mysql
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||||
DB_HOST_NAME=isanteplus-mysql
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||||
DB_PORT=3306
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||||
DB_ROOT_USER=root
|
||||
DB_ROOT_PASSWORD=debezium
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||||
DB_USER=mysqluser
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||||
DB_PASSWORD=mysqlpw
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||||
DB_NAME=openmrs
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DB_BINLOG_SERVER_ID=223344
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||||
DB_BINLOG_EXPIRE_DAYS=1
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#
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||||
@@ -43,3 +43,6 @@ Navigate to the `HaitiHealthBox` directory on your machine and run the following
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docker-compose up -d
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||||
```
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||||
|
||||
## Step Five: Register instance in Sedish
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||||
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||||
## Step Six: test SHR pipe
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+116
-24
@@ -5,16 +5,58 @@ services:
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||||
# reverse proxy
|
||||
###
|
||||
traefik:
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||||
image: traefik:v2.6.1
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||||
image: traefik:${VERSION}
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||||
container_name: traefik
|
||||
restart: ${RESTART}
|
||||
ports:
|
||||
- "80:80"
|
||||
- "443:443"
|
||||
volumes:
|
||||
- ./certs/:/etc/certs/
|
||||
- ./volume/networking/certs.yml:/etc/traefik/dynamic_conf/certs.yml
|
||||
- /var/run/docker.sock:/var/run/docker.sock
|
||||
- ./volume/traefik/conf.yaml:/conf/conf.yaml
|
||||
- ./volume/traefik/traefik.yaml:/etc/traefik/traefik.yaml
|
||||
- certs:/etc/certs
|
||||
command:
|
||||
- --api.insecure=false
|
||||
- --api.dashboard=true
|
||||
- --providers.docker=true
|
||||
- --providers.docker.exposedbydefault=false
|
||||
- --providers.file.watch=true
|
||||
- --providers.file.directory=/etc/traefik/dynamic_conf
|
||||
- --log.level=${LOG}
|
||||
- --entrypoints.web.address=:80
|
||||
- --entrypoints.web-secure.address=:443
|
||||
- --entrypoints.web.http.redirections.entrypoint.to=web-secure
|
||||
- --entrypoints.web.http.redirections.entrypoint.scheme=https
|
||||
- --serversTransport.insecureSkipVerify=true
|
||||
|
||||
labels:
|
||||
- 'traefik.enable=true'
|
||||
- 'traefik.docker.network=haitihealthbox_local_facility'
|
||||
- "traefik.http.routers.api.rule=Host(`traefik.${ROOT_URL}`)"
|
||||
- "traefik.http.routers.api.service=api@internal"
|
||||
- 'traefik.http.routers.api.tls=true'
|
||||
- 'traefik.http.routers.api.entrypoints=web-secure'
|
||||
networks:
|
||||
- local_facility
|
||||
environment:
|
||||
- TZ
|
||||
|
||||
###
|
||||
# Certs
|
||||
###
|
||||
certbot:
|
||||
image: ghcr.io/i-tech-uw/certbot-route53-cron:pr-2
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||||
container_name: certbot
|
||||
environment:
|
||||
- AWS_ACCESS_KEY_ID
|
||||
- AWS_SECRET_ACCESS_KEY
|
||||
- ROOT_URL=${ROOT_URL-localhost}
|
||||
- EMAIL=${EMAIL-example@email.org}
|
||||
volumes:
|
||||
- certs:/etc/letsencrypt/
|
||||
- letsencrypt:/var/lib/letsencrypt
|
||||
networks:
|
||||
- local_facility
|
||||
|
||||
###
|
||||
# iSantePlus Server
|
||||
@@ -22,10 +64,18 @@ services:
|
||||
isanteplus:
|
||||
container_name: isanteplus
|
||||
hostname: isanteplus
|
||||
image: ghcr.io/isanteplus/docker-isanteplus-server:v2.3.7
|
||||
image: ghcr.io/isanteplus/docker-isanteplus-server:${ISANTEPLUS_VERSION-latest}
|
||||
restart: unless-stopped
|
||||
env_file:
