DOCS: documenting and cleaning work from tonight

.gitignore

@@ -6,4 +6,3 @@ pgdata/
 
 .gitsecret/keys/random_seed
 !*.secret
-db/backups/*.tar.gz

.gitsecret/paths/mapping.cfg

@@ -1 +1 @@
-db/backups/20200408.tar.gz:b4f973f283312971e9850e1b8cc58fcbdec518b76b6f7a52a5a3beb2fb45bdee
+db/backups/20200408.sql.gz:b365bf5fc13dbbe26d93e88f6523451b092999edc2a3f0680482f3a7e7369468

db/README.md

@@ -1,5 +1,17 @@
 # Database Management
 
+How to load a backup into your postgres docker container
+
+First, decrypt the pg_dump files.
+```
+git secret reveal
+```
+Second, restore the pg_dump into the container.
+```bash
+gunzip -c ./backups/version.sql.gz | docker exec -i hdhs_database_1 psql -U postgres -d app_db 
+```
+
+## Running Notes
 
 generate backups:
 ```bash
@@ -8,7 +20,7 @@ docker exec hdhs_database_1 pg_dump -U postgres app_db | gzip > backups/20200408
 
 Enter database container
 ```bash
-docker-compose -f dev-docker-compose.yml run database bash                             
+docker-compose -f dev-docker-compose.yml run database bash
 ```
 
 Enter DB inside container

db/backups/.gitignore

@@ -0,0 +1,3 @@
+*
+!.gitignore
+!*.secret

db/test_edit_distance.py

@@ -1,13 +0,0 @@
-import pandas as pd
-
-from fmp import FMP
-
-fmp_model = FMP("20200303_chihaiti", "hjohnson", "hjohnson")
-
-pk_visit_id = "pk_visit_id"
-fk_clinic_id = "fk_clinic_id"
-
-print(fmp_model.get_tablename_from_fieldname(pk_visit_id))  # expect this to be "visits"
-print(
-    fmp_model.get_tablename_from_fieldname(fk_clinic_id)
-)  # expect this to be "clinics"