|
||||
- ./isanteplus.env
|
||||
environment:
|
||||
- OMRS_CONFIG_CREATE_TABLES=false
|
||||
- OMRS_CONFIG_ADD_DEMO_DATA=false
|
||||
- OMRS_CONFIG_CONNECTION_URL=jdbc:mysql://${DB_HOST_NAME-isanteplus-mysql}:${DB_PORT-3306}/openmrs?autoReconnect=true
|
||||
- OMRS_CONFIG_HAS_CURRENT_OPENMRS_DATABASE=true
|
||||
- OMRS_JAVA_SERVER_OPTS="-Dfile.encoding=UTF-8 -server -Djava.security.egd=file:/dev/./urandom -Djava.awt.headless=true -Djava.awt.headlesslib=true"
|
||||
- OMRS_CONFIG_CONNECTION_USERNAME=${DB_USER-mysqluser}
|
||||
- OMRS_CONFIG_CONNECTION_PASSWORD=${DB_PASSWORD-mysqlpw}
|
||||
- OMRS_CONFIG_CONNECTION_SERVER=isanteplus-mysql
|
||||
- OMRS_DEV_DEBUG_PORT=1044
|
||||
volumes:
|
||||
- /openmrs/data
|
||||
- ./custom_modules:/custom_modules
|
||||
@@ -39,7 +89,7 @@ services:
|
||||
- local_facility
|
||||
|
||||
isanteplus-mysql:
|
||||
image: ghcr.io/isanteplus/docker-isanteplus-db:v2.2.1
|
||||
image: ghcr.io/isanteplus/docker-isanteplus-db:${ISANTEPLUS_DB_VERSION-latest}
|
||||
command: mysqld --character-set-server=utf8 --collation-server=utf8_general_ci --sql_mode=""
|
||||
restart: unless-stopped
|
||||
container_name: isanteplus-mysql
|
||||
@@ -47,13 +97,13 @@ services:
|
||||
healthcheck:
|
||||
test: "exit 0"
|
||||
environment:
|
||||
- MYSQL_DATABASE=openmrs
|
||||
- MYSQL_ROOT_PASSWORD=debezium
|
||||
- MYSQL_USER=mysqluser
|
||||
- MYSQL_PASSWORD=${IPLUS_DB_PW-mysqlpw}
|
||||
- MYSQL_DATABASE=${DB_NAME-openmrs}
|
||||
- MYSQL_ROOT_PASSWORD=${DB_ROOT_PASSWORD-debezium}
|
||||
- MYSQL_USER=${DB_USER-mysqluser}
|
||||
- MYSQL_PASSWORD=${DB_PASSWORD-mysqlpw}
|
||||
- MYSQL_ROOT_HOST=% # Allow docker containers to connect to mysql
|
||||
volumes:
|
||||
- ./mysql.cnf:/etc/mysql/conf.d/custom.cnf # mysql config preconfigured to allow binlog/debezium
|
||||
- ./volume/database/isanteplus/mysql.cnf:/etc/mysql/conf.d/custom.cnf # mysql config preconfigured to allow binlog/debezium
|
||||
- /var/lib/mysql
|
||||
networks:
|
||||
- local_facility
|
||||
@@ -66,12 +116,12 @@ services:
|
||||
volumes:
|
||||
- ./configs/streaming-pipeline/config.json:/deployments/config.json
|
||||
# data is the directory which you want to persist the generated parquet files
|
||||
# - ./configs/streaming-pipeline/parquet:/tmp
|
||||
- ./tmp:/tmp
|
||||
environment:
|
||||
- OPENMRS_URL=http://isanteplus:8080/openmrs
|
||||
- OPENMRS_USERNAME=admin
|
||||
- OPENMRS_PASSWORD=${IPLUS_ADMIN_PW-Admin123}
|
||||
- SINK_URL=https://openhim-ssl.sedish-haiti.org/SHR/fhir
|
||||
- SINK_URL=https://openhim.sedish-haiti.org/SHR/fhir
|
||||
- SINK_USERNAME=${OPENHIM_STREAMING_CLIENT-streaming}
|
||||
- SINK_PASSWORD=${OPENHIM_STREAMING_PW-streaming}
|
||||
- JDBC_FETCH_SIZE=10000
|
||||
@@ -79,7 +129,7 @@ services:
|
||||
- JDBC_INITIAL_POOL_SIZE=10
|
||||
- JDBC_DRIVER_CLASS=com.mysql.cj.jdbc.Driver
|
||||
# the 2 variable below should be same as volume mappings above
|
||||
- PARQUET_PATH=
|
||||
- PARQUET_PATH=/tmp
|
||||
- FHIR_DEBEZIUM_CONFIG_PATH=/deployments/config.json
|
||||
###
|
||||
# OpenHIM
|
||||
@@ -99,20 +149,54 @@ services:
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||||
timeout: 20s
|
||||
retries: 2
|
||||
volumes:
|
||||
- ./configs/openhim/healthcheck.js:/healthcheck.js
|
||||
ports:
|
||||
- 5000
|
||||
- 5001
|
||||
- 8090:8080
|
||||
- ./volume/openhim/healthcheck.js:/healthcheck.js
|
||||
- ./volume/openhim/config.json:/app/config/default.json
|
||||
- certs:/etc/certs
|
||||
networks:
|
||||
- local_facility
|
||||
ports:
|
||||
- 8090:8080
|
||||
- 5000:5000
|
||||
- 5001:5001
|
||||
labels:
|
||||
- 'traefik.enable=true'
|
||||
- 'traefik.docker.network=haitihealthbox_local_facility'
|
||||
|
||||
- 'traefik.http.services.openhim-api.loadbalancer.server.port=8080'
|
||||
- 'traefik.http.services.openhim-api.loadbalancer.server.scheme=https'
|
||||
- 'traefik.http.routers.openhim-api.service=openhim-api'
|
||||
- 'traefik.http.routers.openhim-api.tls=true'
|
||||
- 'traefik.http.routers.openhim-api.entrypoints=web-secure'
|
||||
- 'traefik.http.routers.openhim-api.rule=Host(`openhim-api.${ROOT_URL}`)'
|
||||
|
||||
- 'traefik.http.services.openhim-ssl.loadbalancer.server.port=5000'
|
||||
- 'traefik.http.services.openhim-ssl.loadbalancer.server.scheme=https'
|
||||
- 'traefik.http.routers.openhim-ssl.service=openhim-ssl'
|
||||
- 'traefik.http.routers.openhim-ssl.tls=true'
|
||||
- 'traefik.http.routers.openhim-ssl.entrypoints=web-secure'
|
||||
- 'traefik.http.routers.openhim-ssl.rule=Host(`${ROOT_URL}`) && PathPrefix(`/openhim-ssl`)'
|
||||
- 'traefik.http.routers.openhim-ssl.middlewares=openhim-ssl'
|
||||
- 'traefik.http.middlewares.openhim-ssl.stripprefix.prefixes=/openhim-ssl'
|
||||
- 'traefik.http.middlewares.openhim-ssl.stripprefix.forceSlash=false'
|
||||
|
||||
- 'traefik.http.services.openhim-http.loadbalancer.server.port=5001'
|
||||
- 'traefik.http.services.openhim-http.loadbalancer.server.scheme=http'
|
||||
- 'traefik.http.routers.openhim-http.service=openhim-http'
|
||||
- 'traefik.http.routers.openhim-http.tls=false'
|
||||
- 'traefik.http.routers.openhim-http.entrypoints=web'
|
||||
- 'traefik.http.routers.openhim-http.rule=Host(`${ROOT_URL}`) && PathPrefix(`/openhim-http`)'
|
||||
- 'traefik.http.routers.openhim-http.middlewares=openhim-http'
|
||||
- 'traefik.http.middlewares.openhim-http.stripprefix.prefixes=/openhim-http'
|
||||
- 'traefik.http.middlewares.openhim-http.stripprefix.forceSlash=false'
|
||||
|
||||
|
||||
openhim-console:
|
||||
container_name: openhim-console
|
||||
hostname: openhim-console
|
||||
image: jembi/openhim-console:latest
|
||||
restart: unless-stopped
|
||||
volumes:
|
||||
- ./volume/openhim/console.json:/usr/share/nginx/html/config/default.json
|
||||
- ./volume/openhim/console.json:/usr/share/nginx/html/config/default.json
|
||||
healthcheck:
|
||||
test: "curl -sS http://openhim-console || exit 1"
|
||||
interval: 10s
|
||||
@@ -122,6 +206,12 @@ services:
|
||||
- 3000:80
|
||||
networks:
|
||||
- local_facility
|
||||
labels:
|
||||
- 'traefik.enable=true'
|
||||
- 'traefik.docker.network=haitihealthbox_local_facility'
|
||||
- 'traefik.http.routers.openhim-console.tls=true'
|
||||
- 'traefik.http.routers.openhim-console.entrypoints=web-secure'
|
||||
- 'traefik.http.routers.openhim-console.rule=Host(`${ROOT_URL}`)'
|
||||
# Loads Default OpenHIM Config
|
||||
openhim-config:
|
||||
container_name: openhim-config
|
||||
@@ -175,11 +265,11 @@ services:
|
||||
|
||||
oe.openelis.org:
|
||||
container_name: openelisglobal-webapp
|
||||
image: ghcr.io/i-tech-uw/openelis-global-2:develop
|
||||
image: ghcr.io/i-tech-uw/openelis-global-2@sha256:abc0916a3c61176571eb2e771cfeb399d0f29c9e02857879d0e12471d3ebf8f3
|
||||
depends_on:
|
||||
- database
|
||||
ports:
|
||||
- "8095:8080"
|
||||
#- "8095:8080"
|
||||
- "8443:8443"
|
||||
restart: always
|
||||
environment:
|
||||
@@ -231,6 +321,8 @@ secrets:
|
||||
volumes:
|
||||
db-data:
|
||||
cert-volume:
|
||||
certs:
|
||||
letsencrypt:
|
||||
|
||||
networks:
|
||||
local_facility:
|
||||
@@ -1,11 +0,0 @@
|
||||
OMRS_JAVA_MEMORY_OPTS="-Xmx8192m -Xms4096m -XX:NewSize=512m"
|
||||
OMRS_CONFIG_CONNECTION_SERVER=isanteplus-mysql
|
||||
OMRS_CONFIG_CREATE_DATABASE_USER=false
|
||||
OMRS_CONFIG_CREATE_TABLES=false
|
||||
OMRS_CONFIG_ADD_DEMO_DATA=false
|
||||
OMRS_CONFIG_CONNECTION_URL=jdbc:mysql://isanteplus-mysql:3306/openmrs?autoReconnect=true
|
||||
OMRS_CONFIG_HAS_CURRENT_OPENMRS_DATABASE=true
|
||||
OMRS_JAVA_SERVER_OPTS="-Dfile.encoding=UTF-8 -server -Djava.security.egd=file:/dev/./urandom -Djava.awt.headless=true -Djava.awt.headlesslib=true"
|
||||
OMRS_CONFIG_CONNECTION_USERNAME=mysqluser
|
||||
OMRS_CONFIG_CONNECTION_PASSWORD=${IPLUS_DB_PW}
|
||||
OMRS_DEV_DEBUG_PORT=1044
|
||||
@@ -0,0 +1,246 @@
|
||||
{
|
||||
"debeziumConfigurations": {
|
||||
"databaseServerName" : "$DB_SERVER_NAME",
|
||||
"databaseHostName" : "$DB_HOST_NAME",
|
||||
"databaseServerId" : "$DB_SERVER_ID",
|
||||
"databasePort" : "$DB_PORT",
|
||||
"databaseUser" : "$DB_USER",
|
||||
"databasePassword" : "$DB_PASSWORD",
|
||||
"databaseName" : "$DB_NAME",
|
||||
"databaseOffsetStorage" : "data/offset.dat",
|
||||
"databaseHistory" : "data/dbhistory.dat",
|
||||
"snapshotMode" : "schema_only"
|
||||
},
|
||||
"eventConfigurations": {
|
||||
"location": {
|
||||
"enabled": "false",
|
||||
"title": "Location",
|
||||
"parentTable": "location",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/location/{uuid}?v=full",
|
||||
"fhir": "/Location/{uuid}"
|
||||
}
|
||||
},
|
||||
"concept": {
|
||||
"enabled": "false",
|
||||
"title": "Concept",
|
||||
"parentTable": "concept",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/concept/{uuid}?v=full"
|
||||
}
|
||||
},
|
||||
"cohort": {
|
||||
"enabled": "true",
|
||||
"title": "Cohort",
|
||||
"parentTable": "cohort",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/cohort/{uuid}?v=full",
|
||||
"fhir": "/Group/{uuid}"
|
||||
}
|
||||
},
|
||||
"visittype": {
|
||||
"enabled": "false",
|
||||
"title": "Visit Type",
|
||||
"parentTable": "visittype",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/visittype/{uuid}?v=full"
|
||||
}
|
||||
},
|
||||
"person_address": {
|
||||
"enabled": "false",
|
||||
"title": "PersonAddress",
|
||||
"parentTable": "person_address",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/person/{parent-uuid}/address/{uuid}?v=full"
|
||||
}
|
||||
},
|
||||
"person_name": {
|
||||
"enabled": "false",
|
||||
"title": "PersonName",
|
||||
"parentTable": "person_name",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/person/{parent-uuid}/name/{uuid}?v=full"
|
||||
}
|
||||
},
|
||||
"patient_identifier": {
|
||||
"enabled": "false",
|
||||
"title": "PatientIdentifier",
|
||||
"parentTable": "patient_identifier",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/patient/{parent-uuid}/identifier/{uuid}?v=full"
|
||||
}
|
||||
},
|
||||
"person_attribute": {
|
||||
"enabled": "false",
|
||||
"title": "PersonAttribute",
|
||||
"parentTable": "person_attribute",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/person/{parent-uuid}/attribute/{uuid}?v=full"
|
||||
}
|
||||
},
|
||||
"person": {
|
||||
"enabled": "true",
|
||||
"title": "Person",
|
||||
"parentTable": "person",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/person/{uuid}?v=full",
|
||||
"fhir": "/Person/{uuid}"
|
||||
}
|
||||
},
|
||||
"provider": {
|
||||
"enabled": "true",
|
||||
"title": "Provider",
|
||||
"parentTable": "provider",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/provider/{uuid}?v=full",
|
||||
"fhir": "/Provider/{uuid}"
|
||||
}
|
||||
},
|
||||
"user": {
|
||||
"enabled": "false",
|
||||
"title": "User",
|
||||
"parentTable": "user",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/user/{uuid}?v=full"
|
||||
}
|
||||
},
|
||||
"patient": {
|
||||
"enabled": "true",
|
||||
"title": "Patient",
|
||||
"parentTable": "person",
|
||||
"parentForeignKey": "person_id",
|
||||
"childPrimaryKey":"patient_id",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/patient/{uuid}?v=full",
|
||||
"fhir": "/Patient/{uuid}"
|
||||
}
|
||||
},
|
||||
"relationship": {
|
||||
"enabled": "true",
|
||||
"title": "Relationship",
|
||||
"parentTable": "relationship",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/relationship/{uuid}?v=full",
|
||||
"fhir": "/Relationship/{uuid}"
|
||||
}
|
||||
},
|
||||
"drug": {
|
||||
"enabled": "true",
|
||||
"title": "Drug",
|
||||
"parentTable": "drug",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/drug/{uuid}?v=full",
|
||||
"fhir": "/Drug/{uuid}"
|
||||
}
|
||||
},
|
||||
"allergy": {
|
||||
"enabled": "true",
|
||||
"title": "Allergy",
|
||||
"parentTable": "allergy",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/allergy/{uuid}?v=full",
|
||||
"fhir": "/AllergyIntolerance/{uuid}"
|
||||
}
|
||||
},
|
||||
"form":{
|
||||
"enabled": "true",
|
||||
"title": "Form",
|
||||
"parentTable": "form",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/form/{uuid}?v=full"
|
||||
}
|
||||
},
|
||||
"order": {
|
||||
"enabled": "true",
|
||||
"title": "Order",
|
||||
"parentTable": "order",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/order/{uuid}?v=full",
|
||||
"fhir": "/Order/{uuid}"
|
||||
}
|
||||
},
|
||||
"drug_order":{
|
||||
"enabled": "true",
|
||||
"title": "DrugOrder",
|
||||
"parentTable": "drug_order",
|
||||
"parentForeignKey": "order_id",
|
||||
"childPrimaryKey":"order_id",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/drug_order/{uuid}?v=full",
|
||||
"fhir": "/MedicationRequest/{uuid}"
|
||||
}
|
||||
},
|
||||
"test_order": {
|
||||
"enabled": "true",
|
||||
"title": "TestOrder",
|
||||
"parentTable": "test_order",
|
||||
"parentForeignKey": "order_id",
|
||||
"childPrimaryKey":"order_id",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/test_order/{uuid}?v=full",
|
||||
"fhir": "/ProcedureRequest/{uuid}"
|
||||
}
|
||||
},
|
||||
"obs": {
|
||||
"enabled": "true",
|
||||
"title": "Observation",
|
||||
"parentTable": "obs",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/obs/{uuid}?v=full",
|
||||
"fhir": "/Observation/{uuid}"
|
||||
}
|
||||
},
|
||||
"encounter":{
|
||||
"enabled": "true",
|
||||
"title": "Encounter",
|
||||
"parentTable": "encounter",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/encounter/{uuid}?v=full",
|
||||
"fhir": "/Encounter/{uuid}"
|
||||
}
|
||||
},
|
||||
"visit":{
|
||||
"enabled": "false",
|
||||
"title": "Visit",
|
||||
"parentTable": "visit",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/visit/{uuid}?v=full",
|
||||
"fhir": "/Encounter/{uuid}"
|
||||
}
|
||||
},
|
||||
"program":{
|
||||
"enabled": "true",
|
||||
"title": "Program",
|
||||
"parentTable": "program",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/program/{uuid}?v=full",
|
||||
"fhir": "/Program/{uuid}"
|
||||
}
|
||||
},
|
||||
"programenrollment":{
|
||||
"enabled": "true",
|
||||
"title": "Program Enrollment",
|
||||
"parentTable": "programenrollment",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/programenrollment/{uuid}?v=full",
|
||||
"fhir": "/Programenrollment/{uuid}"
|
||||
}
|
||||
},
|
||||
"privilege":{
|
||||
"enabled": "true",
|
||||
"title": "Privilege",
|
||||
"parentTable": "privilege",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/v1/privilege/{uuid}?v=full"
|
||||
}
|
||||
},
|
||||
"audit_message":{
|
||||
"enabled": "true",
|
||||
"title": "AuditMessage",
|
||||
"parentTable": "audit_message",
|
||||
"linkTemplates": {
|
||||
"rest": "/ws/rest/sync2/messages/{uuid}"
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
@@ -0,0 +1,62 @@
|
||||
# Copyright 2020 Google LLC
|
||||
#
|
||||
# Licensed under the Apache License, Version 2.0 (the "License");
|
||||
# you may not use this file except in compliance with the License.
|
||||
# You may obtain a copy of the License at
|
||||
#
|
||||
# http://www.apache.org/licenses/LICENSE-2.0
|
||||
#
|
||||
# Unless required by applicable law or agreed to in writing, software
|
||||
# distributed under the License is distributed on an "AS IS" BASIS,
|
||||
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
# See the License for the specific language governing permissions and
|
||||
# limitations under the License.
|
||||
|
||||
# This is a pre-configuration for Docker MySQL to allow BinLog and replication necessary configurations for Debezium to work
|
||||
# see ./openmrs-compose.yaml
|
||||
# REF: https://github.com/debezium/debezium/blob/master/debezium-connector-mysql/src/test/docker/server-gtids/my.cnf
|
||||
|
||||
# For advice on how to change settings please see
|
||||
# http://dev.mysql.com/doc/refman/5.7/en/server-configuration-defaults.html
|
||||
|
||||
[mysqld]
|
||||
#
|
||||
# Remove leading # and set to the amount of RAM for the most important data
|
||||
# cache in MySQL. Start at 70% of total RAM for dedicated server, else 10%.
|
||||
# innodb_buffer_pool_size = 128M
|
||||
#
|
||||
# Remove leading # to turn on a very important data integrity option: logging
|
||||
# changes to the binary log between backups.
|
||||
# log_bin
|
||||
#
|
||||
# Remove leading # to set options mainly useful for reporting servers.
|
||||
# The server defaults are faster for transactions and fast SELECTs.
|
||||
# Adjust sizes as needed, experiment to find the optimal values.
|
||||
# join_buffer_size = 128M
|
||||
# sort_buffer_size = 2M
|
||||
# read_rnd_buffer_size = 2M
|
||||
skip-host-cache
|
||||
skip-name-resolve
|
||||
#datadir=/var/lib/mysql
|
||||
#socket=/var/lib/mysql/mysql.sock
|
||||
#secure-file-priv=/var/lib/mysql-files
|
||||
user=mysql
|
||||
|
||||
# Disabling symbolic-links is recommended to prevent assorted security risks
|
||||
symbolic-links=0
|
||||
|
||||
#log-error=/var/log/mysqld.log
|
||||
#pid-file=/var/run/mysqld/mysqld.pid
|
||||
|
||||
# ----------------------------------------------
|
||||
# Enable the binlog for replication & CDC
|
||||
# ----------------------------------------------
|
||||
|
||||
# Enable binary replication log and set the prefix, expiration, and log format.
|
||||
# The prefix is arbitrary, expiration can be short for integration tests but would
|
||||
# be longer on a production system. Row-level info is required for ingest to work.
|
||||
# Server ID is required, but this will vary on production systems
|
||||
server-id = $DB_BINLOG_SERVER_ID
|
||||
log_bin = mysql-bin
|
||||
expire_logs_days = $DB_BINLOG_EXPIRE_DAYS
|
||||
binlog_format = row
|
||||
@@ -0,0 +1,11 @@
|
||||
tls:
|
||||
certificates:
|
||||
- certFile: /etc/certs/live/default/fullchain.pem
|
||||
keyFile: /etc/certs/live/default/privkey.pem
|
||||
stores:
|
||||
- default
|
||||
stores:
|
||||
default:
|
||||
defaultCertificate:
|
||||
certFile: /etc/certs/live/default/fullchain.pem
|
||||
keyFile: /etc/certs/live/default/privkey.pem
|
||||
@@ -0,0 +1,155 @@
|
||||
{
|
||||
"bindAddress": "0.0.0.0",
|
||||
"mongo": {
|
||||
"url": "mongodb://localhost/openhim",
|
||||
"atnaUrl": "mongodb://localhost/openhim",
|
||||
"connectionOptions": {},
|
||||
"openHIMApiReadPreference": "primaryPreferred",
|
||||
"openHIMApiWriteConcern": 1,
|
||||
"openHIMApiReadConcern": "local"
|
||||
},
|
||||
"logger": {
|
||||
"level": "info",
|
||||
"logToDB": true,
|
||||
"capDBLogs": true,
|
||||
"capSize": 10000000
|
||||
},
|
||||
"mongoLogger": {
|
||||
"options": {
|
||||
"w": 0,
|
||||
"useNewUrlParser": true
|
||||
}
|
||||
},
|
||||
"router": {
|
||||
"externalHostname": "uwdigi.org",
|
||||
"httpPort": 5001,
|
||||
"httpsPort": 5000,
|
||||
"timeout": 60000
|
||||
},
|
||||
"bodyCull":{
|
||||
"enabled":true,
|
||||
"pollPeriodMins": 60
|
||||
},
|
||||
"api": {
|
||||
"enabled": true,
|
||||
"protocol": "https",
|
||||
"port": 8080,
|
||||
"authWindowSeconds": 10,
|
||||
"maxBodiesSizeMB": 15,
|
||||
"maxPayloadSizeMB": 50,
|
||||
"truncateSize": 15000,
|
||||
"truncateAppend": "\n[truncated ...]",
|
||||
"authenticationTypes": ["basic", "token"]
|
||||
},
|
||||
"rerun": {
|
||||
"httpPort": 7786,
|
||||
"host": "localhost",
|
||||
"processor": {
|
||||
"enabled": false,
|
||||
"pollPeriodMillis": 2000
|
||||
},
|
||||
"taskTransactionsLength": 50,
|
||||
"activeConcurrentTasks": 3
|
||||
},
|
||||
"tcpAdapter": {
|
||||
"httpReceiver": {
|
||||
"httpPort": 7787,
|
||||
"host": "localhost"
|
||||
}
|
||||
},
|
||||
"polling": {
|
||||
"enabled": false,
|
||||
"pollingPort": 7788,
|
||||
"host": "localhost"
|
||||
},
|
||||
"authentication": {
|
||||
"enableMutualTLSAuthentication": true,
|
||||
"enableBasicAuthentication": true,
|
||||
"enableCustomTokenAuthentication": true,
|
||||
"enableJWTAuthentication": false,
|
||||
"jwt": {
|
||||
"secretOrPublicKey": "",
|
||||
"algorithms": "",
|
||||
"audience": "",
|
||||
"issuer": ""
|
||||
}
|
||||
},
|
||||
"email": {
|
||||
"fromAddress": "address@example.com",
|
||||
"nodemailer": {
|
||||
"service": "Gmail",
|
||||
"auth": {
|
||||
"user": "user@gmail.com",
|
||||
"pass": "password"
|
||||
}
|
||||
}
|
||||
},
|
||||
"smsGateway": {
|
||||
"provider": "clickatell",
|
||||
"config": {
|
||||
"user": "user",
|
||||
"pass": "pass",
|
||||
"apiID": "apiID"
|
||||
}
|
||||
},
|
||||
"alerts": {
|
||||
"enableAlerts": true,
|
||||
"pollPeriodMinutes": 1,
|
||||
"himInstance": "Haiti Health Box OpenHIM",
|
||||
"consoleURL": "http://localhost:9000"
|
||||
},
|
||||
"reports": {
|
||||
"enableReports": false,
|
||||
"dailyReportAt": "0 7 * * *",
|
||||
"weeklyReportAt": "0 7 * * 1",
|
||||
"utcOffset": null
|
||||
},
|
||||
"events": {
|
||||
"enableTSNormalization": true
|
||||
},
|
||||
"newUserExpiry": {
|
||||
"duration": 7,
|
||||
"durationType": "days"
|
||||
},
|
||||
"userPasswordResetExpiry": {
|
||||
"duration": 1,
|
||||
"durationType": "hours"
|
||||
},
|
||||
"auditing": {
|
||||
"servers": {
|
||||
"udp": {
|
||||
"enabled": false,
|
||||
"port": 5050
|
||||
},
|
||||
"tls": {
|
||||
"enabled": false,
|
||||
"port": 5051
|
||||
},
|
||||
"tcp": {
|
||||
"enabled": false,
|
||||
"port": 5052
|
||||
}
|
||||
},
|
||||
"auditEvents": {
|
||||
"interface": "internal",
|
||||
"host": "localhost",
|
||||
"port": 5051,
|
||||
"auditSourceID": "OpenHIM"
|
||||
}
|
||||
},
|
||||
"caching": {
|
||||
"enabled": true,
|
||||
"refreshMillis": 1000
|
||||
},
|
||||
"tlsClientLookup": {
|
||||
"type": "in-chain"
|
||||
},
|
||||
"agenda": {
|
||||
"startupDelay": 500
|
||||
},
|
||||
"certificateManagement": {
|
||||
"watchFSForCert": true,
|
||||
"certPath": "/etc/certs/live/default/fullchain.pem",
|
||||
"keyPath": "/etc/certs/live/default/privkey.pem"
|
||||
}
|
||||
}
|
||||
@@ -0,0 +1,14 @@
|
||||
{
|
||||
"version": "1.14.4",
|
||||
"minimumCoreVersion": "5.0.0",
|
||||
"protocol": "https",
|
||||
"host": "52.11.216.56",
|
||||
"hostPath": "",
|
||||
"port": 8090,
|
||||
"title": "Haiti Health Box Console",
|
||||
"footerTitle": "Haiti Health Box Console",
|
||||
"footerPoweredBy": "<a href='http://openhim.org/' target='_blank'>Powered by OpenHIM</a>",
|
||||
"loginBanner": "",
|
||||
"mediatorLastHeartbeatWarningSeconds": 60,
|
||||
"mediatorLastHeartbeatDangerSeconds": 120
|
||||
}
|
||||
@@ -0,0 +1,25 @@
|
||||
var http = require("https");
|
||||
|
||||
var options = {
|
||||
host : "0.0.0.0",
|
||||
port : "8080",
|
||||
timeout : 1000,
|
||||
rejectUnauthorized: false
|
||||
};
|
||||
|
||||
var request = http.request(options, (res) => {
|
||||
console.log(`STATUS: ${res.statusCode}`);
|
||||
if (res.statusCode == 200 || res.statusCode == 401) {
|
||||
process.exit(0);
|
||||
}
|
||||
else {
|
||||
process.exit(1);
|
||||
}
|
||||
});
|
||||
|
||||
request.on('error', function(err) {
|
||||
console.log('ERROR');
|
||||
process.exit(1);
|
||||
});
|
||||
|
||||
request.end();
|
||||
@@ -1,19 +1,85 @@
|
||||
{
|
||||
"Users": [
|
||||
{
|
||||
"groups": [
|
||||
"admin"
|
||||
],
|
||||
"firstname": "Super",
|
||||
"surname": "User",
|
||||
"email": "root@openhim.org",
|
||||
"passwordAlgorithm": "sha512",
|
||||
"passwordHash": "3ffa5a209fad0151388a1fc0eb2d93cfb95648c38a79ee19b8c19811ee9256a49dfc929afd1f81f35533553044d2fc19921939f9b53ef5024f9ae0486aecca05",
|
||||
"passwordSalt": "b9bce89f512c986981512a91a9eeb5ef",
|
||||
"expiry": null,
|
||||
"locked": false,
|
||||
"tokenType": null,
|
||||
"token": null
|
||||
}
|
||||
]
|
||||
"Users": [
|
||||
{
|
||||
"groups": [
|
||||
"admin"
|
||||
],
|
||||
"firstname": "Super",
|
||||
"surname": "User",
|
||||
"email": "root@openhim.org",
|
||||
"passwordAlgorithm": "sha512",
|
||||
"passwordHash": "e12ea7a5468925ab2b6d839e5b0566c8d8e68d9dd48241282ec1c448c0b11386b499be64011c88060b241ed5a143fea90992dabb0d91a334daecd96e20156c24",
|
||||
"passwordSalt": "5f49ab7df7fac0fd7860d3b1be95cbf4",
|
||||
"expiry": null,
|
||||
"locked": false,
|
||||
"tokenType": null,
|
||||
"token": null
|
||||
}
|
||||
],
|
||||
"Clients": [],
|
||||
"Channels": [
|
||||
{
|
||||
"methods": [
|
||||
"GET",
|
||||
"POST",
|
||||
"DELETE",
|
||||
"PUT",
|
||||
"OPTIONS",
|
||||
"HEAD",
|
||||
"TRACE",
|
||||
"CONNECT",
|
||||
"PATCH"
|
||||
],
|
||||
"type": "http",
|
||||
"allow": [],
|
||||
"whitelist": [],
|
||||
"authType": "public",
|
||||
"matchContentTypes": [],
|
||||
"properties": [],
|
||||
"txViewAcl": [],
|
||||
"txViewFullAcl": [],
|
||||
"txRerunAcl": [],
|
||||
"status": "enabled",
|
||||
"rewriteUrls": false,
|
||||
"addAutoRewriteRules": true,
|
||||
"autoRetryEnabled": false,
|
||||
"autoRetryPeriodMinutes": 60,
|
||||
"routes": [
|
||||
{
|
||||
"type": "http",
|
||||
"status": "enabled",
|
||||
"forwardAuthHeader": false,
|
||||
"name": "Central FHIR server",
|
||||
"secured": false,
|
||||
"host": "52.11.216.56",
|
||||
"port": 8081,
|
||||
"path": "",
|
||||
"pathTransform": "",
|
||||
"primary": true,
|
||||
"username": "",
|
||||
"password": ""
|
||||
}
|
||||
],
|
||||
"requestBody": true,
|
||||
"responseBody": true,
|
||||
"rewriteUrlsConfig": [],
|
||||
"name": "central fhir server",
|
||||
"description": "Access to the central FHIR server",
|
||||
"pollingSchedule": null,
|
||||
"matchContentRegex": null,
|
||||
"matchContentXpath": null,
|
||||
"matchContentValue": null,
|
||||
"matchContentJson": null,
|
||||
"urlPattern": "^/fhir/.*$",
|
||||
"tcpHost": null,
|
||||
"tcpPort": null,
|
||||
"updatedBy": {
|
||||
"id": "6374bbabba26d10013784480",
|
||||
"name": "Super User"
|
||||
},
|
||||
"alerts": []
|
||||
}
|
||||
],
|
||||
"Mediators": [],
|
||||
"ContactGroups": []
|
||||
}
|
||||
@@ -15,12 +15,12 @@ spring.jpa.hibernate.ddl-auto=update
|
||||
|
||||
org.openelisglobal.fhirstore.uri=http://fhir.openelis.org:8080/fhir/
|
||||
|
||||
org.openelisglobal.remote.source.uri=http://fhir.openelis.org.remote:8080/fhir/
|
||||
org.openelisglobal.remote.source.uri=http://52.11.216.56:5001/fhir/
|
||||
org.openelisglobal.remote.source.updateStatus=true
|
||||
org.openelisglobal.remote.source.identifier=Practitioner/f9badd80-ab76-11e2-9e96-0800200c9a66
|
||||
org.openelisglobal.task.useBasedOn=true
|
||||
|
||||
org.openelisglobal.fhir.subscriber=http://fhir.openelis.org.remote:8080/fhir/
|
||||
org.openelisglobal.fhir.subscriber=http://52.11.216.56:5001/fhir/
|
||||
org.openelisglobal.fhir.subscriber.resources=Task,Patient,ServiceRequest,DiagnosticReport,Observation,Specimen,Practitioner,Encounter
|
||||
|
||||
#org.openelisglobal.facilitylist.fhirstore = http://localhost:4000/fhir/DEFAULT
|
||||
@@ -31,5 +31,5 @@ org.openelisglobal.fhir.subscriber.resources=Task,Patient,ServiceRequest,Diagnos
|
||||
facilitylist.schedule.fixedRate=864000000
|
||||
|
||||
#provider List
|
||||
org.openelisglobal.providerlist.fhirstore=http://fhir.openelis.org.remote:8080/fhir/
|
||||
org.openelisglobal.providerlist.fhirstore=http://52.11.216.56:5001/fhir/
|
||||
org.openelisglobal.requester.identifier=Practitioner/f9badd80-ab76-11e2-9e96-0800200c9a66
|
||||
Reference in new issue
Block a user